LOCUS       XM_017600847            2351 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus myelin basic protein (Mbp), transcript
            variant X7, mRNA.
ACCESSION   XM_017600847
VERSION     XM_017600847.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017600847.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2351
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2351
                     /gene="Mbp"
                     /gene_synonym="Mbps"
                     /note="myelin basic protein; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     mRNAs, 214 ESTs, 4 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     43 samples with support for all annotated introns"
                     /db_xref="GeneID:24547"
                     /db_xref="RGD:3054"
     CDS             27..857
                     /gene="Mbp"
                     /gene_synonym="Mbps"
                     /codon_start=1
                     /product="Golli-Mbp isoform X6"
                     /protein_id="XP_017456336.1"
                     /db_xref="GeneID:24547"
                     /db_xref="RGD:3054"
                     /translation="MGNHSGKRELASEKASKDGEIHRGEAEKKRSVGKLSQTASEDSD
                     VFGEADAIQNNGTSAEDTAVTDSKHTADPKNNWQGAHPADPGNRPHLIRLFSRDAPGR
                     EDNTFKDRPSESDELQTIQEDPTAASEGLDVMASQKRPSQRHGSKYLATASTMDHARH
                     GFLPRHRDTGILDSIGRFFSGDRGAPKRGSGKVPWLKQSRSPLPSHARSRPGLCHMYK
                     DSHTRTTHYGSLPQKSQRTQDENPVVHFFKNIVTPRTPPPSQGKGGRDSRSGSPMARR
                     "
ORIGIN      
        1 ctcttgaaca cccccactgg gtcgccatgg gaaaccactc tggaaagcga gaattagcat
       61 ctgagaaggc cagtaaggat ggtgagattc accgaggaga ggctgaaaaa aagagaagcg
      121 ttggcaagct ttctcagacc gcctcagaag acagtgatgt gtttggggag gcagatgcga
      181 tccagaacaa tgggacctcg gccgaggaca cagcggtgac agactccaag cacacagcag
      241 acccaaagaa taactggcag ggtgcccacc cagctgaccc agggaaccgc ccccacttga
      301 tccgcctctt ttcccgagat gccccgggaa gggaggacaa caccttcaaa gacaggccct
      361 cagagtccga cgagcttcag accatccaag aagatcccac agcagcttcc gaaggcctgg
      421 atgtgatggc atcacagaag agaccctcac agcgacacgg atccaagtac ttggccacag
      481 caagtaccat ggaccatgcc cggcatggct tcctcccaag gcacagagac acgggcatcc
      541 ttgactccat cgggcgcttc tttagcggtg acaggggtgc gcccaagcgg ggctctggca
      601 aggtaccctg gctaaagcag agccggagcc ctctgccttc tcatgcccgc agccgtcccg
      661 ggctgtgcca catgtacaag gactcacaca caagaactac ccactacggc tccctgcccc
      721 agaagtcgca gaggacccaa gatgaaaacc cagtagtcca cttcttcaag aacattgtga
      781 cacctcgtac accccctcca tcccaaggaa agggaggaag agacagccgc tctggatctc
      841 ccatggcaag acgctgagag cctccctgct cagccttccc gaatcctgcc ctcggcttct
      901 taatataact gccttaaacg tttaattcta cttgcaccaa atagctagtt agagcagacc
      961 ctctcttaat cccgtggggc tgtgaacgcg gcggggccag gcccacggca ccctgactgg
     1021 ctaaaactgt ttgtcccttt ttatttgaag attgagtttc ctcggggtct tctctgcccc
     1081 gacttgctcc ccgtgtacct tggtcgactc cggaggttca ggtgcacgga caccctttca
     1141 agttcacccc tactccatcc tcagactttc ttttcacggc gaggcgcacc cctccagctt
     1201 ccgtgggcac tgcggataga caggcacacc gccaaggagc cagagagcat ggcgcagggg
     1261 actgtgtggt ccaggcttcc tttgttttct ttcccctaaa gagctttgtt tttcctaaca
     1321 ggatcagaca gtcttggagt ggcttacaca acgggggctt gtggtatgtg agcacaggct
     1381 gggcagctgt gagagtccag agtggggtgg ccctggggac gcttccaggc cagcggttcc
     1441 ctgcacccca ccagctgatt tcgagcgtgg cagagggaag gaaaggggcg agcgggctgg
     1501 gcaatggacc cgacaggaaa cggggactta ggggaacacg ctggagatgc catgtgtggc
     1561 tgccgaaggt caccatctct cctcagtggc tccccagagc aggtgctttt aagaaccctg
     1621 tttcctctca gagcccaggg agagtccaag gacatggcgc atcaggaagt gggactgcag
     1681 gagttctctg gtggcctcgt gctgtccctc tggccacttc tcactttagg gtggtcagcg
     1741 gcagctcgcc atggcagtgc ccattggtgc acactaacct cagtggaaaa gtaaccattc
     1801 cctgcctctt agaaagaact cattcttagt tttaggaggg ttcctgtcgc tgaatcaagt
     1861 cgctgccctg gatgcagggc tggcctgggc gaccctccag ggatgaggag ctcagaattc
     1921 cagtcttcta atgtccacgg acacctcccc atccctctaa cgtactgact atgtcttttg
     1981 atttagcatg tcttctatag accttccaaa gagacccaca ctggcactgt caccccctag
     2041 gagggaaggt gatggttgat gtagcccgac gcgcatcttg ttaatccgtt ctaattccga
     2101 ggagagtgtg ggtttaagat aacacctatt aatgcattgc cacaataatg tgggggtaag
     2161 agaaacgcag ggacgaaact tccagaaaca aaccctccag atcgttccac aggagtgttc
     2221 gccctccggt gtgactgaac gaccgacctt gcccatggct tcatccagac agcacagctg
     2281 cagtatggct ggacagaagc acctactgtt cttggatatt gaaataaaat aataaacttg
     2341 caatgatctt t
//
