LOCUS       NM_001401628            1890 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus magnesium-dependent phosphatase 1 (Mdp1),
            transcript variant 1, mRNA.
ACCESSION   NM_001401628 XM_039093129
VERSION     NM_001401628.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1890)
  AUTHORS   Fortpied,J., Maliekal,P., Vertommen,D. and Van Schaftingen,E.
  TITLE     Magnesium-dependent phosphatase-1 is a
            protein-fructosamine-6-phosphatase potentially involved in
            glycation repair
  JOURNAL   J Biol Chem 281 (27), 18378-18385 (2006)
   PUBMED   16670083
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000015.1.
            
            On Feb 16, 2022 this sequence version replaced XM_039093129.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360190.830325.1,
                                           SRR26360172.2684047.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-118               JAXUCZ010000015.1  33121700-33121817   c
            119-179             JAXUCZ010000015.1  33121530-33121590   c
            180-290             JAXUCZ010000015.1  33121349-33121459   c
            291-398             JAXUCZ010000015.1  33120627-33120734   c
            399-506             JAXUCZ010000015.1  33120434-33120541   c
            507-1890            JAXUCZ010000015.1  33118944-33120327   c
FEATURES             Location/Qualifiers
     source          1..1890
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p13"
     gene            1..1890
                     /gene="Mdp1"
                     /gene_synonym="Mdp-1; RGD1311147"
                     /note="magnesium-dependent phosphatase 1"
                     /db_xref="GeneID:290230"
                     /db_xref="RGD:1311147"
     exon            1..118
                     /gene="Mdp1"
                     /gene_synonym="Mdp-1; RGD1311147"
                     /inference="alignment:Splign:2.1.0"
     CDS             82..792
                     /gene="Mdp1"
                     /gene_synonym="Mdp-1; RGD1311147"
                     /EC_number="3.1.3.48"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="magnesium-dependent phosphatase 1 isoform 1"
                     /protein_id="NP_001388557.1"
                     /db_xref="GeneID:290230"
                     /db_xref="RGD:1311147"
                     /translation="MTRLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQD
                     IRLYPEVPEILGRLQSLGVPVAAASRTSEIEGANQLLELFDLGKYFIQREIYPGSKVT
                     HFERLRNKTGVPFSQMIFFDDENRNIIDVGKLGTESLLRGRYLHSHTGWNESSNVNSR
                     IRDICKSPSWTLRSGPVDKPHYSVKLKRNQGSLVRSTCNVLKCPRVTIRVLSQYGLFP
                     FFFSFLLFFFKDLFIYYI"
     exon            119..179
                     /gene="Mdp1"
                     /gene_synonym="Mdp-1; RGD1311147"
                     /inference="alignment:Splign:2.1.0"
     exon            180..290
                     /gene="Mdp1"
                     /gene_synonym="Mdp-1; RGD1311147"
                     /inference="alignment:Splign:2.1.0"
     exon            291..398
                     /gene="Mdp1"
                     /gene_synonym="Mdp-1; RGD1311147"
                     /inference="alignment:Splign:2.1.0"
     exon            399..506
                     /gene="Mdp1"
                     /gene_synonym="Mdp-1; RGD1311147"
                     /inference="alignment:Splign:2.1.0"
     exon            507..1890
                     /gene="Mdp1"
                     /gene_synonym="Mdp-1; RGD1311147"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctctgtggcg cgcccgccgc ctacttggcc accatagagt tggggttcgt tcagcgccaa
       61 gtttgagtct gtgggtggat catgacgcga ctgccaaagc ttgcggtttt tgatctggat
      121 tacacgctct ggcctttctg ggttgataca cacgtagacc ccccattcca caagagcagc
      181 gatggaactg tacgagatag gcggggacag gacatccgat tgtacccgga ggtgccggag
      241 atcttgggaa gattgcagag ccttggagtg ccagtcgccg ctgcttcacg gacaagtgag
      301 atagaagggg ccaaccaact cctggagctc tttgaccttg gcaaatactt tattcagcgg
      361 gaaatctacc caggcagcaa agtgacacac tttgagaggt tgcgcaacaa gactggagtt
      421 cctttttctc agatgatctt ctttgatgat gagaatcgga atatcataga tgttggcaaa
      481 cttggtactg agtcactact gagggggcgt tacctgcatt cacatacagg atggaatgag
      541 tcttcaaatg ttaactcaag gattagagac atttgcaaaa gcccaagctg gactctgagg
      601 tccggccctg tagataagcc tcattacagt gtaaaactga aaagaaatca aggaagcctt
      661 gtcaggagca cttgtaatgt attaaagtgt ccacgtgtga ccatcagggt tttatcacag
      721 tatgggttgt ttccattttt cttttctttc cttctttttt tttttaaaga tttatttatt
      781 tattacatat gagtacactg tagctgtccc cagatacacc agaagagggc atcagatccc
      841 attacagatg gctgtgagca tcgtgtggtt gccgggattt gaactcagga cctctggaag
      901 agcaggcagt gctcttaacc gctgagccat ccctccagcc ggttcccatt tttctagcgt
      961 gtaaactgga gtgtccggat tagagtgcga aagatcagaa tgcatcaggt tgtcccctta
     1021 cgttggaacc catcccaagt ctcccttcaa ctgtgtcaga taatgggcgc cacaacgctg
     1081 cacatctcct tgtaggaacc gaaagctaat actgtttggg agtaggttgc agtcggcctt
     1141 tttccataga agtaagtaat ggaggagtga gccagcccta gtgtgaggct tcgtccctct
     1201 gaagtttatt tagggcgtgg ggaggggagt taagagagta gtagaggcag agaaaggcag
     1261 gggtgggggg gaaatagagg aatagaggct ggccatgagc tcgtggagag agaagggagt
     1321 taaggaatgg gaagagagca ggagcaagaa ggccaatagc ccctctgagg ctttaatatt
     1381 gcctactgac gatgtcacag ccatatcctg gaatggccga ggccattctc agaatgatga
     1441 taatctcgga ggaagacagg caaacagagg gacagagggg ggagaaatgg caatgagtgg
     1501 acttggcaga gtcttcagga gctgtgaccc caggagacac tgggctgcct gggaggtact
     1561 ggccagaagg gaatgggagc agcacatgcc aggcaggaag aggcccagga gagaggctga
     1621 cccaaaaacc tggaccaagc ctggcgctct gttgccagag gccaaccttg ttcaactgcc
     1681 ttgcctcagc ctgtctcagc ctgcctcagc cttgcctcag cctgcctcta gcaggactga
     1741 gtatggatgt gaaccgaagg tgatctggta attgttaact cctgtagcac aggcctgagg
     1801 gaattggttt ccaggaggct gcgtccaatc ttttctaaaa ttttgttgct tacgtggttt
     1861 gaataaaaga gatctaaagt gaagaagaaa
//
