LOCUS       XM_039085036            2820 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus mitogen-activated protein kinase 7
            (Mapk7), transcript variant X6, mRNA.
ACCESSION   XM_039085036
VERSION     XM_039085036.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039085036.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2820
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2820
                     /gene="Mapk7"
                     /gene_synonym="Bmk1; Erk5; Prkm7"
                     /note="mitogen-activated protein kinase 7; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 13 ESTs, 2 long SRA reads, 4 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 6 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:114509"
                     /db_xref="RGD:621505"
     CDS             500..2521
                     /gene="Mapk7"
                     /gene_synonym="Bmk1; Erk5; Prkm7"
                     /codon_start=1
                     /product="mitogen-activated protein kinase 7 isoform X2"
                     /protein_id="XP_038940964.1"
                     /db_xref="GeneID:114509"
                     /db_xref="RGD:621505"
                     /translation="MESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDL
                     KPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQ
                     AIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQ
                     SLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEP
                     DCAPPFDFAFDREALTRERIKEAIVAEIEDFHARREGIRQQIRFQPSLQPVASEPVCP
                     DVEMPSPWAPSGDCAMESPPPALPPCSGPAPDTVDLTLQPAPPASELAPPKREGAISD
                     NTKAALKAALLKSLRSRLRDGPSAPLEAPEPRKPVTAQERQREREEKRRRRQERAKER
                     EKRRQERERKERGAGTLGGPSTDPLAGLVLSDNDRSLLERWTRMARPPVPAPAPAPAP
                     TPKPTPTPTQSSAQPTSPPNGPVSQSTAPLQPAGSIPGPASQPVCPPPGPVPQPAGPV
                     PAPLQTAPSTSLLASQSLVPPSGLPGSGAPEVLPYFPSGPPPPDPGLTPQPSTSESPD
                     VNLVTQQLSKSQVEDPLPPVFSGTPKGSGAGYGVGFDLEEFLNQSFDMGVADGPQDSQ
                     ADSASLSASLLADWLEGHGMNPADIESLQREIQMDSPMLLSDLPDLQEP"
ORIGIN      
        1 tcaggaaccc tgtttctccc agtccgccta ctttttcctt aggggaagga tatctcttta
       61 agccagaata gagagatact ccttggtgcc cataagagat acgttctaga gccagagatt
      121 ggcacaatgg attggtggtg gaatggggag gatcagtgat ggaacgacta tgtgaggagg
      181 gagaatgaat tagtacaatc acaaccacca ctaactagct gtgcctcctc tgtatgtgag
      241 ctcttagtcg ctgcttcatg aggtagttgt gaaattaaaa tttgctcaat ggtacacaca
      301 aggccctgca cacagtcagc aggtggccat caagaagata cctaatgctt ttgatgtggt
      361 gaccaatgcc aaacggaccc tcagggaact gaagatcctc aaacacttca aacacgacaa
      421 tatcatcgcc atcaaggaca tcctgaggcc cactgtgccc tatggagaat tcagatctgt
      481 ctacgtggta ctggacctca tggaaagtga cctacaccag atcattcact cttcacagcc
      541 gctcacacta gaacatgtga gatacttcct ataccagctg cttcggggcc tcaaatacat
      601 gcactctgct caggtcatcc accgcgatct taaaccctct aaccttttgg tcaatgagaa
      661 ctgtgagctc aagattggtg actttggaat ggcccgtggc ctgtgtacat cccctgccga
      721 gcaccagtac ttcatgactg agtatgtggc cactcgctgg taccgtgctc ctgaactcat
      781 gctttcgctg catgagtaca cacaggctat tgacctctgg tctgtgggct gcatctttgg
      841 tgagatgctg gctcggcgac agctcttccc aggcaaaaac tatgtgcatc agttacagct
      901 gatcatgatg gtgttgggaa ctccatcacc agctgtgatt caggctgtgg gggctgaaag
      961 ggtgcgagcc tatatccaga gcctgccacc aaggcagcct gtaccttggg agacagtata
     1021 cccgggtgct gaccgccagg ccctctcact gctgggacgc atgttgcgat ttgaacccag
     1081 tgcccgaatc tcagctgctg ctgcccttcg ccaccccttc ctggctaagt accacgaccc
     1141 tgacgatgag cctgattgcg ccccaccttt tgactttgct tttgaccgtg aagcccttac
     1201 cagggagcgc attaaggagg ccattgtggc tgagattgag gacttccatg cacgacggga
     1261 gggcatccgc caacaaattc gcttccagcc ctctttgcag cctgtggcta gtgagcctgt
     1321 gtgtccagat gtcgagatgc ccagcccctg ggctccaagt ggagactgtg ccatggagtc
     1381 acctcctcca gcactaccac catgctctgg ccctgcccct gacactgttg atctgactct
     1441 gcagcctgcc ccgcccgcca gtgagcttgc tccgccaaaa agagagggtg ccatctccga
     1501 caataccaaa gcagccctca aagctgctct gctcaagtcc ctgaggagcc ggcttcgaga
     1561 tgggcccagt gcacccttgg aggcccctga acctcgaaag cctgtgacag ctcaggaacg
     1621 tcagcgagag cgagaagaga agcgcaggag gcgacaagag agagccaagg agagggagaa
     1681 gcgacgacaa gagcgggagc gcaaggagag gggggctggc accttggggg gcccctctac
     1741 tgaccctttg gctggattgg tgctcagtga caatgaccga agcctgctag agcggtggac
     1801 tcgcatggct aggcctcctg tccctgcacc agcaccagca ccagcaccaa caccaaaacc
     1861 aacaccaaca ccaacacagt cctctgctca acccactagt cctcccaatg gccctgtatc
     1921 tcagtctact gctcctctac agcctgcagg ctctattcct ggtcctgcct cccagcctgt
     1981 ttgcccaccc cctgggcctg ttccccagcc tgctggccct gtccctgccc ctctccagac
     2041 tgccccttcc actagccttt tggcctccca gtcacttgtg ccacctagtg ggttgcctgg
     2101 ttctggtgcc ccagaagttc tgccttactt cccatctggc ccaccacctc cagatcctgg
     2161 gctcacccct cagccttcta catcagagtc acctgatgtc aacctggtga cccagcaact
     2221 gtccaagtct caggtggagg accccctgcc tcccgtgttc tcaggcactc caaagggcag
     2281 tggggctggc tacggtgttg gctttgacct ggaggaattc ttaaaccaat cttttgacat
     2341 gggtgtggct gatgggccac aggatagcca ggcagactca gcctcactct cagcctccct
     2401 ccttgctgac tggcttgagg gccacggcat gaaccccgct gacattgagt ctctgcagcg
     2461 tgagatccag atggactccc caatgttgct gtctgacctg cctgacctcc aagaaccctg
     2521 agacccacag cttgtgcctt gctgccagga cagacccagc ttcaaggtcc aggggtgcag
     2581 tccagagggc tgcagccttg agcctggcag gtgaggctca gcttgagtta ctctgcaggt
     2641 tcatctcaga cccaccgttc agccttaagc agccgcctga gccaccaccg agccataaca
     2701 ggatgggagg ctctactcct tcctgcgcag tcttctccag tgttgtattt ttattactgt
     2761 tgtaatatgc atttgttttg ccatcgaaat gaggcctgtg aaatacaagg tttcctttaa
//
