LOCUS       XM_017594011            2913 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus microtubule affinity regulating kinase
            3 (Mark3), transcript variant X4, mRNA.
ACCESSION   XM_017594011
VERSION     XM_017594011.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017594011.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017594011.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2913
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2913
                     /gene="Mark3"
                     /note="microtubule affinity regulating kinase 3; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 24 ESTs, 1 long SRA read, 18 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 46 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:170577"
                     /db_xref="RGD:619883"
     CDS             285..2315
                     /gene="Mark3"
                     /codon_start=1
                     /product="MAP/microtubule affinity-regulating kinase 3
                     isoform X4"
                     /protein_id="XP_017449500.2"
                     /db_xref="GeneID:170577"
                     /db_xref="RGD:619883"
                     /translation="MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRM
                     KEKEARAKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGSK
                     LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL
                     RGKYRIPFYMSTDCENLLKRFLVLNPVKRGTLEQIMKDRWINAGHEEEELKPFVEPEL
                     DISDQKRIDIMVGMGYSQEEIQESLSKMKYDEITATYLLLGRKSAELDASDSSSSSNL
                     SLAKVRPSSDLSNSTGQSPHHKGQRSVSSSQKQRRYSDHAGPAIPSVVAYPKRSQTST
                     ADSDLKEDGVPSRKSGSSAVGGKGIAPASPMLGNASNPNKADIPERKKSPAVPSSNAA
                     SGGMTRRNTYVCSERCAADRHSVIQNGKESSLTEVFAYAASPASLCATSTCRLRHQRS
                     MSVSASGHPKMVLPPIDSEGDTFKAITTPDQRTPVASTHSISSATTPDRIRFPRGTAS
                     RSTFHGQPRERRTATYNGPPASPSLSHEATPLSQTRSRGSTNLFSKLTSKLTRSRNVS
                     SEQKDENREAKPRSLRFTWSMKTTSSMDPSDMMREIRKVLDANTCDYEQRERFLLFCV
                     HGDGHAESLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL"
ORIGIN      
        1 gcggccatct tgagtctcac atttcacatg gagatgggag gcaagaagtc acctcccgca
       61 ccgggcgctc tggagctcgg tgtagaaact caatagcttc ctgtgcagat gaacagcctc
      121 atattggaaa ctacagacta ttgaaaacaa tcggcaaggg gaactttgca aaagtgaaat
      181 tggcgagaca catcctcaca ggcagagagg ttgcaataaa gataattgac aaaactcagt
      241 tgaatccaac aagtctacag aagctcttca gagaagtaag aataatgaag attttaaatc
      301 acccaaacat agtgaaattg ttcgaggtca ttgaaacgga aaaaacactc tacttaatca
      361 tggaatatgc aagtggaggt gaagtatttg actatttggt tgcacatgga agaatgaagg
      421 aaaaagaagc aagagctaag tttagacaga ttgtgtccgc agtacagtat tgccaccaaa
      481 aacggatcgt tcacagagac ctcaaggctg aaaatctgtt attagatgcg gatatgaaca
      541 ttaaaatagc agattttggt tttagcaatg aatttactgt tggcagtaaa ctagacacgt
      601 tttgtggtag tcctccatat gcagcccctg agctcttcca gggcaagaag tatgacgggc
      661 cggaagtgga cgtgtggagt ctcggcgtca ttctgtacac cctagtcagt gggtcacttc
      721 cctttgatgg tcagaacctg aaggaactga gagagagagt cctccgaggg aagtacagaa
      781 tccctttcta catgtccaca gactgtgaga accttctcaa gcgcttcctg gtgctgaacc
      841 cagttaaacg cggcactctg gagcaaatca tgaaggacag gtggatcaat gcaggtcatg
      901 aggaagagga gcttaagcca tttgtcgaac cagaactaga catctcagac cagaagagaa
      961 tagatattat ggtgggaatg ggatattccc aagaagaaat acaagaatct cttagtaaaa
     1021 tgaaatacga tgaaatcaca gcgacgtact tgttactggg gaggaagtct gcagagctgg
     1081 acgctagtga ctccagttct agcagcaacc tttcacttgc taaggtgcgg ccaagcagtg
     1141 acctcagcaa tagcactggc cagtctcctc atcacaaagg gcagaggagt gtgtcttcaa
     1201 gtcagaagca gagacggtac agtgaccacg ctggaccagc tattccttca gttgtggcat
     1261 atccgaagag gagtcagacc agcactgcag atagtgacct caaagaagat ggagttccct
     1321 cccgaaaatc aggcagcagt gctgtaggag gaaaggggat tgcccctgcc agtcccatgc
     1381 ttgggaatgc aagcaatccc aataaagctg atattcccga gcgcaagaaa agccctgctg
     1441 tccccagtag taatgcagca tctggtggga tgactcggag gaacacttac gtgtgcagtg
     1501 agagatgtgc agcggacaga cattcagtga ttcagaacgg caaagaaagc agcctgacag
     1561 aagtgttcgc ttacgcagct agccctgcct cactctgtgc cacatctacc tgtcggctga
     1621 gacatcagag gtcgatgtcc gtgtcagcct ctgggcaccc caagatggtg ttacctccaa
     1681 tagacagtga aggagatacc ttcaaggcta tcaccactcc agatcagagg actccagttg
     1741 cttctacaca cagtattagc agtgcgacaa ccccagatcg catccgcttc ccaaggggca
     1801 cagccagccg tagcactttc cacgggcagc ctcgagagcg gcgaaccgca acatataatg
     1861 gccccccagc ctcacccagc ttgtcccatg aagccacacc gctgtcccag acgcgaagca
     1921 gaggctccac taatcttttt agcaaactaa cttctaaact caccagaagt cgcaatgtat
     1981 cttcggaaca aaaggatgag aacagagagg ccaaacctcg gtccctgcgc ttcacctgga
     2041 gcatgaaaac cactagttcc atggatccca gtgacatgat gcgggagatc cgcaaagtgc
     2101 tggacgccaa tacctgcgac tatgagcaga gggagcgctt cctgctcttc tgtgtccatg
     2161 gcgacgggca cgctgagagc ctggtgcagt gggagatgga agtctgtaag ctgccaagac
     2221 tgtctctgaa tggggtccgg tttaagcgga tatcagggac atccatcgct ttcaaaaaca
     2281 ttgcttccaa aattgccaac gagctaaagc tgtaacccag taattatggt gtaaattaag
     2341 tagcaagcaa aggtgtttcc agagcactga tggaaatgtg tagagtaata tttaggcaat
     2401 aacgtgcatc ttctaaatca tgacattaaa gtctgaggac gagagcgggc ctgggagcga
     2461 aggctggcct tccctgcgaa tgcactacat taaagtctgt gaccccgtgc ctctgtcttg
     2521 tttccattgc cctgggggtc agagtgtgac accgtctgca ccacgagacc ctgtgtgtgc
     2581 tgtgagtgga tggctgtgtg ggagccgtct cctcgaactg gcagccagca ttactagtac
     2641 ctctgcggga gatcatttgg tgctaaaaca ttacaattgc caagaaggaa aatactgaat
     2701 tactgctaag aattaacctt aagactagtt gataattaat acaggtttac agttcatgcc
     2761 tgtggttttg tgtttgtttc gtgatttttt ttttttttgc tttttttttt ttttagtgca
     2821 aaaggtttaa atttatagtt gtgaacattg cttgtgtgtg tttttctaag tagattcaca
     2881 agataattaa aaattcactt tttctcagta aaa
//
