LOCUS       NM_001106070            3189 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus microtubule-associated protein 1S (Map1s), mRNA.
ACCESSION   NM_001106070 XM_001066027 XM_214321
VERSION     NM_001106070.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3189)
  AUTHORS   Eriksson,M., Samuelsson,H., Samuelsson,E.B., Liu,L., McKeehan,W.L.,
            Benedikz,E. and Sundstrom,E.
  TITLE     The NMDAR subunit NR3A interacts with microtubule-associated
            protein 1S in the brain
  JOURNAL   Biochem Biophys Res Commun 361 (1), 127-132 (2007)
   PUBMED   17658481
REFERENCE   2  (bases 1 to 3189)
  AUTHORS   Ding,J., Valle,A., Allen,E., Wang,W., Nardine,T., Zhang,Y., Peng,L.
            and Yang,Y.
  TITLE     Microtubule-associated protein 8 contains two microtubule binding
            sites
  JOURNAL   Biochem Biophys Res Commun 339 (1), 172-179 (2006)
   PUBMED   16297881
REFERENCE   3  (bases 1 to 3189)
  AUTHORS   Liu,L., Vo,A., Liu,G. and McKeehan,W.L.
  TITLE     Putative tumor suppressor RASSF1 interactive protein and cell death
            inducer C19ORF5 is a DNA binding protein
  JOURNAL   Biochem Biophys Res Commun 332 (3), 670-676 (2005)
   PUBMED   15907802
REFERENCE   4  (bases 1 to 3189)
  AUTHORS   Orban-Nemeth,Z., Simader,H., Badurek,S., Trancikova,A. and
            Propst,F.
  TITLE     Microtubule-associated protein 1S, a short and ubiquitously
            expressed member of the microtubule-associated protein 1 family
  JOURNAL   J Biol Chem 280 (3), 2257-2265 (2005)
   PUBMED   15528209
REFERENCE   5  (bases 1 to 3189)
  AUTHORS   Liu,L., Amy,V., Liu,G. and McKeehan,W.L.
  TITLE     Novel complex integrating mitochondria and the microtubular
            cytoskeleton with chromosome remodeling and tumor suppressor RASSF1
            deduced by in silico homology analysis, interaction cloning in
            yeast, and colocalization in cultured cells
  JOURNAL   In Vitro Cell Dev Biol Anim 38 (10), 582-594 (2002)
   PUBMED   12762840
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474031.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_214321.3, XM_001066027.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC169058.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132302, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3189
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16p14"
     gene            1..3189
                     /gene="Map1s"
                     /gene_synonym="Bpy2ip1; Mtap1s"
                     /note="microtubule-associated protein 1S"
                     /db_xref="GeneID:290640"
                     /db_xref="RGD:1308266"
     exon            1..158
                     /gene="Map1s"
                     /gene_synonym="Bpy2ip1; Mtap1s"
                     /inference="alignment:Splign:2.1.0"
     CDS             35..2953
                     /gene="Map1s"
                     /gene_synonym="Bpy2ip1; Mtap1s"
                     /note="MAP-1S; BPY2 interacting protein 1"
                     /codon_start=1
                     /product="microtubule-associated protein 1S"
                     /protein_id="NP_001099540.1"
                     /db_xref="GeneID:290640"
                     /db_xref="RGD:1308266"
                     /translation="MAAVMAAPEPAEAPSSLLLLVVGGECGCPGLLAYVLEELERGVR
                     SWEDVDPDVCSLDEQLKAFVSRHSATFSSIVKGQRSLHHRGETLETLVLLNPSDKSLC
                     DELRNLLMDPAPHKLLVLAGPCLEETGELLLQTGGFSAHHFLQVLGDKEVQDALASAP
                     AAPALTVSCPTFGDWALLGPAPGLRLRLNPPARLPSSEGLRAFLEYVAESLEPPSPFE
                     LLEPPATGGFLRLARPCCYVFPGGLGDAAFFAVNGFTVLVNGGSNPKSSFWKLVRHLD
                     RVDAVLVTHAGADSLPGLNSLLRRKLAEREAAAGPQGQHEERLRRLLSPALGVVFLNA
                     REAGSRLRGGEDEAVCARSLLRSLGIVPLPLQRGPQPSCPTVLFEKLGVGRLELFVLH
                     PPPGDPAAPACALLVWQPAAPGDKVVRVLFPGRTPPARLLDGLQRLQHLPCLRRPVVT
                     TQDLEVPSRANSQDSLASRDSTRKEPVRGTVGATSRSAVRREPALATRDQKKDTKPGP
                     TRSTVRDVRRSGPGVVTTKPRVSQNGPRAPVPAAPPAAPAPEFPGEAENIVESERPPA
                     PSPTLSPAQSPPPTAPGNSPERLSLSPLRPEPAPDASPSATTPTLTTPSLPAELGSPH
                     STEVDESLSVSFEQVLPAGDAGLSLPLRLARRSTSPHDVDLCLVSPCEFSHRKPPPPA
                     SPGSSDSSARSQERPPETPPTSVSESLPTLSDSDPVPVADSDDDAGSESAARDPLPTP
                     RVPPPLPDAPGICMVDPEALPPRARQPLSTANSSRGRKAPARPSSASAAPRAATVAAK
                     TKGPVGDRSRPLSARSEPADKPGRVPLTRKPSVPKTVPKMASATRNSSGPSSRPAPLA
                     AGSPVYLDLAYLPGGGAGHLDQNFFLRVRALCYVISGQGQRQEEGLRGVLDALLAGKR
                     QWDLDLQVTLIPTFDSAVMHRWYEETHEQHQALGIRVLGSGSLVSMQDEAFPACKVEF
                     "
     exon            159..263
                     /gene="Map1s"
                     /gene_synonym="Bpy2ip1; Mtap1s"
                     /inference="alignment:Splign:2.1.0"
     exon            264..346
                     /gene="Map1s"
                     /gene_synonym="Bpy2ip1; Mtap1s"
                     /inference="alignment:Splign:2.1.0"
     exon            347..487
                     /gene="Map1s"
                     /gene_synonym="Bpy2ip1; Mtap1s"
                     /inference="alignment:Splign:2.1.0"
     exon            488..2573
                     /gene="Map1s"
                     /gene_synonym="Bpy2ip1; Mtap1s"
                     /inference="alignment:Splign:2.1.0"
     exon            2574..2797
                     /gene="Map1s"
                     /gene_synonym="Bpy2ip1; Mtap1s"
                     /inference="alignment:Splign:2.1.0"
     exon            2798..3189
                     /gene="Map1s"
                     /gene_synonym="Bpy2ip1; Mtap1s"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggcccggcgt tcagagcgtc cgggcggtgc gaagatggcg gcggtgatgg cggcgccgga
       61 gcctgcggag gcgcccagct ccctgctgtt gctggtggtg ggcggcgagt gcggttgccc
      121 cgggctgctg gcctacgtcc tggaggagtt ggaacgaggt gttcgctcgt gggaggatgt
      181 agaccccgat gtttgcagcc tggatgagca gctcaaggcc tttgtgtccc ggcattccgc
      241 caccttctcc agcatagtga aagggcagcg gagcctgcac caccgtggag agaccctgga
      301 gacactggtc ctgctgaatc cctcagacaa gtccctgtgt gatgagctcc ggaacctcct
      361 gatggacccc gcccctcaca aactgctggt cctggcaggg ccctgcctgg aggagactgg
      421 ggagctactg ctgcagactg gggggttctc ggcccaccac ttcctgcagg tgctggggga
      481 caaagaggtt caggatgcac tggcctcggc accagcagcc ccggccctca cagtgtcctg
      541 tccaaccttt ggggactggg cgctgctggg acctgcacct gggctgcggt tgcgactaaa
      601 cccgcctgca cggctgccat cctcagaggg cctccgtgcc ttcctggagt atgtggctga
      661 gtcgctggag ccaccatcgc ccttcgagtt gttggaaccc ccggctacag gtggctttct
      721 gcgcctggca cgaccctgtt gctatgtgtt cccgggtggc ctgggagacg ctgccttctt
      781 cgctgtcaac ggctttacag tgctggtgaa cggcggctcc aaccccaagt cgagcttctg
      841 gaagctggtg cgccacctgg atcgcgtgga cgccgtgctt gtgacccacg cgggtgctga
      901 cagcctgcct ggcctcaaca gcctgctgcg ccgcaaactg gcagagcgag aggcagccgc
      961 aggaccgcag ggacagcatg aggagcggct gcgtaggctg ctgtcacctg cactgggcgt
     1021 ggtgttcctg aatgctcgtg aggctgggtc gcggttacgt gggggcgagg acgaggcagt
     1081 gtgtgcgcgg agcctgctac gcagcctggg catcgtccct ctgccgctgc agcgcggccc
     1141 acagccctcg tgccccacag tccttttcga gaagctaggc gtaggccgcc ttgagctctt
     1201 tgtgctgcat cctcctcctg gggaccctgc agcacctgcc tgtgctctgc tcgtgtggca
     1261 gccagcagcg cctggtgaca aggtggtccg agtgctgttt cctggccgca caccaccagc
     1321 gcgcctgctg gatgggctac agcgcctgca gcacctgccg tgcctacgta ggccagtagt
     1381 caccacgcaa gacctggaag tgccctcaag ggccaacagc caagacagtc tggcctcgag
     1441 ggacagtaca cgcaaggagc cagtccgtgg cactgttggt gccaccagca ggagtgcagt
     1501 gcgaagggaa cctgccctgg ccactcgtga ccagaagaag gacacaaaac ctgggcccac
     1561 tcggtctaca gtccgagacg tgcgccgctc cgggcctggt gttgtcacca caaagcctcg
     1621 agtgtcacag aatgggcctc gtgccccagt tccagcagcg ccacctgcag cccctgcgcc
     1681 cgagttccct ggagaagcag agaacatcgt ggagtcggag cggccacctg ccccatcccc
     1741 gaccttgtcc ccagctcagt ccccaccacc tacagcaccc ggcaatagcc ctgagcgcct
     1801 atcactcagc ccgctgcgcc cagaacctgc cccagacgca tccccgtcag ccacaacgcc
     1861 cacgctgacc acaccctctc ttcccgcgga gctgggctca ccccactcaa ctgaggtgga
     1921 cgagtcgctc tccgtgtcct tcgagcaagt actgccagca ggtgatgcag ggcttagcct
     1981 gcccctgcgc ctcgcacgcc gctccacatc tcctcatgat gtagacctgt gccttgtgtc
     2041 accctgtgag ttttcacacc gcaagccacc ccctcctgca tccccaggca gctcagacag
     2101 cagtgctcgg tcacaggagc ggccacccga gactccaccc acgtctgtga gcgagtcact
     2161 gcccacattg tctgactctg atcccgtgcc tgtggcggat tctgatgacg atgcaggcag
     2221 tgagagcgcg gccagggacc cgctgcctac acctcgtgtg ccaccaccac tgccggacgc
     2281 accaggaatc tgcatggtgg accctgaggc gctaccacct cgtgcacggc agcctctcag
     2341 cacagccaat tccagccgtg gccgcaaggc ccctgcaagg ccaagctctg cgtctgcagc
     2401 ccccagagct gcaactgtag ctgccaagac aaagggtcca gtgggggacc ggagccggcc
     2461 actcagtgcc cgcagcgagc ctgcagacaa accaggccga gtgcccctca ccaggaagcc
     2521 ctcggtccct aagacagtcc ccaagatggc ctctgccaca aggaactcct ctggacccag
     2581 tagccgccct gcaccgcttg ctgctggctc ccctgtgtac ctggacctgg cctacctgcc
     2641 tggtggcggt gctggccacc tggaccagaa cttcttcctg cgtgtgcgtg cactctgcta
     2701 tgtcatcagt gggcaaggcc agcgccagga agagggcctg cgtggcgtgc tggatgcatt
     2761 gctggctggc aagaggcagt gggaccttga cctgcaggtc acactgatcc ccaccttcga
     2821 ctctgcagtg atgcacaggt ggtatgagga gacgcatgag cagcaccagg cactgggcat
     2881 cagggtgctg ggcagcggca gcctggtgtc catgcaggac gaggccttcc ctgcctgcaa
     2941 ggtggagttc tagccccaca ctgcagggcg gcccgggagc aacagttctg tgtgtgacgc
     3001 acccagggcg agagccacac cgctttatct cttgtccgcg ccccatcaca tgccaagcac
     3061 ggctctccat gccttctgtc ctagaactca ggttggagag gcagaaggat ctatgcggag
     3121 tccaggctag cctgggctac atagtgaatc cttgtttcaa aaccacaaaa aataaaccag
     3181 atggctgag
//
