LOCUS       XM_008768272            2266 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus microtubule-associated protein tau
            (Mapt), transcript variant X8, mRNA.
ACCESSION   XM_008768272
VERSION     XM_008768272.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008768272.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008768272.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2266
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2266
                     /gene="Mapt"
                     /gene_synonym="MAPT_0N4R; Mtapt; pTau; RNPTAU; Tau"
                     /note="microtubule-associated protein tau; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 13 ESTs, 7 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     109 samples with support for all annotated introns"
                     /db_xref="GeneID:29477"
                     /db_xref="RGD:69329"
     CDS             149..2209
                     /gene="Mapt"
                     /gene_synonym="MAPT_0N4R; Mtapt; pTau; RNPTAU; Tau"
                     /codon_start=1
                     /product="microtubule-associated protein tau isoform X8"
                     /protein_id="XP_008766494.1"
                     /db_xref="GeneID:29477"
                     /db_xref="RGD:69329"
                     /translation="MAEPRQEFDTMEDQAGDYTMLQDQEGDMDHGLKESPPQPPADDG
                     SEEPGSETSDAKSTPTAEDVTAPLVEERAPDKQATAQSHTEIPEGTTAEEAGIGDTPN
                     MEDQAAGHVTQEPQKVEIFSQSLLVEPGRREGQAPDSGISDWTHQQVPSMSGAPLPPQ
                     GLREATHQPLGTRPEDVERSHPASELLWQESPQKEAWGKDRLGSEEEVDEDITMDESS
                     QESPPSQASLAPGTATPQARSVSASGVSGETTSIPGFPAEGSIPLPADFFSKVSAETQ
                     ASPPEGPGTGPSEEGHEAAPEFTFHVEIKASAPKEQDLEGATVVGAPAEEQKARGPSV
                     GKGTKEASLLEPTDKQPAAGLPGRPVSRVPQLKARVAGVSKDRTGNDEKKAKGADGKT
                     GAKIATPRGAATPGQKGTSNATRIPAKTTPSPKTPPGSGEPPKSGERSGYSSPGSPGT
                     PGSRSRTPSLPTPPTREPKKVAVVRTPPKSPSASKSRLQTAPVPMPDLKNVRSKIGST
                     ENLKHQPGGGKVQIINKKLDLSNVQSKCGSKDNIKHVPGGGSVQIVYKPVDLSKVTSK
                     CGSLGNIHHKPGGGQVEVKSEKLDFKDRVQSKIGSLDNITHVPGGGNKKIETHKLTFR
                     ENAKAKTDHGAEIVYKSPVVSGDTSPRHLSNVSSTGSIDMVDSPQLATLADEVSASLA
                     KQGL"
ORIGIN      
        1 cacagtctcc gccacccacc agctccagca ccagcagcag cgccggcgcc accgcccacc
       61 ttctgctgtc gccgccgcca caaccacctt cccctccgct gtcctcttct gtcctcgcct
      121 cctgtcgatt atcaggcttt gaagcagcat ggctgaaccc cgccaggagt ttgacacaat
      181 ggaagaccag gccggagatt acactatgct ccaagaccaa gaaggagaca tggaccatgg
      241 cttaaaagag tctcccccac agcccccagc cgatgatgga tcagaagaac cagggtcgga
      301 gacctctgat gctaagagca ctccaactgc tgaagacgtg actgcgcccc tagtggaaga
      361 gagagctccc gacaagcagg cgactgccca gtcccacacg gagatcccag aaggcaccac
      421 agctgaagaa gcaggcatcg gagacacccc gaacatggag gaccaagctg ctgggcatgt
      481 gactcaagaa ccgcagaagg tcgagatttt ctcacaaagt ttgcttgtcg aaccagggcg
      541 tcgtgaaggc caggccccag attcagggat ctcagactgg acccaccaac aggtgcctag
      601 catgtctggg gctcccctcc cgccacaagg cctcagagag gctacacacc aacctttggg
      661 aacaagacct gaggatgtag agagaagtca cccggcctct gagctgctgt ggcaagagtc
      721 acctcagaag gaagcctggg gcaaagacag gctgggaagt gaggaggagg tggacgaaga
      781 catcaccatg gatgaatcgt cccaggaatc ccctccctcc caagcctccc tggcccctgg
      841 cacggccacc cctcaggccc gctccgtttc tgcttccggg gtctctgggg agaccactag
      901 catccctgga ttcccagctg agggttccat cccacttcct gctgatttct tctccaaagt
      961 ctccgcagag acccaggcct caccgccaga agggcctggc acggggccct cggaggaagg
     1021 gcacgaggct gcccctgagt tcacattcca cgtggaaatc aaagccagcg cgccgaagga
     1081 acaggatttg gaaggggcta cagtggtggg ggcccctgca gaggagcaaa aggcccgagg
     1141 cccctctgtg ggaaagggca cgaaagaggc tagccttctg gaaccaactg acaagcaacc
     1201 tgcagccggc ctgccaggaa ggccagtcag tcgggttcct caacttaaag ctcgagtggc
     1261 cggcgtaagc aaagacagga caggaaatga cgagaagaaa gccaagggcg ccgatggcaa
     1321 aacgggggcg aagatcgcca cacctcgggg agcagccact ccgggccaga aaggcacatc
     1381 caatgccacc aggatcccag ccaagaccac acccagccca aagactcctc caggatcagg
     1441 tgaaccacca aaatccggag aacgaagcgg ctacagcagc cccggctcgc ccggaacccc
     1501 tggcagtcgc tcccgtaccc catccctacc aacgccgccc acccgagagc ccaaaaaggt
     1561 ggcagtggtt cgcactcccc ctaagtcacc gtctgccagt aagagccgcc tacagactgc
     1621 ccctgtgccc atgccagacc taaagaacgt caggtccaag attggctcca ctgagaacct
     1681 gaagcaccag ccgggaggcg gcaaggtgca gataattaat aagaagctgg atcttagcaa
     1741 cgtccagtcc aagtgtggct caaaggacaa tatcaaacac gtcccgggcg gaggcagtgt
     1801 gcaaatagtc tacaagccag tggacctgag caaggtgacc tccaagtgtg gttccttagg
     1861 gaacatccat cacaagccag gaggtggcca ggtagaagta aaatcagaga agctggactt
     1921 caaggataga gtccagtcga agattggctc cttggataac atcacccatg tccctggagg
     1981 agggaataag aagattgaaa cccacaagct gaccttcagg gagaatgcca aagccaagac
     2041 agaccatgga gcagaaatcg tgtacaagtc acctgtggtg tctggggaca catctccacg
     2101 gcacctcagc aacgtctcct ccacgggcag catcgacatg gtggactctc cacagcttgc
     2161 cacgttagcc gatgaagtgt ccgcctcttt ggccaagcag ggtttgtgat caggcccctg
     2221 gggccgtcac tgatcatgga gagaagagag agtgagagtg tggaaa
//
