LOCUS       NM_001106593             747 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus mitochondrial assembly of ribosomal large subunit
            1 (Malsu1), mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_001106593 XM_001055149 XM_216139
VERSION     NM_001106593.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 747)
  AUTHORS   Brown A, Rathore S, Kimanius D, Aibara S, Bai XC, Rorbach J, Amunts
            A and Ramakrishnan V.
  TITLE     Structures of the human mitochondrial ribosome in native states of
            assembly
  JOURNAL   Nat Struct Mol Biol 24 (10), 866-869 (2017)
   PUBMED   28892042
REFERENCE   2  (bases 1 to 747)
  AUTHORS   Rorbach J, Gammage PA and Minczuk M.
  TITLE     C7orf30 is necessary for biogenesis of the large subunit of the
            mitochondrial ribosome
  JOURNAL   Nucleic Acids Res 40 (9), 4097-4109 (2012)
   PUBMED   22238376
  REMARK    Erratum:[Nucleic Acids Res. 2016 Jan 29;44(2):992. PMID: 26487634]
REFERENCE   3  (bases 1 to 747)
  AUTHORS   Hauser R, Pech M, Kijek J, Yamamoto H, Titz B, Naeve F,
            Tovchigrechko A, Yamamoto K, Szaflarski W, Takeuchi N, Stellberger
            T, Diefenbacher ME, Nierhaus KH and Uetz P.
  TITLE     RsfA (YbeB) proteins are conserved ribosomal silencing factors
  JOURNAL   PLoS Genet 8 (7), e1002815 (2012)
   PUBMED   22829778
REFERENCE   4  (bases 1 to 747)
  AUTHORS   Chevallet M, Lescuyer P, Diemer H, van Dorsselaer A, Leize-Wagner E
            and Rabilloud T.
  TITLE     Alterations of the mitochondrial proteome caused by the absence of
            mitochondrial DNA: A proteomic view
  JOURNAL   Electrophoresis 27 (8), 1574-1583 (2006)
   PUBMED   16548050
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474011.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_216139.4, XM_001055149.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BP503782.1, CB576670.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q24"
     gene            1..747
                     /gene="Malsu1"
                     /gene_synonym="RGD1306936"
                     /note="mitochondrial assembly of ribosomal large subunit
                     1"
                     /db_xref="GeneID:297082"
                     /db_xref="RGD:1306936"
     exon            1..270
                     /gene="Malsu1"
                     /gene_synonym="RGD1306936"
                     /inference="alignment:Splign:2.1.0"
     CDS             30..719
                     /gene="Malsu1"
                     /gene_synonym="RGD1306936"
                     /codon_start=1
                     /product="mitochondrial assembly of ribosomal large
                     subunit protein 1"
                     /protein_id="NP_001100063.1"
                     /db_xref="GeneID:297082"
                     /db_xref="RGD:1306936"
                     /translation="MGPGWSPARRVWPLLWRRVFSQRASPKVSSVPWLPRLAERWLLA
                     GPATCLTPTPSPRGLHHGPQPEERTEGDARLQPGAADHIGAKFDIDMLVSLLKQENAR
                     DICVIKVPPEMRYTDYFVIGSGTSTRHLHAMVHYIVKTYKHLKCRSDPYVKIEGKDTD
                     DWLCVDFGSMVIHLMLPETRETYELEKLWTLRSFDDQLAQIAAETLPEDFILGLEDDT
                     SSLTPMEFKCK"
     exon            271..449
                     /gene="Malsu1"
                     /gene_synonym="RGD1306936"
                     /inference="alignment:Splign:2.1.0"
     exon            450..531
                     /gene="Malsu1"
                     /gene_synonym="RGD1306936"
                     /inference="alignment:Splign:2.1.0"
     exon            532..747
                     /gene="Malsu1"
                     /gene_synonym="RGD1306936"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgcccccaag agaagtcacg gcgacagcta tgggtccggg ctggtcgcct gcgcggcgtg
       61 tgtggccgct gctgtggcgc agggtgttct cccagagagc gagccccaag gtgtcttcgg
      121 ttccctggct tccgcgactg gcagagagat ggcttctcgc ggggcccgcg acctgcctga
      181 ccccgacccc gagcccgcgc ggcctgcacc atgggcctca gcctgaggag cgaaccgaag
      241 gcgatgctcg cctgcagccg ggagccgcag atcacattgg tgccaagttt gacatcgata
      301 tgctggtttc acttctgaag caagaaaatg caagagacat ttgtgtgatc aaggttcctc
      361 cagaaatgag atacacagac tactttgtaa ttggtagtgg gacttccacc cgacacttac
      421 atgctatggt ccactacatt gtgaagacgt ataaacacct gaagtgcaga agcgatccat
      481 atgtcaagat cgaggggaag gacactgacg actggctgtg tgtggacttc ggcagtatgg
      541 tgatccattt gatgcttccg gaaaccagag aaacctacga attagagaaa ttatggactc
      601 tacgttcttt tgatgaccag ttagctcaga tagcagctga gacgttacct gaagacttca
      661 ttcttggact agaagatgac acttcatccc tgactccaat ggagttcaaa tgtaaataaa
      721 acaaagctaa tgccgtccat ccctctg
//
