LOCUS       XM_039096569            2692 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus myelin basic protein (Mbp), transcript
            variant X4, mRNA.
ACCESSION   XM_039096569
VERSION     XM_039096569.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039096569.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2692
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2692
                     /gene="Mbp"
                     /gene_synonym="Mbps"
                     /note="myelin basic protein; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     mRNAs, 232 ESTs, 11 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     1 sample with support for all annotated introns"
                     /db_xref="GeneID:24547"
                     /db_xref="RGD:3054"
     CDS             212..1198
                     /gene="Mbp"
                     /gene_synonym="Mbps"
                     /codon_start=1
                     /product="myelin basic protein isoform X3"
                     /protein_id="XP_038952497.1"
                     /db_xref="GeneID:24547"
                     /db_xref="RGD:3054"
                     /translation="MGNHSGKRELASEKASKDGEIHRGEAEKKRSVGKLSQTASEDSD
                     VFGEADAIQNNGTSAEDTAVTDSKHTADPKNNWQGAHPADPGNRPHLIRLFSRDAPGR
                     EDNTFKDRPSESDELQTIQEDPTAASEGLDVMASQKRPSQRHGSKYLATASTMDHARH
                     GFLPRHRDTGILDSIGRFFSGDRGAPKRGSGKVPWLKQSRSPLPSHARSRPGLCHMYK
                     DSHTRTTHYGSLPQKSQRTQDENPVVHFFKNIVTPRTPPPSQGKGRGLSLSRFSWGAE
                     GQKPGFGYGGRASDYKSAHKGFKGAYDAQGTLSKIFKLGGRDSRSGSPMARR"
ORIGIN      
        1 gaggaagact caggaacaga agagatgatt gttcctacaa ggtagaggtg ctgggacagg
       61 gacacaggcc tcttagccct taatgaatac aggttcctga ctcttacaag actgaggtgt
      121 ggtgtgtgta ccagactgga tggggtgctc atgagccaac agccagctgc tacttcttgg
      181 ttaaactctt gaacaccccc actgggtcgc catgggaaac cactctggaa agcgagaatt
      241 agcatctgag aaggccagta aggatggtga gattcaccga ggagaggctg aaaaaaagag
      301 aagcgttggc aagctttctc agaccgcctc agaagacagt gatgtgtttg gggaggcaga
      361 tgcgatccag aacaatggga cctcggccga ggacacagcg gtgacagact ccaagcacac
      421 agcagaccca aagaataact ggcagggtgc ccacccagct gacccaggga accgccccca
      481 cttgatccgc ctcttttccc gagatgcccc gggaagggag gacaacacct tcaaagacag
      541 gccctcagag tccgacgagc ttcagaccat ccaagaagat cccacagcag cttccgaagg
      601 cctggatgtg atggcatcac agaagagacc ctcacagcga cacggatcca agtacttggc
      661 cacagcaagt accatggacc atgcccggca tggcttcctc ccaaggcaca gagacacggg
      721 catccttgac tccatcgggc gcttctttag cggtgacagg ggtgcgccca agcggggctc
      781 tggcaaggta ccctggctaa agcagagccg gagccctctg ccttctcatg cccgcagccg
      841 tcccgggctg tgccacatgt acaaggactc acacacaaga actacccact acggctccct
      901 gccccagaag tcgcagagga cccaagatga aaacccagta gtccacttct tcaagaacat
      961 tgtgacacct cgtacacccc ctccatccca aggaaagggg agaggcctgt ccctcagcag
     1021 atttagctgg ggggccgagg ggcagaagcc aggatttggc tacggaggca gagcttccga
     1081 ctataaatcg gctcacaagg gattcaaggg ggcctacgac gcccagggca cgctttccaa
     1141 aatctttaag ctgggaggaa gagacagccg ctctggatct cccatggcaa gacgctgaga
     1201 gcctccctgc tcagccttcc cgaatcctgc cctcggcttc ttaatataac tgccttaaac
     1261 gtttaattct acttgcacca aatagctagt tagagcagac cctctcttaa tcccgtgggg
     1321 ctgtgaacgc ggcggggcca ggcccacggc accctgactg gctaaaactg tttgtccctt
     1381 tttatttgaa gattgagttt cctcggggtc ttctctgccc cgacttgctc cccgtgtacc
     1441 ttggtcgact ccggaggttc aggtgcacgg acaccctttc aagttcaccc ctactccatc
     1501 ctcagacttt cttttcacgg cgaggcgcac ccctccagct tccgtgggca ctgcggatag
     1561 acaggcacac cgccaaggag ccagagagca tggcgcaggg gactgtgtgg tccaggcttc
     1621 ctttgttttc tttcccctaa agagctttgt ttttcctaac aggatcagac agtcttggag
     1681 tggcttacac aacgggggct tgtggtatgt gagcacaggc tgggcagctg tgagagtcca
     1741 gagtggggtg gccctgggga cgcttccagg ccagcggttc cctgcacccc accagctgat
     1801 ttcgagcgtg gcagagggaa ggaaaggggc gagcgggctg ggcaatggac ccgacaggaa
     1861 acggggactt aggggaacac gctggagatg ccatgtgtgg ctgccgaagg tcaccatctc
     1921 tcctcagtgg ctccccagag caggtgcttt taagaaccct gtttcctctc agagcccagg
     1981 gagagtccaa ggacatggcg catcaggaag tgggactgca ggagttctct ggtggcctcg
     2041 tgctgtccct ctggccactt ctcactttag ggtggtcagc ggcagctcgc catggcagtg
     2101 cccattggtg cacactaacc tcagtggaaa agtaaccatt ccctgcctct tagaaagaac
     2161 tcattcttag ttttaggagg gttcctgtcg ctgaatcaag tcgctgccct ggatgcaggg
     2221 ctggcctggg cgaccctcca gggatgagga gctcagaatt ccagtcttct aatgtccacg
     2281 gacacctccc catccctcta acgtactgac tatgtctttt gatttagcat gtcttctata
     2341 gaccttccaa agagacccac actggcactg tcacccccta ggagggaagg tgatggttga
     2401 tgtagcccga cgcgcatctt gttaatccgt tctaattccg aggagagtgt gggtttaaga
     2461 taacacctat taatgcattg ccacaataat gtgggggtaa gagaaacgca gggacgaaac
     2521 ttccagaaac aaaccctcca gatcgttcca caggagtgtt cgccctccgg tgtgactgaa
     2581 cgaccgacct tgcccatggc ttcatccaga cagcacagct gcagtatggc tggacagaag
     2641 cacctactgt tcttggatat tgaaataaaa taataaactt gcaatgatct tt
//
