LOCUS       XM_039082642            1221 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus microtubule-associated protein 4
            (Map4), transcript variant X28, mRNA.
ACCESSION   XM_039082642
VERSION     XM_039082642.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1221
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1221
                     /gene="Map4"
                     /gene_synonym="Mtap4"
                     /note="microtubule-associated protein 4; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 54 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:367171"
                     /db_xref="RGD:1564359"
     CDS             507..884
                     /gene="Map4"
                     /gene_synonym="Mtap4"
                     /codon_start=1
                     /product="microtubule-associated protein 4 isoform X28"
                     /protein_id="XP_038938570.1"
                     /db_xref="GeneID:367171"
                     /db_xref="RGD:1564359"
                     /translation="MADLSLVDALTEPPPEIEGEIKRDFMAALEAEPYDDIVGETVEK
                     TEFIPLLDGDEKSGNSESKRKPCVDTSQVEDIPSSKPTLLANGDHGVEGNNTTVRQLL
                     ATTSQQKEDGHDNLRMWEVEAGR"
ORIGIN      
        1 cagggccggc ggggcccact caggcccacc cgcacgcagg ccgcgtgcgc ctgacactac
       61 catcctctct gctggaaaag gaagcggcgg ccatctcaga acggcggagg cggcctgagg
      121 ctcgccattc gctgagacat ccgcgggcgg gaggccgtgg tctagacccc cgacgcgcgc
      181 ctcgccaacg gtccaccgct cgtgccgctt tcacggagag gtcgaggagc aggggtcggc
      241 gtggattggt tcgtgacgcc tcggcccgcc cttccctggc gcccattggc tgaggcggca
      301 cccgctgacg gcgaggacgc tccgccttcg tgcgggcctt caagagggcg acgaggaagc
      361 ggccacctcc ctgtgccccg cccctccggc tagctctgtg gcttctgcgg ctcctcccgg
      421 ctgctccggg ctcctctctg ccctctcccg gctttctgcg gctccagctt gggctcggcg
      481 gcggcgggca gtcgcagtgg taaagaatgg cggacctcag ccttgtggat gcattgacag
      541 agccacctcc agaaattgaa ggagagataa agcgagactt tatggctgcg ctggaggcag
      601 agccctatga tgacattgtg ggagaaactg tggagaagac tgagtttatt cctctcctgg
      661 atggtgatga gaaatctggg aactcagagt ccaaaaggaa accatgtgta gacactagcc
      721 aggttgaaga tatcccatct tctaaaccaa cacttctagc caatggtgat catggagtgg
      781 aggggaataa cactacagtt aggcagttgc tagccactac aagccaacag aaagaagatg
      841 ggcatgataa tctcaggatg tgggaggtgg aggcaggaag atgatattca agaagatcct
      901 cagggccttt gagatggctc agcaggaaaa gattttactg ccaagcctga agcctgatgc
      961 cctgagttca ttccccagac tggaggtggt gaagggggat aactgtttcc tgtaagttgt
     1021 tctcccctcc ccccagataa attcagaatg gtcaagagat gacttcttta ttgtattcta
     1081 ttctatttta tttcattttc agacaagctg gccttaagag ttcgtatgta atatatgttg
     1141 acctgaattt ggtcttagag ctaccttaaa agtcccgtgt gtcattagac ctggcttaca
     1201 ttacatttaa ggaaaaacga t
//
