LOCUS       NM_001109438            3284 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus MAP7 domain containing 1 (Map7d1), mRNA.
ACCESSION   NM_001109438 XM_001058588 XM_001058646 XM_001058709 XM_001058764
            XM_001058826
VERSION     NM_001109438.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3284)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473968.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001058764.1, XM_001058646.1, XM_001058826.1, XM_001058709.1,
            XM_001058588.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132262
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3284
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..3284
                     /gene="Map7d1"
                     /gene_synonym="Mtap7d1"
                     /note="MAP7 domain containing 1"
                     /db_xref="GeneID:681287"
                     /db_xref="RGD:1597986"
     exon            1..298
                     /gene="Map7d1"
                     /gene_synonym="Mtap7d1"
                     /inference="alignment:Splign:2.1.0"
     CDS             253..2706
                     /gene="Map7d1"
                     /gene_synonym="Mtap7d1"
                     /note="microtubule-associated protein 7 domain containing
                     1"
                     /codon_start=1
                     /product="MAP7 domain-containing protein 1"
                     /protein_id="NP_001102908.1"
                     /db_xref="GeneID:681287"
                     /db_xref="RGD:1597986"
                     /translation="MESGPRVEPGPGAPAAVLARIPQEPRPSPEGDPSPPPPPTPMSA
                     LVPDTPPDTPPAMKNASTPQQLPLEPVSPTGQVSPQPAPPPDECPSSEAKSRGPTPTA
                     TGPRDAKPSQRSSQPSPTAVPASDSPSAKQDVKKAGERHKLAKERREERAKYLAAKKA
                     VWLEKEEKAKALREKQLQERRRRLEEQRLKAEQRRAALEERQRQKLEKNKERYEAAIQ
                     RSVKKTWAEIRQQRWSWAGALHHNSPGRKTSGSRCSVSAVNLPKHVDSIINKRLSKSS
                     ATLWNSPSRNRSLQLSAWESSIVDRLMTPTLSFLARSRSAVTLPRNGRDQAVPVCPRS
                     ASASPLTPCSAPRSAHRCTPSGERPERRKPGAGGSPALVRRRLEATPVQKKEKKDKER
                     ENEKEKSALARERNLKKRQSLPASIRPRISTGAELSTKSKARPTSPSTTWHRPASPCP
                     SPGPGHTLPPKPPSPRGTTASPKGRIRRKEEAKESPSPSGPEDKNHSKSRTAEEKEPA
                     APASPAPSPVPSPTPAQPQKEQSSTQIPPDTAVPAVPTVPTFPTAPPTAAPSVTPSKP
                     MAGTTDREEATRLLAEKRRQAREQREREEQERKLQAERDKRMREEQLAREAEARAERE
                     AEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQRLEREKHFQKEEQER
                     QERRKRLEEIMKRTRKSEAAETKKQDGKETMANNSGPDPVKAVETRPSGLQKDSMQKE
                     ELAPQEPQWSLPSKEMPGSLVNGLQPLPAHQENGFPAKGTAGDKSLGRAAEGLLPFAE
                     ADAFLKKAVVQPPQVTEVL"
     exon            299..649
                     /gene="Map7d1"
                     /gene_synonym="Mtap7d1"
                     /inference="alignment:Splign:2.1.0"
     exon            650..718
                     /gene="Map7d1"
                     /gene_synonym="Mtap7d1"
                     /inference="alignment:Splign:2.1.0"
     exon            719..882
                     /gene="Map7d1"
                     /gene_synonym="Mtap7d1"
                     /inference="alignment:Splign:2.1.0"
     exon            883..997
                     /gene="Map7d1"
                     /gene_synonym="Mtap7d1"
                     /inference="alignment:Splign:2.1.0"
     exon            998..1108
                     /gene="Map7d1"
                     /gene_synonym="Mtap7d1"
                     /inference="alignment:Splign:2.1.0"
     exon            1109..1231
                     /gene="Map7d1"
                     /gene_synonym="Mtap7d1"
                     /inference="alignment:Splign:2.1.0"
     exon            1232..1395
                     /gene="Map7d1"
                     /gene_synonym="Mtap7d1"
                     /inference="alignment:Splign:2.1.0"
     exon            1396..1535
                     /gene="Map7d1"
                     /gene_synonym="Mtap7d1"
                     /inference="alignment:Splign:2.1.0"
     exon            1536..1864
                     /gene="Map7d1"
                     /gene_synonym="Mtap7d1"
                     /inference="alignment:Splign:2.1.0"
     exon            1865..2069
                     /gene="Map7d1"
                     /gene_synonym="Mtap7d1"
                     /inference="alignment:Splign:2.1.0"
     exon            2070..2208
                     /gene="Map7d1"
                     /gene_synonym="Mtap7d1"
                     /inference="alignment:Splign:2.1.0"
     exon            2209..2313
                     /gene="Map7d1"
                     /gene_synonym="Mtap7d1"
                     /inference="alignment:Splign:2.1.0"
     exon            2314..2367
                     /gene="Map7d1"
                     /gene_synonym="Mtap7d1"
                     /inference="alignment:Splign:2.1.0"
     exon            2368..2410
                     /gene="Map7d1"
                     /gene_synonym="Mtap7d1"
                     /inference="alignment:Splign:2.1.0"
     exon            2411..2501
                     /gene="Map7d1"
                     /gene_synonym="Mtap7d1"
                     /inference="alignment:Splign:2.1.0"
     exon            2502..2695
                     /gene="Map7d1"
                     /gene_synonym="Mtap7d1"
                     /inference="alignment:Splign:2.1.0"
     exon            2696..3284
                     /gene="Map7d1"
                     /gene_synonym="Mtap7d1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggactcggc cggcgcgggg caaagcagca gaatcgcggt cgcggaggac cggccccggg
       61 tagccggcta ctctgagctt tactagctac cggcctcgac ctctcccact ccgagcgcgg
      121 ccgcctctga gtcgttgccc gcagggcggg ccgggcggga tgcgccgcgg gaccccggtc
      181 ctggcctccg gccgtcgccg ccgccgcggc tgagaccccc cctcccccaa aacctcctgt
      241 gacgccgcag ccatggagag tggcccgcgt gtggagcccg gcccgggcgc acccgcagct
      301 gtgttagcca ggatccccca agagccaaga ccctctccag aaggtgaccc ttcccctcca
      361 ccgccaccaa caccgatgtc agccttggtt cctgacactc ccccggacac ccctcctgcc
      421 atgaagaatg cctctacccc tcagcagctc cccctggaac cagtgagtcc cactgggcag
      481 gtctcacctc agccagctcc cccaccggat gaatgcccat cctcagaagc aaagagcagg
      541 ggacccaccc ccacagccac aggaccacgg gatgccaagc cttctcaaag gagcagccaa
      601 ccatccccaa cagcagtgcc agcctctgac agcccttctg ccaagcaaga cgtaaagaag
      661 gcaggagaga gacacaagct tgccaaagag cgccgagaag agcgggccaa gtacctggcc
      721 gccaagaaag cagtgtggct ggagaaggag gagaaggcca aggcgctccg ggaaaagcaa
      781 ctccaggagc gtcgccgtcg gctggaggag cagaggctta aagcggaaca gcgccgggct
      841 gccctggagg agcggcagag acagaagctt gagaaaaaca aggagcgcta tgaagcagca
      901 atccagcggt cagtgaagaa gacatgggct gagatccggc aacagcgctg gtcctgggca
      961 ggggccctgc accacaactc ccctggacgt aagaccagtg ggagcaggtg ctccgtgtcg
     1021 gcagtaaacc tgcccaaaca cgtggactct ataatcaaca agcggctctc aaagtcctct
     1081 gccacgctct ggaactcccc cagtagaaat cgcagcctgc agctgagcgc atgggagagc
     1141 agcattgtgg atcgtctgat gacgcccacc ctctccttcc tggctcggag tcgcagcgcg
     1201 gtcacactgc cccgcaacgg cagggaccag gccgtgccag tgtgcccgcg ctcggcctcc
     1261 gccagccccc tgacgccttg tagcgcccct cggagcgcgc accgctgcac cccgtccggg
     1321 gagcgcccag aacggcgcaa gcccggcgcc ggtggcagcc ccgcactggt gcgtcgccgg
     1381 ctggaagcca cgccggtgca gaaaaaggag aagaaggaca aggagcggga aaacgagaag
     1441 gaaaagagcg ccctggcccg tgaacggaac ctcaagaagc gccagtcgct gccagcatcc
     1501 atcagacccc ggatctccac aggcgctgag ctcagcacta agtccaaggc ccggccaacc
     1561 tctccctcta caacctggca cagacctgcc tccccctgcc ccagcccagg accaggccat
     1621 acccttcctc caaaaccacc atctccccga ggcaccactg catcacccaa ggggcggatt
     1681 cggaggaagg aggaggcaaa agagagcccc agcccatcgg gaccggagga taagaaccac
     1741 agcaagagca gaaccgctga ggagaaggag ccagctgccc cagcttcacc ggcgccctcc
     1801 ccagtgccct cacccacccc agcccagcct cagaaggagc agtcctccac acagatccct
     1861 ccagacaccg ctgtcccggc tgtccccact gtccctactt tcccgactgc ccctcctacc
     1921 gctgctccct cggtgacccc tagcaaaccc atggccggca ccacagaccg agaagaagcc
     1981 actcggctcc tggcagagaa gcggcgccag gctcgggaac agagggaacg ggaagaacag
     2041 gagcggaagc tacaggctga aagggacaaa cgaatgcggg aggagcagct ggcccgggag
     2101 gctgaagccc gggctgaacg tgaggctgag gcccggagaa gggaggagca agaggctcga
     2161 gagaaggcgc aggctgagca ggaggagcag gagcggctgc agaagcagaa agaggaagcc
     2221 gaagctcggt cccgggaaga agctgagcgc cagcgcctgg agcgggaaaa gcactttcag
     2281 aaggaggaac aggagagaca agagcgaaga aagcggctgg aggagataat gaagaggact
     2341 cggaagtcag aagccgcaga aaccaagaag caggatggaa aggagaccat ggctaacaat
     2401 tctggcccag accctgtgaa agctgtagaa actcggccct ctgggctaca gaaggattct
     2461 atgcagaaag aggagctggc cccccaggag ccacagtgga gcctgccaag caaggagatg
     2521 ccagggtccc tggtaaatgg cctgcagcct ctcccagcgc accaggagaa cggcttcccc
     2581 gcaaagggaa ctgccgggga caagagtctg ggtcgagcag cagagggact cctcccattc
     2641 gcagaggcag acgcttttct caagaaagcg gtggtgcagc ctccacaagt cacagaagtt
     2701 ctttaagcat tgccttggac ccgggtgcag ctgtgaaggt tcctcatgtc ggttcgtggg
     2761 tgtctagaag agaaagagac agaacaaaga tggacgcagc ctgggctccc ggaggcagag
     2821 ctcctctttg ttttcaatct gcaccttaca gactgatgat gtctttggct gaaagcaggt
     2881 cctgtccctc agcacgttca tgtgctcaca cgctcggaca cccaccttcc ccgtacacac
     2941 atacactcat agcctctctg gcctcccccc acggggaagg accacttgta gtatttgcct
     3001 tggtttggtg gggtacagtg gatgtgaata ctgtaaatag cttgtgctca gacacctctg
     3061 cgtggacgag gcgggtacag gactcggacc ctcctcccaa gactccctgg gaagatctcc
     3121 ctctatttaa ctaaccgacg gggaactcag gtctgggaac ggaggggcac cttgggccac
     3181 agaatactgg ttgcttcagg ggcaataccc tctgtcctgg cctggaatca gtgttattac
     3241 atctgatcaa acgtctccag aaataaagtg agaataattc tgcc
//
