LOCUS       XM_006239009            2275 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus mitochondrial trans-2-enoyl-CoA
            reductase (Mecr), transcript variant X1, mRNA.
ACCESSION   XM_006239009
VERSION     XM_006239009.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_006239009.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2275
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2275
                     /gene="Mecr"
                     /gene_synonym="Nrbf1"
                     /note="mitochondrial trans-2-enoyl-CoA reductase; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 ESTs, 2 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 32 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:29470"
                     /db_xref="RGD:3208"
     CDS             361..1254
                     /gene="Mecr"
                     /gene_synonym="Nrbf1"
                     /codon_start=1
                     /product="enoyl-[acyl-carrier-protein] reductase,
                     mitochondrial isoform X1"
                     /protein_id="XP_006239071.1"
                     /db_xref="GeneID:29470"
                     /db_xref="RGD:3208"
                     /translation="MLAAPINPSDINMIQGNYGLLPKLPAVGGNEGVGQVIAVGSSVS
                     GLKPGDWVIPANAGLGTWRTEAVFSEEALIGVPKDIPLQSAATLGVNPCTAYRMLVDF
                     EQLQPGDSVIQNASNSGVGQAVIQIASALGLKTINVIRDRPDIKKLTDRLKDLGADYV
                     LTEEELRMPETKNIFKDLPLPRLALNCVGGKSSTELLRHLAPGGTMVTYGGMAKQPVT
                     ASVSMLIFKDLKLRGFWLSQWKKNHSPDEFKELILFLCNLIRQGQLTAPAWSGIPLQD
                     YQQALEASMKPFVSSKQILTM"
ORIGIN      
        1 agcgccgggt tctgtcagtg ctggaagcgg catgttggtc agccggcgac tgacaggggc
       61 gcgagcccgg gcacctctgc ttgcgagtct cctcgaggct tggtgccgcc agggcaggac
      121 cacctcctcc tactccgctt tctcggagcc gtcgcatgtg cgggcgctgg tctatggcaa
      181 ccacggggat ccagccaagg tcatccacta taaaagcaga acaatagtct gcaagctatt
      241 gaaatgggat ggaagctggc cggcctataa agcacttggc agggagcctg gctggtgaac
      301 actcactgac tgaagaacct ggagctcact gctgtggaag gatctgacgt ccatgtgaag
      361 atgctggcag cccctatcaa tccatctgac ataaatatga tccaagggaa ctatggcctc
      421 cttcccaagc tgcctgctgt tggagggaat gaaggtgttg gacaggtgat agcagtgggc
      481 agcagtgtgt ctggattgaa gccaggagat tgggtgatcc cagcaaatgc tggtttggga
      541 acctggcgga ctgaggcggt gttcagtgag gaagcgctga ttggagtccc taaggacatc
      601 cctctccaga gtgctgccac cctaggtgtc aacccctgca cagcctacag gatgttggtg
      661 gactttgaac agctacaacc aggggactct gtcatccaga atgcgtccaa cagtggagta
      721 gggcaagcag tcattcagat cgcctcagcc cttggcctaa agaccatcaa cgtgatccga
      781 gacagacctg acatcaagaa gctaactgac agactgaagg atctaggagc tgattatgtc
      841 ctcacagagg aggagctaag gatgcccgag accaaaaaca tcttcaagga cctgccgctg
      901 ccccgactgg ctctcaactg tgtcggtggg aagagttcca cagagctgct ccggcaccta
      961 gcgcccggag gaaccatggt gacctatgga ggaatggcca agcagcctgt aacagcctct
     1021 gtgagtatgc tcatttttaa ggacctcaaa cttcgtggct tttggttgtc ccagtggaag
     1081 aagaaccata gtccagatga gttcaaggag ctgattctct ttctctgcaa cctcatccgc
     1141 caaggccagc tcacagcccc tgcctggtcc gggattccac tgcaggacta ccagcaggct
     1201 ttggaagcct ccatgaagcc ttttgtgtct tcgaagcaga ttctcactat gtgattactc
     1261 cagaggacca ggaggaaagc aggagaggca ggccagcaag attggctggc tgctggccct
     1321 ccatgaggac tccagactgc ctcaccctca ctgcctcttc ctaccaggag ggtgggaggc
     1381 caaccccagg gtccctaata aaccctggac ttcccaagta gaggatgaag agtacagtca
     1441 tgcctgtgga ggaatgatgt gcacctgctc tgcctctcta cctagtgccc agtcactgcc
     1501 tgaccaccct gaaagtagag gctatgagac tgctgctaag tgcagaagtc actctctgcc
     1561 cttagcatcg ctgagtctgg cagaaaggga aaggtggcta acctctcctg gagtgtgggg
     1621 ctctgtccag ggcaagggga tctgctgcct gggtgagtac aggctgagat cattaacact
     1681 tcagagaaca caggatagca ggtgtctagg ccaccttctg ggaatgacac ttgtaactaa
     1741 gagaataaac atcacacctg tggttctcag ccagggcacg ggcatttcta accccagagg
     1801 gacacttttt gctatcacag cttggggaag gaattatttg cctcaactgg gcagagatca
     1861 atactgttaa atattttaca gccagttata acacacacct gcaattccag caattgggag
     1921 gcttaagtta ggtggattgc cgtaagtcgg aagcaagacc gtgtctcaaa caattttctt
     1981 acaaaggcta ctggtgagat aagaatgctt atctagcatg cattaggcct cggattccat
     2041 tccaataact gctaaaagga caaatacatt gcacaggacc aactcccaca aagaatcatc
     2101 ctgcccagat gttcctagtg ctgctgttga gaacacctgc attaaacccc aggtggagcc
     2161 gtcatgactg gcgctaagca gaaggcacgc agagctgtaa acacctgagt tctgggcaag
     2221 gcttgtttga ggtacgagtt gactgaaaaa taagttggtt tcatctgagc aagaa
//
