LOCUS       NM_001109301            1616 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus MyoD family inhibitor (Mdfi), mRNA.
ACCESSION   NM_001109301 XM_001064387 XM_576512
VERSION     NM_001109301.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1616)
  AUTHORS   Yachie,N., Petsalaki,E., Mellor,J.C., Weile,J., Jacob,Y., Verby,M.,
            Ozturk,S.B., Li,S., Cote,A.G., Mosca,R., Knapp,J.J., Ko,M., Yu,A.,
            Gebbia,M., Sahni,N., Yi,S., Tyagi,T., Sheykhkarimli,D., Roth,J.F.,
            Wong,C., Musa,L., Snider,J., Liu,Y.C., Yu,H., Braun,P.,
            Stagljar,I., Hao,T., Calderwood,M.A., Pelletier,L., Aloy,P.,
            Hill,D.E., Vidal,M. and Roth,F.P.
  TITLE     Pooled-matrix protein interaction screens using Barcode Fusion
            Genetics
  JOURNAL   Mol Syst Biol 12 (4), 863 (2016)
   PUBMED   27107012
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1616)
  AUTHORS   Kusano,S. and Raab-Traub,N.
  TITLE     I-mfa domain proteins interact with Axin and affect its regulation
            of the Wnt and c-Jun N-terminal kinase signaling pathways
  JOURNAL   Mol Cell Biol 22 (18), 6393-6405 (2002)
   PUBMED   12192039
REFERENCE   3  (bases 1 to 1616)
  AUTHORS   Snider,L., Thirlwell,H., Miller,J.R., Moon,R.T., Groudine,M. and
            Tapscott,S.J.
  TITLE     Inhibition of Tcf3 binding by I-mfa domain proteins
  JOURNAL   Mol Cell Biol 21 (5), 1866-1873 (2001)
   PUBMED   11238923
REFERENCE   4  (bases 1 to 1616)
  AUTHORS   Kraut,N., Snider,L., Chen,C.M., Tapscott,S.J. and Groudine,M.
  TITLE     Requirement of the mouse I-mfa gene for placental development and
            skeletal patterning
  JOURNAL   EMBO J 17 (21), 6276-6288 (1998)
   PUBMED   9799236
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473987.2.
            
            [WARNING] On Jul 27, 2024 this sequence was replaced by
            NM_001109301.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001064387.1, XM_576512.2.
            
            ##Evidence-Data-START##
            CDS exon combination :: BC158727.1 [ECO:0000331]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q12"
     gene            1..1616
                     /gene="Mdfi"
                     /gene_synonym="RGD1560271"
                     /note="MyoD family inhibitor"
                     /db_xref="GeneID:501097"
                     /db_xref="RGD:1560271"
     exon            1..292
                     /gene="Mdfi"
                     /gene_synonym="RGD1560271"
                     /inference="alignment:Splign:2.1.0"
     exon            293..379
                     /gene="Mdfi"
                     /gene_synonym="RGD1560271"
                     /inference="alignment:Splign:2.1.0"
     CDS             304..1047
                     /gene="Mdfi"
                     /gene_synonym="RGD1560271"
                     /codon_start=1
                     /product="myoD family inhibitor"
                     /protein_id="NP_001102771.1"
                     /db_xref="GeneID:501097"
                     /db_xref="RGD:1560271"
                     /translation="MSQVSGQCPSRCDAPHGVPSAALDPAQTMSLLPGLEVVARSTHP
                     AEASSEEGSQEEAVPSMPQDGGLGVHQALNSTDLDVPTEAVTRQPQGNPQGCTPLLPN
                     GSGHDHLSEPGGAGHAGNGALGGTKAHRKLQTHPSLGSQAGRKSKGSTRSASQVPLQA
                     QEDCCVHCILSCLFCEFLTLCNIVLDCATCGSCSSEDSCLCCCCCGSGECADCDLPCD
                     LDCGILDACCESADCLEICMECCGLCFSS"
     exon            380..562
                     /gene="Mdfi"
                     /gene_synonym="RGD1560271"
                     /inference="alignment:Splign:2.1.0"
     exon            563..790
                     /gene="Mdfi"
                     /gene_synonym="RGD1560271"
                     /inference="alignment:Splign:2.1.0"
     exon            791..1616
                     /gene="Mdfi"
                     /gene_synonym="RGD1560271"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaggagagac tgaggagcag cttttgaagg caggtgaggc ccggcctacc ggctcaggta
       61 agccaggaag aatgcagcag cagccaaacc ctcccgcggg cgcgtcgcag tgactcagcc
      121 gctaccagga aggaggagtg ctcccaaact ctgcgacgcc cccagacagc agccagatct
      181 ccgaggctct ggggcgccaa gtcccccgca gcaagcatcc agacatccag ggcgggaccc
      241 cctcccgtcc cgctttcctc ccagcccagc cacccctgcc catcccgggg acgtcccagg
      301 ccgatgtccc aggtgagcgg tcagtgccct tctcgctgcg acgcgcctca tggagtcccc
      361 agcgctgccc tggatccagc ccagaccatg tccctcctcc ctgggctgga ggtagtagca
      421 agatccactc accctgcaga ggcatcgtca gaagagggct cccaggagga ggcagtaccc
      481 tccatgcccc aagacggtgg tcttggggtt caccaggctc taaacagcac tgacctcgat
      541 gtccccacag aagctgtgac gcgtcagcct caagggaacc cccaaggctg caccccacta
      601 ctgccaaatg gctccggcca cgaccacctc tcagaaccag gcggtgccgg gcatgcgggg
      661 aacggtgctc tgggcgggac caaggcccac cggaagttgc agacgcatcc atctctcggc
      721 agccaggccg gaaggaagag caaaggcagc acccggtcag cctcacaggt tcccctccag
      781 gctcaggaag attgctgtgt ccactgcata ctgtcctgtc tcttctgtga gttcctgacc
      841 ctctgcaaca tcgtcctgga ctgcgccacc tgcggctcct gcagctccga ggactcctgt
      901 ctctgctgct gctgctgtgg gtccggcgag tgtgcggact gcgacctgcc ctgcgacctg
      961 gactgcggca tcctggatgc ctgctgcgag tcggcagact gcttggagat atgcatggag
     1021 tgttgcggac tctgcttctc ctcctgatgc cacagggtgg tcccagagct gccgcacgga
     1081 gcctgatggc tcccctgacc ccgggcgggc ccccttagaa tcccaagcca gatgtgagaa
     1141 ggcgggacgc tgagaggggc ccgcctcagc cgcgaacagg tctgccttca gacgcataac
     1201 ctggccccct cggtgcgtga ccaggaacac ggcgtataga gcctggtggg gcagagccag
     1261 ttagagctgc caagactcca gaacactgtg aacggtaggg gagggtgggg caggaatggg
     1321 aggcccatgt ccttctctac ctctgctcca ggtgcctgcc tccctcagcc tcccccagct
     1381 ttgaggacag aaaatgtgaa aaggcacctg tcccacccat tgtcggcccc cgctcttccc
     1441 cccctccccc agctcattca ctgggtcttg tccgggccta acccatatgg tgaccaagag
     1501 gacgggggtt tgggacgggt gtgggtgggt ggggacaata tggaaaagac tggaaggagg
     1561 tagagggagg gtctgttctt ttcattgctg taaataaaga tatccgttca atctcc
//
