LOCUS       XM_006234746            2726 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Meis homeobox 2 (Meis2), transcript
            variant X2, mRNA.
ACCESSION   XM_006234746
VERSION     XM_006234746.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006234746.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006234746.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2726
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2726
                     /gene="Meis2"
                     /note="Meis homeobox 2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 16 ESTs, 2 long
                     SRA reads, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 37 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:311311"
                     /db_xref="RGD:1305198"
     CDS             69..1538
                     /gene="Meis2"
                     /codon_start=1
                     /product="homeobox protein Meis2 isoform X2"
                     /protein_id="XP_006234808.1"
                     /db_xref="GeneID:311311"
                     /db_xref="RGD:1305198"
                     /translation="MPNIPNATQLGRSQEEWWGNKREYDELPHYGGMDGVGVPASMYG
                     DPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNVMPASMGSAVNDALKRDKDAIYGH
                     PLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNP
                     ELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSD
                     HEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDN
                     SVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQD
                     TGLTILQVNNWFINARRRIVQPMIDQSNRAVSQGAAYSPEGQPMGSFVLDGQQHMGIR
                     PAGLQSMPGDYVSQGGPVGMGMAQPSYTPPQMTPHPTQLRHGPPMHSYLPSHPHHPAM
                     MMHGGPPTHPGMTMSAQSPTMLNSVDPNVGGQVMDIHAQ"
ORIGIN      
        1 ccggacctag taatccgcca gcagaggaag ggggccgcgg aattaaaacg aacaaaagct
       61 agagcgccat gccaaacatc cccaacgcga cccagttagg caggagccaa gaggagtggt
      121 ggggaaataa acgagaatac gatgagctgc cccattacgg cgggatggac ggagtagggg
      181 ttcctgcttc catgtacgga gaccctcacg cgccgcggcc gattcccccg gttcaccacc
      241 taaaccacgg gccgccgctc cacgccacgc agcactacgg cgcgcacgcc ccgcacccca
      301 atgtcatgcc agccagcatg ggatctgctg tcaacgacgc cttgaagaga gacaaggacg
      361 cgatctacgg gcacccgttg tttcctctgt tagcgctggt ctttgagaag tgcgagctgg
      421 cgacttgcac tccccgggaa cccggagtgg ccggcggaga cgtctgttcc tctgactcct
      481 tcaacgagga catcgcggtc ttcgccaagc aggttcgcgc cgaaaagcct cttttttcct
      541 caaatccaga gctggataat ttgatgatac aagcaataca agtgctaagg tttcatcttc
      601 tggagttaga aaaggtccac gaactgtgtg ataacttctg ccaccggtac attagctgtt
      661 tgaaggggaa aatgcccatt gacctcgtga ttgatgagag agacggaagc tccaagtcag
      721 atcatgaaga actttcaggc tcctccacaa atctcgccga ccacaaccct tcatcctggc
      781 gagaccacga tgatgcaacc tcaactcact cagcaggcac cccaggaccc tccagcgggg
      841 gccatgcttc ccagagtgga gacaacagca gtgagcaagg cgacgggcta gacaacagtg
      901 tagcttcacc tggcacaggt gatgacgacg atccagacaa ggacaaaaaa cgccagaaga
      961 aaagaggcat attccccaaa gtcgcgacaa atatcatgag agcgtggctc ttccagcatc
     1021 tcacacaccc gtacccttca gaagagcaga agaagcagtt agcacaagac acggggctga
     1081 caattctgca agtgaacaac tggtttatta atgccagaag aagaatagta cagcccatga
     1141 ttgaccagtc aaatcgagca gtgagccaag gagcagcgta tagtccagag ggtcagccta
     1201 tggggagctt tgtattggat ggtcagcaac acatggggat ccggcccgca ggtttgcaga
     1261 gcatgccagg ggactacgtt tctcagggtg gtccagtggg aatgggtatg gcccagccga
     1321 gttacactcc tccccagatg accccacacc ctactcagtt aagacatgga cccccaatgc
     1381 attcatattt gccaagccat ccccaccacc cagccatgat gatgcacgga ggacccccta
     1441 cccaccctgg aatgactatg tcagcacaga gccccacaat gttaaattct gtagatccca
     1501 atgttggcgg acaggttatg gacattcatg cccaatagta taagggaact caaggaagaa
     1561 ggaaacacac gcaaaaacta ttgactaaga ctctccgaac tttgaccaga tgtgacactt
     1621 aatatgaaac tccagacagc tgtgattatt ttttactttt gtcatttttc atcaagcaac
     1681 agaggaccaa tgggacaaga acacaaatgt gaagcgatgg gggtcatcga gacaattttg
     1741 tccatgcaaa gatcctctgg agaaagactc cgagagttat aactactgta gcataaacat
     1801 agggactaag ttaaacttgt acatttctgt tgatcactcc gttatgttgc ctcaaatagt
     1861 tttagaagag aaaaaaatat atccttgttt tccacactat gtgtgttgtt cccaaaagaa
     1921 tgactgtctt ggttcatcag tgaattcact atccagaaga gaactgtggt atattttaaa
     1981 tctgttgggc caatgagaaa agaaccacgc tgcggagaga gatggacact tggctgaacc
     2041 tcatcactaa ctccagcggc tagaatgtgt tttcatgccc ggcctttgtt cccccgtccg
     2101 tgtgtccttt agtttcaaac agatctttat agtttgtgct tcataagcca attcttatta
     2161 tgattttggg ggactgttct tcaaagagct tgccagtgaa gatttagaga caaagcgaag
     2221 acttcttcaa gtcccaagcc ttggctatgg acaaagcaat cttaagttgg acagcttcct
     2281 caacacgcgc acatgtgtgc gcgagcgcac acacacacac acacacacac acacacacac
     2341 acacacagaa attattcatg gtcattgcac cataagattc tatcaggaac tcaaagcttg
     2401 ggggataaaa cggagcaaga gaatactgta acaaacttcg tacagagttc ggtcttttaa
     2461 ttgtttcatg ttagatattc tatgtgttta cctcaattga aaaaaaaaaa gaatgttttt
     2521 gctagtatca gatctgctgt ggaattggta ttgtatgtcc atgggatcct cttttctcag
     2581 cacgtgttcc tcactagaag aaaatgctgt tacctttaag ctttgtcaaa tttacattaa
     2641 aatacttgta tgaggactgt gacgttatgt taaaaaaagg tgttaagtca caaaatgcgg
     2701 taataaatat ttcatttttg attttt
//
