LOCUS       XM_039082451            3864 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus multiple EGF-like-domains 11 (Megf11),
            transcript variant X7, mRNA.
ACCESSION   XM_039082451
VERSION     XM_039082451.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039082451.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3864
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3864
                     /gene="Megf11"
                     /note="multiple EGF-like-domains 11; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, 7 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 50 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:691517"
                     /db_xref="RGD:1582797"
     CDS             210..3419
                     /gene="Megf11"
                     /codon_start=1
                     /product="multiple epidermal growth factor-like domains
                     protein 11 isoform X6"
                     /protein_id="XP_038938379.1"
                     /db_xref="GeneID:691517"
                     /db_xref="RGD:1582797"
                     /translation="MAPSTVGLLVVFLLQAALALNPEDPNVCSHWESYAVTVQESYAH
                     PFDQIYYTRCADILNWFKCTRHRISYKTAYRRGLRTMYRRRSQCCPGYYENGDFCIPL
                     CTEECMHGRCVSPDTCHCEPGWGGPDCSSGCDSEHWGPHCSNRCQCQNGALCNPITGA
                     CVCAPGFRGWRCEEFCAPGTHGKGCQLLCQCHHGASCDPRTGECLCAPGYTGVYCEEL
                     CPPGSHGAHCELRCPCQNGGTCHHITGECACPPGWTGAVCAQPCPPGTFGQNCSQDCP
                     CHHGGQCDHVTGQCHCTAGYMGDRCQEECPFGTFGFRCSQRCDCHNGGQCSPATGACE
                     CEPGYKGPSCQERLCPEGLHGPGCTSPCPCDTENTISCHPVTGACTCQPGWSGHYCNE
                     SCPAGYYGNGCQLPCTCQNGADCHSITGSCTCAPGFMGEVCAVPCAAGTYGPNCSSVC
                     SCSNGGTCSPVDGSCTCREGWQGLDCSLPCPSGTWGLNCNESCVCANGAACSPFDGSC
                     ACTPGWLGDSCELPCPDGTFGLNCSEHCDCSHADGCDPVTGHCCCLAGWTGIRCDSTC
                     PPGRWGPNCSVSCSCENGGSCSPVDGSCECAPGFRGPLCQRICPPGFYGHGCAQPCPL
                     CVHSRGPCHHVSGICECLPGFSGALCNQVCAGGHFGQDCAQLCSCANNGTCSPIDGSC
                     QCFPGWTGKDCSQACPSGFWGSACFHTCSCHNGASCSAEDGACHCTPGWTGLFCTQRC
                     PAAFFGKDCGHICQCQNGASCDHITGKCTCRTGFSGRHCEQRCAPGTFGYGCQQLCEC
                     MNNATCDHVTGTCYCSPGFKGIRCDQAALMMDELNPYTKISPALGAERHSVGAVTGII
                     LLLFLVVVLLGLFAWRRRRQKEKGRDLAPRVSYTPAMRMTSTDYSLSDLSQSSSHAQC
                     FSNASYHTLACGGPATSQASTLDRNSPTKLSNKSLDRDTAGWTPYSYVNVLDSHFQIS
                     ALEARYPPEDFYIELRHLSRHAEPHSPGTCGMDRRQNTYIMDKGFKGFCSDLSDLAWP
                     SPNQGEQLVHNSWGNGYQKWDEQDPGGIVFYKQENIQVE"
ORIGIN      
        1 cagggggtgg gggctgccgt ggcagcagtc gcagcggctc cagcctcctg cttgctcact
       61 cgttctcagt gcccggagcc ggcttcccgg ctcggggcgg ttcgcagctc ccgctcctgc
      121 ctggggacct gaaaccgctc cggctccggg ggataggatc gtgcgactgg ctggcccaag
      181 ccctgggcgc gccgtggaag cagggcctga tggcgccgtc cacggtgggc ctccttgttg
      241 tcttccttct gcaagcggct ctcgctctga accctgagga ccccaatgtg tgtagccact
      301 gggagagcta cgccgtgacc gtgcaggagt cttatgcaca cccctttgat cagatctact
      361 acacacgatg tgcagacatc ctcaactggt tcaagtgtac ccggcaccgg atcagctata
      421 agacggcata taggcgcggc ctccggacca tgtaccggcg gaggtcccaa tgctgccctg
      481 gctactatga gaatggagac ttctgcattc ctctgtgcac cgaggagtgt atgcatggcc
      541 gctgcgtctc cccggatacc tgccactgtg agcctggatg gggaggccct gactgttcca
      601 gtggctgtga cagcgagcac tggggtcccc actgcagcaa ccggtgtcag tgtcagaacg
      661 gcgccttgtg caaccctatc accggcgcct gcgtatgcgc ccccggcttc cgaggctggc
      721 gctgtgagga attctgcgcg cccggtactc acggcaaggg ctgccagctg ctctgtcagt
      781 gccaccacgg cgctagctgc gacccgcgca ctggcgagtg cctctgcgca ccaggctaca
      841 ccggcgttta ctgtgaggag ctgtgccccc ctgggagcca tggagctcac tgtgagctac
      901 gctgcccctg ccagaacgga ggcacctgcc accacatcac tggcgagtgt gcctgtcctc
      961 caggctggac gggagcagtg tgtgcccagc cctgcccacc agggaccttt ggccagaact
     1021 gtagtcagga ctgtccctgc caccatggag gccagtgtga ccatgtgact ggacaatgcc
     1081 actgtacagc tggatacatg ggggacaggt gccaagaaga atgtcccttt ggaactttcg
     1141 gtttccggtg ctctcagcgc tgtgactgcc acaatggagg tcaatgttca ccagccacag
     1201 gtgcctgtga gtgtgaacct ggctacaagg gccctagctg ccaggaacgg ctatgccccg
     1261 agggcctgca tggcccaggc tgcacctcgc cctgtccctg tgacactgag aacactatca
     1321 gctgccatcc agtcactgga gcttgtacct gccagccagg ctggtctggc cactactgca
     1381 atgagtcctg ccctgccggc tactatggca atggttgcca gctaccctgc acctgccaga
     1441 acggcgctga ctgccacagc atcactggga gctgcacttg tgctccagga ttcatgggag
     1501 aggtgtgtgc cgttccctgt gcagcaggga cctatggtcc caactgttca tctgtatgta
     1561 gctgtagcaa tggcggcacc tgctcccctg tggatggctc ctgcacctgc cgagaggggt
     1621 ggcagggcct ggactgctcc ctgccttgtc ccagtgggac ctggggcctg aactgcaatg
     1681 agagctgtgt ctgtgctaat ggggctgcct gcagcccctt tgatggctcc tgtgcatgta
     1741 ccccaggctg gctgggggac tcctgcgaac tgccctgccc ggatggcacg tttgggctga
     1801 actgcagtga gcactgtgac tgcagccatg ctgatggctg tgaccctgtc acaggccact
     1861 gctgctgcct ggcaggatgg acaggcatcc gctgtgatag cacatgtcct ccaggtcgct
     1921 ggggccccaa ctgttcagtg tcctgcagct gtgaaaacgg aggatcctgt tccccagtgg
     1981 acgggagctg cgagtgtgcc cctggcttcc gaggaccctt gtgtcagaga atctgcccac
     2041 caggattcta cggccatggc tgcgcccagc cttgtcctct ctgcgtgcac agcagggggc
     2101 cctgccatca cgtcagtggc atttgtgagt gcctgccagg attctctgga gccttgtgca
     2161 accaagtgtg tgctggaggg cactttgggc aggactgtgc ccagctctgt tcctgtgcca
     2221 acaacgggac ctgcagcccc attgatggct cctgtcaatg cttccctgga tggactggca
     2281 aggactgctc acaggcctgc ccatctgggt tctggggctc tgcctgcttc cacacatgca
     2341 gctgccacaa cggggcgagc tgcagcgccg aggatggggc ctgccactgc acccctggct
     2401 ggaccggact cttctgcacg cagcgttgcc ctgcagcatt ttttgggaag gattgtgggc
     2461 acatatgcca gtgtcagaat ggagccagct gtgaccacat cactgggaaa tgcacctgtc
     2521 gaacaggctt ctctgggcgc cactgtgaac agagatgtgc ccctggaacc tttggatacg
     2581 ggtgtcagca gctatgtgag tgcatgaaca atgccacttg tgaccatgtc actggtacct
     2641 gttactgcag cccgggattc aaaggaatca ggtgtgacca agctgccctc atgatggatg
     2701 agctgaatcc atacaccaag atcagtccag ctctgggagc agagcggcac tcggtgggtg
     2761 ctgtcacagg catcatcctc ctgttgttcc tggttgtggt gttgctgggc ctgtttgcct
     2821 ggcgacggag gcggcagaaa gagaaaggcc gtgacctggc tcctcgagtc tcctacaccc
     2881 cagccatgag gatgaccagc acagactact ctctctcaga tttgtctcaa agtagcagcc
     2941 atgcccagtg cttttccaat gccagctacc acacactggc gtgcgggggg cctgccacca
     3001 gccaggcaag cactctggac aggaacagcc ccaccaagct cagtaacaag tcccttgaca
     3061 gagacacagc aggctggacc ccctacagct atgtgaacgt gttagactcc catttccaga
     3121 tcagtgccct ggaggccagg tacccgcccg aggacttcta cattgaactt agacacctca
     3181 gccgccatgc tgagccacac tcaccaggca cttgtggaat ggacagacgt cagaacacat
     3241 acattatgga caaaggcttc aaaggtttct gttctgatct ttcagaccta gcatggccat
     3301 ctcctaacca aggagaacaa cttgtgcaca actcatgggg aaatggctat cagaagtggg
     3361 atgagcagga cccaggtggc attgtgttct acaagcaaga gaacatccag gttgagtgac
     3421 catcagcttg gtttaggatg tgcaaaaccc aggaaacctg tctgatgagg gaggccattc
     3481 ccaaactcca agccagccac aggcagtaat cacctggggg ctttattatg acaagtttct
     3541 gagggttctg ccttaaacca tccaaatgga ggcaaacacc atttcggtat gtgaggttgc
     3601 caacagaaga gcaattatac cacttagtca ctgtgaccca aagtctcagt ttctttctca
     3661 gtatggaatg gggactagaa agctcttcca gggcctttga ggctttgtga agaagtatga
     3721 ctcaatggag aatagctcag acaggccctg agattagcat ataagcacac ctcacctata
     3781 caccctgtca tcctgtgcat ggtgtttcag gtaactactt ttaaactcta aaccataaat
     3841 gtaaaataaa gccaatgaaa gcca
//
