LOCUS       XM_006234751            2822 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Meis homeobox 2 (Meis2), transcript
            variant X8, mRNA.
ACCESSION   XM_006234751
VERSION     XM_006234751.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006234751.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006234751.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2822
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2822
                     /gene="Meis2"
                     /note="Meis homeobox 2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 20 ESTs, 2 long SRA
                     reads, 3 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 39 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:311311"
                     /db_xref="RGD:1305198"
     CDS             69..1310
                     /gene="Meis2"
                     /codon_start=1
                     /product="homeobox protein Meis2 isoform X8"
                     /protein_id="XP_006234813.1"
                     /db_xref="GeneID:311311"
                     /db_xref="RGD:1305198"
                     /translation="MPNIPNATQLGRSQEEWWGNKREYDELPHYGGMDGVGVPASMYG
                     DPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNVMPASMGSAVNDALKRDKDAIYGH
                     PLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNP
                     ELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSD
                     HEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDN
                     SVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQD
                     TGLTILQVNNWFINARRRIVQPMIDQSNRAVSQGAAYSPEGQPMGSFVLDGQQHMGIR
                     PAGPMSGMGMNMGMDGQWHYM"
ORIGIN      
        1 ccggacctag taatccgcca gcagaggaag ggggccgcgg aattaaaacg aacaaaagct
       61 agagcgccat gccaaacatc cccaacgcga cccagttagg caggagccaa gaggagtggt
      121 ggggaaataa acgagaatac gatgagctgc cccattacgg cgggatggac ggagtagggg
      181 ttcctgcttc catgtacgga gaccctcacg cgccgcggcc gattcccccg gttcaccacc
      241 taaaccacgg gccgccgctc cacgccacgc agcactacgg cgcgcacgcc ccgcacccca
      301 atgtcatgcc agccagcatg ggatctgctg tcaacgacgc cttgaagaga gacaaggacg
      361 cgatctacgg gcacccgttg tttcctctgt tagcgctggt ctttgagaag tgcgagctgg
      421 cgacttgcac tccccgggaa cccggagtgg ccggcggaga cgtctgttcc tctgactcct
      481 tcaacgagga catcgcggtc ttcgccaagc aggttcgcgc cgaaaagcct cttttttcct
      541 caaatccaga gctggataat ttgatgatac aagcaataca agtgctaagg tttcatcttc
      601 tggagttaga aaaggtccac gaactgtgtg ataacttctg ccaccggtac attagctgtt
      661 tgaaggggaa aatgcccatt gacctcgtga ttgatgagag agacggaagc tccaagtcag
      721 atcatgaaga actttcaggc tcctccacaa atctcgccga ccacaaccct tcatcctggc
      781 gagaccacga tgatgcaacc tcaactcact cagcaggcac cccaggaccc tccagcgggg
      841 gccatgcttc ccagagtgga gacaacagca gtgagcaagg cgacgggcta gacaacagtg
      901 tagcttcacc tggcacaggt gatgacgacg atccagacaa ggacaaaaaa cgccagaaga
      961 aaagaggcat attccccaaa gtcgcgacaa atatcatgag agcgtggctc ttccagcatc
     1021 tcacacaccc gtacccttca gaagagcaga agaagcagtt agcacaagac acggggctga
     1081 caattctgca agtgaacaac tggtttatta atgccagaag aagaatagta cagcccatga
     1141 ttgaccagtc aaatcgagca gtgagccaag gagcagcgta tagtccagag ggtcagccta
     1201 tggggagctt tgtattggat ggtcagcaac acatggggat ccggcccgca ggacccatga
     1261 gtggaatggg catgaatatg ggcatggatg ggcaatggca ctacatgtaa ccttcgccat
     1321 gtaaagcaat cgcaaggcaa gggggaagtt tgcagagcat gccaggggac tacgtttctc
     1381 agggtggtcc agtgggaatg ggtatggccc agccgagtta cactcctccc cagatgaccc
     1441 cacaccctac tcagttaaga catggacccc caatgcattc atatttgcca agccatcccc
     1501 accacccagc catgatgatg cacggaggac cccctaccca ccctggaatg actatgtcag
     1561 cacagagccc cacaatgtta aattctgtag atcccaatgt tggcggacag gttatggaca
     1621 ttcatgccca atagtataag ggaactcaag gaagaaggaa acacacgcaa aaactattga
     1681 ctaagactct ccgaactttg accagatgtg acacttaata tgaaactcca gacagctgtg
     1741 attatttttt acttttgtca tttttcatca agcaacagag gaccaatggg acaagaacac
     1801 aaatgtgaag cgatgggggt catcgagaca attttgtcca tgcaaagatc ctctggagaa
     1861 agactccgag agttataact actgtagcat aaacataggg actaagttaa acttgtacat
     1921 ttctgttgat cactccgtta tgttgcctca aatagtttta gaagagaaaa aaatatatcc
     1981 ttgttttcca cactatgtgt gttgttccca aaagaatgac tgtcttggtt catcagtgaa
     2041 ttcactatcc agaagagaac tgtggtatat tttaaatctg ttgggccaat gagaaaagaa
     2101 ccacgctgcg gagagagatg gacacttggc tgaacctcat cactaactcc agcggctaga
     2161 atgtgttttc atgcccggcc tttgttcccc cgtccgtgtg tcctttagtt tcaaacagat
     2221 ctttatagtt tgtgcttcat aagccaattc ttattatgat tttgggggac tgttcttcaa
     2281 agagcttgcc agtgaagatt tagagacaaa gcgaagactt cttcaagtcc caagccttgg
     2341 ctatggacaa agcaatctta agttggacag cttcctcaac acgcgcacat gtgtgcgcga
     2401 gcgcacacac acacacacac acacacacac acacacacac acagaaatta ttcatggtca
     2461 ttgcaccata agattctatc aggaactcaa agcttggggg ataaaacgga gcaagagaat
     2521 actgtaacaa acttcgtaca gagttcggtc ttttaattgt ttcatgttag atattctatg
     2581 tgtttacctc aattgaaaaa aaaaaagaat gtttttgcta gtatcagatc tgctgtggaa
     2641 ttggtattgt atgtccatgg gatcctcttt tctcagcacg tgttcctcac tagaagaaaa
     2701 tgctgttacc tttaagcttt gtcaaattta cattaaaata cttgtatgag gactgtgacg
     2761 ttatgttaaa aaaaggtgtt aagtcacaaa atgcggtaat aaatatttca tttttgattt
     2821 tt
//
