LOCUS       XM_039096570            2394 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus myelin basic protein (Mbp), transcript
            variant X5, mRNA.
ACCESSION   XM_039096570
VERSION     XM_039096570.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2394
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2394
                     /gene="Mbp"
                     /gene_synonym="Mbps"
                     /note="myelin basic protein; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     mRNAs, 259 ESTs, 8 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     65 samples with support for all annotated introns"
                     /db_xref="GeneID:24547"
                     /db_xref="RGD:3054"
     CDS             25..900
                     /gene="Mbp"
                     /gene_synonym="Mbps"
                     /codon_start=1
                     /product="Golli-Mbp isoform X4"
                     /protein_id="XP_038952498.1"
                     /db_xref="GeneID:24547"
                     /db_xref="RGD:3054"
                     /translation="MGNHSGKRELASEKASKDGEIHRGEAEKKRSVGKLSQTASEDSD
                     VFGEADAIQNNGTSAEDTAVTDSKHTADPKNNWQGAHPADPGNRPHLIRLFSRDAPGR
                     EDNTFKDRPSESDELQTIQEDPTAASEGLDVMASQKRPSQRHGSKYLATASTMDHARH
                     GFLPRHRDTGILDSIGRFFSGDRGAPKRGSGKDSHTRTTHYGSLPQKSQRTQDENPVV
                     HFFKNIVTPRTPPPSQGKGAEGQKPGFGYGGRASDYKSAHKGFKGAYDAQGTLSKIFK
                     LGGRDSRSGSPMARR"
ORIGIN      
        1 cttgaacacc cccactgggt cgccatggga aaccactctg gaaagcgaga attagcatct
       61 gagaaggcca gtaaggatgg tgagattcac cgaggagagg ctgaaaaaaa gagaagcgtt
      121 ggcaagcttt ctcagaccgc ctcagaagac agtgatgtgt ttggggaggc agatgcgatc
      181 cagaacaatg ggacctcggc cgaggacaca gcggtgacag actccaagca cacagcagac
      241 ccaaagaata actggcaggg tgcccaccca gctgacccag ggaaccgccc ccacttgatc
      301 cgcctctttt cccgagatgc cccgggaagg gaggacaaca ccttcaaaga caggccctca
      361 gagtccgacg agcttcagac catccaagaa gatcccacag cagcttccga aggcctggat
      421 gtgatggcat cacagaagag accctcacag cgacacggat ccaagtactt ggccacagca
      481 agtaccatgg accatgcccg gcatggcttc ctcccaaggc acagagacac gggcatcctt
      541 gactccatcg ggcgcttctt tagcggtgac aggggtgcgc ccaagcgggg ctctggcaag
      601 gactcacaca caagaactac ccactacggc tccctgcccc agaagtcgca gaggacccaa
      661 gatgaaaacc cagtagtcca cttcttcaag aacattgtga cacctcgtac accccctcca
      721 tcccaaggaa agggggccga ggggcagaag ccaggatttg gctacggagg cagagcttcc
      781 gactataaat cggctcacaa gggattcaag ggggcctacg acgcccaggg cacgctttcc
      841 aaaatcttta agctgggagg aagagacagc cgctctggat ctcccatggc aagacgctga
      901 gagcctccct gctcagcctt cccgaatcct gccctcggct tcttaatata actgccttaa
      961 acgtttaatt ctacttgcac caaatagcta gttagagcag accctctctt aatcccgtgg
     1021 ggctgtgaac gcggcggggc caggcccacg gcaccctgac tggctaaaac tgtttgtccc
     1081 tttttatttg aagattgagt ttcctcgggg tcttctctgc cccgacttgc tccccgtgta
     1141 ccttggtcga ctccggaggt tcaggtgcac ggacaccctt tcaagttcac ccctactcca
     1201 tcctcagact ttcttttcac ggcgaggcgc acccctccag cttccgtggg cactgcggat
     1261 agacaggcac accgccaagg agccagagag catggcgcag gggactgtgt ggtccaggct
     1321 tcctttgttt tctttcccct aaagagcttt gtttttccta acaggatcag acagtcttgg
     1381 agtggcttac acaacggggg cttgtggtat gtgagcacag gctgggcagc tgtgagagtc
     1441 cagagtgggg tggccctggg gacgcttcca ggccagcggt tccctgcacc ccaccagctg
     1501 atttcgagcg tggcagaggg aaggaaaggg gcgagcgggc tgggcaatgg acccgacagg
     1561 aaacggggac ttaggggaac acgctggaga tgccatgtgt ggctgccgaa ggtcaccatc
     1621 tctcctcagt ggctccccag agcaggtgct tttaagaacc ctgtttcctc tcagagccca
     1681 gggagagtcc aaggacatgg cgcatcagga agtgggactg caggagttct ctggtggcct
     1741 cgtgctgtcc ctctggccac ttctcacttt agggtggtca gcggcagctc gccatggcag
     1801 tgcccattgg tgcacactaa cctcagtgga aaagtaacca ttccctgcct cttagaaaga
     1861 actcattctt agttttagga gggttcctgt cgctgaatca agtcgctgcc ctggatgcag
     1921 ggctggcctg ggcgaccctc cagggatgag gagctcagaa ttccagtctt ctaatgtcca
     1981 cggacacctc cccatccctc taacgtactg actatgtctt ttgatttagc atgtcttcta
     2041 tagaccttcc aaagagaccc acactggcac tgtcaccccc taggagggaa ggtgatggtt
     2101 gatgtagccc gacgcgcatc ttgttaatcc gttctaattc cgaggagagt gtgggtttaa
     2161 gataacacct attaatgcat tgccacaata atgtgggggt aagagaaacg cagggacgaa
     2221 acttccagaa acaaaccctc cagatcgttc cacaggagtg ttcgccctcc ggtgtgactg
     2281 aacgaccgac cttgcccatg gcttcatcca gacagcacag ctgcagtatg gctggacaga
     2341 agcacctact gttcttggat attgaaataa aataataaac ttgcaatgat cttt
//
