LOCUS       NM_001398808            2237 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus mesenteric estrogen-dependent adipogenesis
            (Medag), transcript variant 1, mRNA.
ACCESSION   NM_001398808 XM_341029
VERSION     NM_001398808.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2237)
  AUTHORS   Zhang,H., Chen,X. and Sairam,M.R.
  TITLE     Novel genes of visceral adiposity: identification of mouse and
            human mesenteric estrogen-dependent adipose (MEDA)-4 gene and its
            adipogenic function
  JOURNAL   Endocrinology 153 (6), 2665-2676 (2012)
   PUBMED   22510272
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000012.1.
            
            On Dec 23, 2021 this sequence version replaced XM_341029.8.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360172.2407008.1,
                                           SRR22582419.1952901.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-452               JAXUCZ010000012.1  10670462-10670913   c
            453-562             JAXUCZ010000012.1  10658987-10659096   c
            563-675             JAXUCZ010000012.1  10653664-10653776   c
            676-961             JAXUCZ010000012.1  10653206-10653491   c
            962-2237            JAXUCZ010000012.1  10649526-10650801   c
FEATURES             Location/Qualifiers
     source          1..2237
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12p11"
     gene            1..2237
                     /gene="Medag"
                     /gene_synonym="RGD1307396"
                     /note="mesenteric estrogen-dependent adipogenesis"
                     /db_xref="GeneID:360757"
                     /db_xref="RGD:1307396"
     exon            1..452
                     /gene="Medag"
                     /gene_synonym="RGD1307396"
                     /inference="alignment:Splign:2.1.0"
     CDS             175..1086
                     /gene="Medag"
                     /gene_synonym="RGD1307396"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="mesenteric estrogen-dependent adipogenesis
                     protein isoform 1"
                     /protein_id="NP_001385737.1"
                     /db_xref="GeneID:360757"
                     /db_xref="RGD:1307396"
                     /translation="MATAACEPVARPSLTSISSGELRSLWTCDCELALLPLSQLLRLQ
                     PGAFQLRGEQLLVPGPGEPAAARGGFNVFGDGLVRLDGQLYRLSSYIKRYVELTNYCD
                     YKDYRETILSKPMLFFVNVQTKKDISKERTYAFLVNTRHPKIRRQIEQGMDMVISSVI
                     GESYRLQFDFQEVVRNFFPPGTIMLNGENLSFTYEFKADALFDFFYWFGLSNSTVKVH
                     GKVLNLTSTNPEKKETIKLFLEKMSEPLIRRSSFSDRKFSVTSRGSIDDVFNCNLSPR
                     SSVTEPLLAEFSFPSVLESEETSSQSL"
     exon            453..562
                     /gene="Medag"
                     /gene_synonym="RGD1307396"
                     /inference="alignment:Splign:2.1.0"
     exon            563..675
                     /gene="Medag"
                     /gene_synonym="RGD1307396"
                     /inference="alignment:Splign:2.1.0"
     exon            676..961
                     /gene="Medag"
                     /gene_synonym="RGD1307396"
                     /inference="alignment:Splign:2.1.0"
     exon            962..2237
                     /gene="Medag"
                     /gene_synonym="RGD1307396"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctttctccg tgtcctgctg cagcgctcct cgaaggtggg caaccttcag ggtgacaaga
       61 gggttcctga gctactactg aacgcagccc aaggcagccc aggacagacc acagatttaa
      121 ttctcccact tggcgacctt cagggtagaa aggggacaga gccatagctt gagtatggcc
      181 actgcagcgt gcgagcctgt ggccagaccc agcctaacct ccatttcgtc cggggagctg
      241 cgcagcctgt ggacgtgcga ctgcgagctg gccctgctgc ccctgtcgca gctgctccgc
      301 ctacagcctg gtgccttcca actgcgcggt gagcagctcc tggtgcccgg gcccggggaa
      361 cctgcggccg cacggggagg cttcaacgtc ttcggtgatg gcctagtgcg cctagatggc
      421 cagctctatc gcctcagcag ttacatcaag agatacgtgg aattgaccaa ctactgtgat
      481 tacaaagact acagggaaac gatactgagc aaacccatgc tgttctttgt taacgtgcag
      541 accaagaagg acatctcaaa agaaaggacc tacgcgtttc ttgtgaacac aaggcacccc
      601 aagataagaa gacagataga gcaagggatg gacatggtca tctcctctgt cattggagaa
      661 agctatagac ttcagtttga tttccaggaa gtagtgagga atttcttccc tccaggaacc
      721 atcatgttga atggggagaa tttgagtttc acctacgaat tcaaagcgga tgccctgttt
      781 gatttcttct actggtttgg gctcagcaat tccactgtaa aagtgcatgg aaaggttctg
      841 aacttgacca gtacgaaccc agaaaagaaa gaaacaatta agttattcct ggaaaaaatg
      901 agtgaacctc taatccgaag gagtagtttc tccgatcgga aatttagtgt cacatccaga
      961 ggttcaatag atgatgtttt taactgcaac ctgtcaccca gatcatcagt tacagaacca
     1021 cttttggcag aattctcatt tccaagtgtt ctggaatctg aagagacatc cagccaatct
     1081 ctctgactgg tctgaacatt ctgggtgttg tcccatcgag gtctgtggca gacagtgcgt
     1141 tgaaggggga agaggaaacg gggtggacgt gtccatcccg ttgccagcct ctggccctcc
     1201 aaggttctat agaggacact ttttcccatt tccctaggca cggtgccctg gcaggcccag
     1261 tggcttccat caggggtatg atgatgggat ggaaggactt tgtctctatg gtttagggtg
     1321 tcattgacat tgaacacttc tctgaagaat cggaggaatt ctcaggggca agcacccatg
     1381 aactttgctt agtaccctgg cactctggag accttcacgg caacctctgc gagagtcacc
     1441 tgactggaat gttcacccgt gatactccct ggaccccaga atggtccttc ctctgccacc
     1501 agcagcccca gcaagcctcg gggttaagct tttctcttgc aaatgtgtta ggtaaagcca
     1561 gtaccaatat ctctctggga aacaagtctg atgtccattc tgccagtggg atgaacattc
     1621 aagatactgg ctgctgagga ggcctccctg aaacataaag ccaggcagtg tgccaatcaa
     1681 ccagtgacaa gagaggccct cctccctgca gctaacctgg accagttggt gtttgaaatg
     1741 tgctttagca atcttaacat gagaagaaaa gcctggggga actaagccat taccaccacg
     1801 ggatactgaa catcggggtg ctcttccccc cgccccccca caactccagc agcattgact
     1861 gaaggggaag gaaattatcc aatctacata tttttgtttg catgagtggc tggacatggt
     1921 gtctgtaatt ctagcactcg ggggtgaagg cagtagaatg aggagttcaa gaccatcctt
     1981 gtctacatag ggagttcaag gccgacttgt tagatgaata cagaagactg ataaaacaag
     2041 cccacatcat agcacatgtg aattcccacg tagatgcata agaaggcaga tttatggacc
     2101 ccttgtagca tcttttccaa actttaagaa aaatattccc atcccacatg tttcgatggc
     2161 gacgttgatg gcctgccatt tgtacccgaa atattatcta atacatatgc acaattaaaa
     2221 ctttccttag cattcaa
//
