LOCUS       NM_001134602            1153 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus mast cell-expressed membrane protein 1 (Mcemp1),
            mRNA.
ACCESSION   NM_001134602 XM_001058473 XM_573339
VERSION     NM_001134602.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1153)
  AUTHORS   Jian,R., Yang,M. and Xu,F.
  TITLE     Lentiviral-mediated silencing of mast cell-expressed membrane
            protein 1 promotes angiogenesis of rats with cerebral ischemic
            stroke
  JOURNAL   J Cell Biochem 120 (10), 16786-16797 (2019)
   PUBMED   31104315
  REMARK    GeneRIF: Lentiviral-mediated silencing of mast cell-expressed
            membrane protein 1 promotes angiogenesis of rats with cerebral
            ischemic stroke.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000012.1.
            
            On Mar 29, 2023 this sequence version replaced NM_001134602.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643284.15306.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN06680412, SAMN06680413
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            RefSeq Select criteria           :: based on manual assertion,
                                                expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-83                JAXUCZ010000012.1  6520267-6520349
            84-167              JAXUCZ010000012.1  6520562-6520645
            168-299             JAXUCZ010000012.1  6521956-6522087
            300-350             JAXUCZ010000012.1  6522224-6522274
            351-506             JAXUCZ010000012.1  6522367-6522522
            507-560             JAXUCZ010000012.1  6523149-6523202
            561-1153            JAXUCZ010000012.1  6523288-6523880
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12p12"
     gene            1..1153
                     /gene="Mcemp1"
                     /gene_synonym="RGD1565374"
                     /note="mast cell-expressed membrane protein 1"
                     /db_xref="GeneID:498128"
                     /db_xref="RGD:1565374"
     exon            1..83
                     /gene="Mcemp1"
                     /gene_synonym="RGD1565374"
                     /inference="alignment:Splign:2.1.0"
     CDS             29..574
                     /gene="Mcemp1"
                     /gene_synonym="RGD1565374"
                     /codon_start=1
                     /product="mast cell-expressed membrane protein 1"
                     /protein_id="NP_001128074.2"
                     /db_xref="GeneID:498128"
                     /db_xref="RGD:1565374"
                     /translation="MQASASQEKNRRKPGHSEGAHNPEYENIAFRNRDQPKPSQSTPP
                     QQVKFKPSPDTAQVPPWLHRSIMMLYVLLALVFLFCIILSALALVKNFQMSKELWTLK
                     EELSNVSNTVWNIQTLQNQQKSIWEAVQRDIREAKSSLGTVKSSIQTGNDRLKTVPED
                     ITQIKKTLEALEKKIQPKPSK"
     exon            84..167
                     /gene="Mcemp1"
                     /gene_synonym="RGD1565374"
                     /inference="alignment:Splign:2.1.0"
     exon            168..299
                     /gene="Mcemp1"
                     /gene_synonym="RGD1565374"
                     /inference="alignment:Splign:2.1.0"
     exon            300..350
                     /gene="Mcemp1"
                     /gene_synonym="RGD1565374"
                     /inference="alignment:Splign:2.1.0"
     exon            351..506
                     /gene="Mcemp1"
                     /gene_synonym="RGD1565374"
                     /inference="alignment:Splign:2.1.0"
     exon            507..560
                     /gene="Mcemp1"
                     /gene_synonym="RGD1565374"
                     /inference="alignment:Splign:2.1.0"
     exon            561..1153
                     /gene="Mcemp1"
                     /gene_synonym="RGD1565374"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggtaatctac atgaatcaac ccagaagaat gcaggcgtcg gcctcccagg aaaagaaccg
       61 gaggaagcca ggccatagtg aaggtgctca caatcctgag tatgagaaca tagccttcag
      121 aaacagggac cagcccaaac ccagccaatc gacaccccca caacaagtca agttcaagcc
      181 gtccccggac acagcccagg tccccccttg gttgcacaga agcatcatga tgctgtatgt
      241 tctcctcgct ctcgtctttt tattctgcat catcctctct gccttggccc tggtgaaaaa
      301 ctttcaaatg tccaaggagc tgtggacttt gaaagaagag ctttcgaatg tttcaaacac
      361 ggtgtggaac atacagactc tccagaacca gcaaaagagt atttgggaag ctgttcagag
      421 agacatcagg gaggccaaga gtagccttgg cacggtcaag agcagcatcc agaccggaaa
      481 tgacaggctg aagacagtgc cagaagatat aacccaaatc aagaaaaccc ttgaggcgct
      541 ggagaagaag atacagccca agcccagtaa atgagaggac actgcagtca cacctgtgag
      601 gactccaaat ggcgcctgct ggtgaagatg gcaaatgggg tgcccagctt gagtgtgaac
      661 ctgccatgca tcctcatata aaaaaattct ccatctgaga attgggaaca agtgttgaag
      721 aggcgtgtat gcaaatgaat gctttgcagc acatggagtt tccatgtatt caaggagaag
      781 gtttgatggt ggaaagagaa catggaagtt acagcaggca tgactcttta tgggccacag
      841 aggtgtatgc cctggcgtat ataggcatgt cctggttggt agctgttccc atgaggtccc
      901 caaagtgtga gtgacgtgtg ggacgttcct cctcattatc ttgaccatgt ctgtgtgcaa
      961 ctggtttatt ttgtatgtgt gtcactgcag tggtgggtaa gggacatcat cctggtgatg
     1021 tgtcatggca caggtcactc ctagtgggct tggccatgcc agcttgtggg ttcagagcat
     1081 gtacacaaat gcagccatcg gtttctacac ttgtatttat gattcatgaa gataaacgcc
     1141 aagggaaatg ata
//
