LOCUS       NM_001109603            2382 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus MANSC domain containing 1 (Mansc1), mRNA.
ACCESSION   NM_001109603 XM_001074954 XM_006237537
VERSION     NM_001109603.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2382)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On or before Nov 3, 2022 this sequence version replaced
            XM_006237537.4, NM_001109603.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.18213.1,
                                           SRR26643290.18195.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-183               JAXUCZ010000004.1  169189682-169189864 c
            184-529             JAXUCZ010000004.1  169182956-169183301 c
            530-670             JAXUCZ010000004.1  169177557-169177697 c
            671-2382            JAXUCZ010000004.1  169170164-169171875 c
FEATURES             Location/Qualifiers
     source          1..2382
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q43"
     gene            1..2382
                     /gene="Mansc1"
                     /note="MANSC domain containing 1"
                     /db_xref="GeneID:690606"
                     /db_xref="RGD:1593458"
     exon            1..183
                     /gene="Mansc1"
                     /inference="alignment:Splign:2.1.0"
     exon            184..529
                     /gene="Mansc1"
                     /inference="alignment:Splign:2.1.0"
     CDS             310..1569
                     /gene="Mansc1"
                     /EC_number="3.2.1.14"
                     /note="MANSC domain-containing protein 1"
                     /codon_start=1
                     /product="MANSC domain-containing protein 1 precursor"
                     /protein_id="NP_001103073.1"
                     /db_xref="GeneID:690606"
                     /db_xref="RGD:1593458"
                     /translation="MLFGGHSLAYTLVIISFLTPRLSAGQNCFTKSLEDVVIDIQSSL
                     SKGIRGNEPIHMAAQEDCIGACCSTHDIAGDKSCNLMIFDTRKTDRQPNCYLFFCPSE
                     DACPLKPAKGLVSYRLFRDVPLTRANSSLQKLTQEESLLLGHALPGVTPGVPPPAGYP
                     KPTGLFWRDLSSPKSTTSLHLQKYIQVDDASTQPPSYEGKNHSQSLQLPSELNMVHLL
                     PKTPPFPTVAPRGSNVSATLKPALLLASISVTPKTSRPKDATTVPHVTTVTSESPAVP
                     VSTGFIPVVSPQAALTTILQAHTDSKGIFKTVPFRGGSKLTSDTRHGKRPAATSLSTS
                     ESSVINKTAPWENGRISVGSIPRNRGPNTRHGLSFEKWLLIGTLLFGVLFLVIGLVLL
                     GRMLVESLRRKRYSRLDYLINGIYVDI"
     exon            530..670
                     /gene="Mansc1"
                     /inference="alignment:Splign:2.1.0"
     exon            671..2382
                     /gene="Mansc1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtcgctgcg acggaagcag gaacttggtc acgacaaaat ctgcggggcc ggtgcgggag
       61 ctgcggagca tcccctgcga tccttcccag agtcttgtgc ctcttcgccc gttctttgca
      121 aaggcgacct atccgtcctt gggcccgggc gccacgggga ccacaggggt ctcttgtttg
      181 cagttttttc tagagtaaag acaatctgta cagtcttctg aggtgagacg agaccagaag
      241 gtccatcctt gaccagaagg gtccatcctt ggtctttgaa gagagaccaa gacgaagcga
      301 cagttcagaa tgctcttcgg gggacacagt ttggcttaca cattggtaat catttccttc
      361 ctgacaccaa ggctgtccgc tggtcagaac tgcttcacca agagcctgga ggatgttgtc
      421 atcgacattc agtcttcgct ttccaaaggc atcagaggca atgagcccat acacatggca
      481 gctcaggaag actgcatcgg tgcctgctgt tcaacacacg acatagccgg ggacaagtca
      541 tgtaatttga tgatcttcga cacccggaag acagacagac agcccaactg ttacctgttt
      601 ttctgtccca gtgaggacgc ctgtccactg aagccagcca agggccttgt gagctacagg
      661 ctcttcagag atgttccact gaccagagct aattcatcac tccaaaagtt aacacaagag
      721 gagtctctct tacttggcca cgccttacca ggagtcaccc ctggggtccc tcccccagca
      781 ggctacccaa agcccaccgg cctgttttgg agagacttat cttctccgaa gtccacaacc
      841 tccctgcact tgcagaaata catccaggtt gatgacgcaa gcacgcagcc cccttcctat
      901 gaagggaaaa accattctca gagcttacag cttccctcag aactaaacat ggttcacctg
      961 ctccctaaaa cgcctccatt tcccactgtg gctccccgcg gtagtaacgt ctctgccacc
     1021 ctgaaacctg cacttctgct ggccagcatt tcagtgacac ctaagacttc acggccgaag
     1081 gacgccacca cagttccaca cgtaaccact gtgacctcgg agtctccagc agtccccgtg
     1141 tctacaggtt ttatacccgt ggtttcaccc caggcagctt tgacgaccat ccttcaagca
     1201 catacagact cgaaaggcat cttcaaaaca gtgccctttc gaggaggctc caagctaact
     1261 tcagacacga ggcatgggaa gcgccctgct gccacttctt tgtcaacctc agagtcttcc
     1321 gttataaaca agactgcccc ctgggagaac gggaggatca gtgtaggcag cataccacgg
     1381 aacaggggtc caaacacccg gcatggcctt tcatttgaga aatggcttct cattgggacc
     1441 ctcctcttcg gtgttttgtt tctggtaata ggcctcgtcc tcttgggtag gatgctggtt
     1501 gaatccctcc gtaggaaacg ctattcaaga cttgactact tgatcaatgg gatctatgtt
     1561 gacatctaaa gacaaattcg gtatctctca cttcatgtaa gatctcgttg ccaaatgcca
     1621 cctgcgttcc ttctgcccag cccatctcag caggaattat attttgaaaa atagccctat
     1681 ttccctctcc ctcctcctcc tcctcctcct cctcctcctc ctcttcctcc ccctcctcct
     1741 cctcctcctc ctcctccccc tccccctcct cctcctcctc ttcctcctct cctcctcccc
     1801 cctcctcctt cccttccttt ttgaaacagg ctggggtagc ccaggacggt tttgaactct
     1861 tgatcttcct acctctgtct cctaaattca ggggttgcag attttcacta ccatgtctgg
     1921 atttttaatt aaagaaaaaa ttttttaaaa ttctttgtgc aaggtcaggg ccttctgcat
     1981 gctcaacaag ctgtctcctc ctaagccaca ccctcagccc caccactttc tttgtttgac
     2041 ttttgttttt gttgtttttg ttttgttttg tttttaagag gaagcgagaa ggaataaaag
     2101 aaactaagtt actgagggtg tatcgatctg tctgtaaaat agtagctgaa aataattccc
     2161 aactaaaata ttaagtataa actagaagtg tgtctccggc tgtaggtaaa gaccgctcag
     2221 gtttaggacg tctgagttga ttcattactg tttccctttc cagataatga caaccgtttg
     2281 atactagtct taatggactg aagtattttc ttttcttttt tttatgaatt ccaataaaac
     2341 tcattccaga tgtatctccc tccaattaaa tatttgaata aa
//
