LOCUS       XM_006246418            2982 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus mitogen-activated protein kinase 7
            (Mapk7), transcript variant X2, mRNA.
ACCESSION   XM_006246418
VERSION     XM_006246418.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006246418.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006246418.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2982
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2982
                     /gene="Mapk7"
                     /gene_synonym="Bmk1; Erk5; Prkm7"
                     /note="mitogen-activated protein kinase 7; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 14 ESTs, 3 long SRA reads, 9 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 137 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:114509"
                     /db_xref="RGD:621505"
     CDS             245..2683
                     /gene="Mapk7"
                     /gene_synonym="Bmk1; Erk5; Prkm7"
                     /codon_start=1
                     /product="mitogen-activated protein kinase 7 isoform X1"
                     /protein_id="XP_006246480.1"
                     /db_xref="GeneID:114509"
                     /db_xref="RGD:621505"
                     /translation="MAEPLKEEDGEDGSGEPPGRVKAEPVHSAASVVAKNLALLKARS
                     FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRE
                     LKILKHFKHDNIIAIKDILRPTVPYGEFRSVYVVLDLMESDLHQIIHSSQPLTLEHVR
                     YFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM
                     TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMM
                     VLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSA
                     RISAAAALRHPFLAKYHDPDDEPDCAPPFDFAFDREALTRERIKEAIVAEIEDFHARR
                     EGIRQQIRFQPSLQPVASEPVCPDVEMPSPWAPSGDCAMESPPPALPPCSGPAPDTVD
                     LTLQPAPPASELAPPKREGAISDNTKAALKAALLKSLRSRLRDGPSAPLEAPEPRKPV
                     TAQERQREREEKRRRRQERAKEREKRRQERERKERGAGTLGGPSTDPLAGLVLSDNDR
                     SLLERWTRMARPPVPAPAPAPAPTPKPTPTPTQSSAQPTSPPNGPVSQSTAPLQPAGS
                     IPGPASQPVCPPPGPVPQPAGPVPAPLQTAPSTSLLASQSLVPPSGLPGSGAPEVLPY
                     FPSGPPPPDPGLTPQPSTSESPDVNLVTQQLSKSQVEDPLPPVFSGTPKGSGAGYGVG
                     FDLEEFLNQSFDMGVADGPQDSQADSASLSASLLADWLEGHGMNPADIESLQREIQMD
                     SPMLLSDLPDLQEP"
ORIGIN      
        1 gaatccggag gacttgggtc tctctggtca ctactcgggg ataaggcgtc cagaacttcc
       61 ggcgccgaaa gagtgcgcag caaatcccct aggagatgaa gctaacaagg aaggaagaag
      121 agccaaaaga acctgcgagg gaggtggggt gcggagcctg ttgcctaggt cctgcttcgt
      181 agcccacaga gggggaactg agaagccctc gggacgatct tctcaccagc gcctcatata
      241 gaccatggcc gaaccgttga aggaggagga cggcgaagat ggctctgggg aaccccctgg
      301 gcgggtgaag gcagaacccg tccactccgc tgcatctgtc gtggccaaga acctggccct
      361 gctcaaagcc cgctccttcg acgtgacctt tgacgtgggg gacgagtacg agatcatcga
      421 gaccataggc aatggggcct acggggtggt gtcctcggcg cgccgccgcc tcacgggtca
      481 gcaggtggcc atcaagaaga tacctaatgc ttttgatgtg gtgaccaatg ccaaacggac
      541 cctcagggaa ctgaagatcc tcaaacactt caaacacgac aatatcatcg ccatcaagga
      601 catcctgagg cccactgtgc cctatggaga attcagatct gtctacgtgg tactggacct
      661 catggaaagt gacctacacc agatcattca ctcttcacag ccgctcacac tagaacatgt
      721 gagatacttc ctataccagc tgcttcgggg cctcaaatac atgcactctg ctcaggtcat
      781 ccaccgcgat cttaaaccct ctaacctttt ggtcaatgag aactgtgagc tcaagattgg
      841 tgactttgga atggcccgtg gcctgtgtac atcccctgcc gagcaccagt acttcatgac
      901 tgagtatgtg gccactcgct ggtaccgtgc tcctgaactc atgctttcgc tgcatgagta
      961 cacacaggct attgacctct ggtctgtggg ctgcatcttt ggtgagatgc tggctcggcg
     1021 acagctcttc ccaggcaaaa actatgtgca tcagttacag ctgatcatga tggtgttggg
     1081 aactccatca ccagctgtga ttcaggctgt gggggctgaa agggtgcgag cctatatcca
     1141 gagcctgcca ccaaggcagc ctgtaccttg ggagacagta tacccgggtg ctgaccgcca
     1201 ggccctctca ctgctgggac gcatgttgcg atttgaaccc agtgcccgaa tctcagctgc
     1261 tgctgccctt cgccacccct tcctggctaa gtaccacgac cctgacgatg agcctgattg
     1321 cgccccacct tttgactttg cttttgaccg tgaagccctt accagggagc gcattaagga
     1381 ggccattgtg gctgagattg aggacttcca tgcacgacgg gagggcatcc gccaacaaat
     1441 tcgcttccag ccctctttgc agcctgtggc tagtgagcct gtgtgtccag atgtcgagat
     1501 gcccagcccc tgggctccaa gtggagactg tgccatggag tcacctcctc cagcactacc
     1561 accatgctct ggccctgccc ctgacactgt tgatctgact ctgcagcctg ccccgcccgc
     1621 cagtgagctt gctccgccaa aaagagaggg tgccatctcc gacaatacca aagcagccct
     1681 caaagctgct ctgctcaagt ccctgaggag ccggcttcga gatgggccca gtgcaccctt
     1741 ggaggcccct gaacctcgaa agcctgtgac agctcaggaa cgtcagcgag agcgagaaga
     1801 gaagcgcagg aggcgacaag agagagccaa ggagagggag aagcgacgac aagagcggga
     1861 gcgcaaggag aggggggctg gcaccttggg gggcccctct actgaccctt tggctggatt
     1921 ggtgctcagt gacaatgacc gaagcctgct agagcggtgg actcgcatgg ctaggcctcc
     1981 tgtccctgca ccagcaccag caccagcacc aacaccaaaa ccaacaccaa caccaacaca
     2041 gtcctctgct caacccacta gtcctcccaa tggccctgta tctcagtcta ctgctcctct
     2101 acagcctgca ggctctattc ctggtcctgc ctcccagcct gtttgcccac cccctgggcc
     2161 tgttccccag cctgctggcc ctgtccctgc ccctctccag actgcccctt ccactagcct
     2221 tttggcctcc cagtcacttg tgccacctag tgggttgcct ggttctggtg ccccagaagt
     2281 tctgccttac ttcccatctg gcccaccacc tccagatcct gggctcaccc ctcagccttc
     2341 tacatcagag tcacctgatg tcaacctggt gacccagcaa ctgtccaagt ctcaggtgga
     2401 ggaccccctg cctcccgtgt tctcaggcac tccaaagggc agtggggctg gctacggtgt
     2461 tggctttgac ctggaggaat tcttaaacca atcttttgac atgggtgtgg ctgatgggcc
     2521 acaggatagc caggcagact cagcctcact ctcagcctcc ctccttgctg actggcttga
     2581 gggccacggc atgaaccccg ctgacattga gtctctgcag cgtgagatcc agatggactc
     2641 cccaatgttg ctgtctgacc tgcctgacct ccaagaaccc tgagacccac agcttgtgcc
     2701 ttgctgccag gacagaccca gcttcaaggt ccaggggtgc agtccagagg gctgcagcct
     2761 tgagcctggc aggtgaggct cagcttgagt tactctgcag gttcatctca gacccaccgt
     2821 tcagccttaa gcagccgcct gagccaccac cgagccataa caggatggga ggctctactc
     2881 cttcctgcgc agtcttctcc agtgttgtat ttttattact gttgtaatat gcatttgttt
     2941 tgccatcgaa atgaggcctg tgaaatacaa ggtttccttt aa
//
