LOCUS       NM_001106237            1297 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus mediator complex subunit 29 (Med29), mRNA.
ACCESSION   NM_001106237 XM_001078289 XM_214868
VERSION     NM_001106237.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1297)
  AUTHORS   Poss ZC, Ebmeier CC and Taatjes DJ.
  TITLE     The Mediator complex and transcription regulation
  JOURNAL   Crit Rev Biochem Mol Biol 48 (6), 575-608 (2013)
   PUBMED   24088064
  REMARK    Review article
REFERENCE   2  (bases 1 to 1297)
  AUTHORS   Tomomori-Sato C, Sato S, Parmely TJ, Banks CA, Sorokina I, Florens
            L, Zybailov B, Washburn MP, Brower CS, Conaway RC and Conaway JW.
  TITLE     A mammalian mediator subunit that shares properties with
            Saccharomyces cerevisiae mediator subunit Cse2
  JOURNAL   J Biol Chem 279 (7), 5846-5851 (2004)
   PUBMED   14638676
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473979.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_214868.4, XM_001078289.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DV213508.1, CK842059.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN06621351, SAMN12840115
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..1297
                     /gene="Med29"
                     /gene_synonym="Ixl; RGD1311009"
                     /note="mediator complex subunit 29"
                     /db_xref="GeneID:292751"
                     /db_xref="RGD:1311009"
     exon            1..267
                     /gene="Med29"
                     /gene_synonym="Ixl; RGD1311009"
                     /inference="alignment:Splign:2.1.0"
     CDS             55..654
                     /gene="Med29"
                     /gene_synonym="Ixl; RGD1311009"
                     /note="intersex-like"
                     /codon_start=1
                     /product="mediator of RNA polymerase II transcription
                     subunit 29"
                     /protein_id="NP_001099707.1"
                     /db_xref="GeneID:292751"
                     /db_xref="RGD:1311009"
                     /translation="MAAPQPQAAAVSSAAGVSGPGSAGGPGPQQQPQPTQLVGAAQSG
                     LLQQQQQDFDPVQRYKMLIPQLKESLQTLMKVAAQNLIQNTNIDNGQKSSDGPIQRFD
                     KCLEEFYALCDQLELCLRLAHECLSQSCDSAKHSPTLVPTATKPDAVQPDSLPYPQYL
                     AVIKAQITCAKDIHTALLDCANKVTGKTTAPSTGPGGSL"
     exon            268..326
                     /gene="Med29"
                     /gene_synonym="Ixl; RGD1311009"
                     /inference="alignment:Splign:2.1.0"
     exon            327..411
                     /gene="Med29"
                     /gene_synonym="Ixl; RGD1311009"
                     /inference="alignment:Splign:2.1.0"
     exon            412..1297
                     /gene="Med29"
                     /gene_synonym="Ixl; RGD1311009"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agccaccgga gcagacgcgc ttgtgacgtg tttccggtgt tctagcggag gaaaatggct
       61 gcgccccagc cacaggctgc ggcggtttcc tctgctgccg gtgtgtctgg tccgggttct
      121 gctggtggtc ctggtcccca gcaacagccg caaccaaccc aactggtggg tgctgcccag
      181 agcgggctcc tgcagcagca gcagcaggac ttcgatcctg tgcagcgcta caagatgctc
      241 atcccgcaat tgaaggagag tctccagact ttgatgaaag ttgctgccca gaacctgatt
      301 cagaacacta acattgacaa cggacagaaa agcagtgacg gacccataca gcgctttgac
      361 aagtgtctgg aggagtttta cgcactctgt gatcagctgg aactctgctt gcgtctggcc
      421 cacgagtgcc tctcacagag ctgtgacagc gccaagcact ctccaacact ggtacccaca
      481 gccacaaagc cagatgcagt gcagccagac agcctgccct acccgcagta cctggctgtc
      541 atcaaagctc agattacctg tgccaaagac attcacactg ccctgctgga ctgtgccaac
      601 aaggtcactg gcaagactac tgcaccctcg actggccctg gaggcagcct ctgaggtctt
      661 ggtggaggga ggggcagaga atgaagtctg gcctgaggga aaacatggtt cctgttactg
      721 atttatttgt cctgccacag taagtagctg gaaccagcag ggggcagcag agacttgcag
      781 gcaacacagg cctcaacccc acctctgttg cctccaccca ctctgctccc tgatggaggg
      841 tggacccccc acacgcacac tcctagctgc tgattaccag tgttctgaag acttcccatc
      901 tcccacctgg ccctgggcgc tgactgggcg gtttaaacct tcctcagtct gtcccagtgt
      961 atggactctt tttttttttt tttttttttt tttttaaccc atttttctgc tcccgtcctc
     1021 cctttctcta ccagtccgct tttgttgccc ccagtgccta actgggatcc tatgtatata
     1081 agaggagcaa aatgcccggg ttgcctgggg ctacaggaag gcactttctg gctcacaaat
     1141 gtgcatgaat gtaggccctg acctcagcac acacacaacc taggagcagt ttgggtccac
     1201 attggaccct gcgtcagcag ggctctctag cagggggagg tgtgggggca ttgtgcaatg
     1261 tgtggggagg cctgctcaac aggactcctt ggtctca
//
