LOCUS       NM_001014002            1741 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus MAK16 homolog (Mak16), mRNA.
ACCESSION   NM_001014002 XM_224930
VERSION     NM_001014002.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1741)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   2  (bases 1 to 1741)
  AUTHORS   Lau,N.C., Seto,A.G., Kim,J., Kuramochi-Miyagawa,S., Nakano,T.,
            Bartel,D.P. and Kingston,R.E.
  TITLE     Characterization of the piRNA complex from rat testes
  JOURNAL   Science 313 (5785), 363-367 (2006)
   PUBMED   16778019
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC090035.1.
            
            On Apr 20, 2005 this sequence version replaced XM_224930.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC090035.1, SRR8487227.199442.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1741
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16q12.3"
     gene            1..1741
                     /gene="Mak16"
                     /gene_synonym="Rbm13; RGD1311297"
                     /note="MAK16 homolog"
                     /db_xref="GeneID:306526"
                     /db_xref="RGD:1311297"
     exon            1..60
                     /gene="Mak16"
                     /gene_synonym="Rbm13; RGD1311297"
                     /inference="alignment:Splign:2.1.0"
     CDS             46..927
                     /gene="Mak16"
                     /gene_synonym="Rbm13; RGD1311297"
                     /note="RNA binding motif protein 13"
                     /codon_start=1
                     /product="protein MAK16 homolog"
                     /protein_id="NP_001014024.1"
                     /db_xref="GeneID:306526"
                     /db_xref="RGD:1311297"
                     /translation="MQSDDVIWNTLGNKQFCSYKIRTKTQGFCRNEYSLTGLCNRSSC
                     PLANSQYATIKEEKGQCYLYMKVIERAAFPRRLWERVRLNKNYEKALEQIDENLIYWP
                     RFIRHKCKQRFTKITQYLIRIRKLTLKRRKKLVPLSKKVERREKRREEKALIAAQLDN
                     AIEKELLERLKQDTYGDIYNFPIHAFDKALEKQEAESDSEDEEDEEEDEEEDVGKREF
                     VEDDEVEESDLSDFEDMDKLNTDSEEDDESSREEEAHKAKHKGKAPLKGPLRKKRAYV
                     EIEYEQETEPMAKAKAT"
     exon            61..110
                     /gene="Mak16"
                     /gene_synonym="Rbm13; RGD1311297"
                     /inference="alignment:Splign:2.1.0"
     exon            111..220
                     /gene="Mak16"
                     /gene_synonym="Rbm13; RGD1311297"
                     /inference="alignment:Splign:2.1.0"
     exon            221..285
                     /gene="Mak16"
                     /gene_synonym="Rbm13; RGD1311297"
                     /inference="alignment:Splign:2.1.0"
     exon            286..437
                     /gene="Mak16"
                     /gene_synonym="Rbm13; RGD1311297"
                     /inference="alignment:Splign:2.1.0"
     exon            438..492
                     /gene="Mak16"
                     /gene_synonym="Rbm13; RGD1311297"
                     /inference="alignment:Splign:2.1.0"
     exon            493..567
                     /gene="Mak16"
                     /gene_synonym="Rbm13; RGD1311297"
                     /inference="alignment:Splign:2.1.0"
     exon            568..678
                     /gene="Mak16"
                     /gene_synonym="Rbm13; RGD1311297"
                     /inference="alignment:Splign:2.1.0"
     exon            679..744
                     /gene="Mak16"
                     /gene_synonym="Rbm13; RGD1311297"
                     /inference="alignment:Splign:2.1.0"
     exon            745..1707
                     /gene="Mak16"
                     /gene_synonym="Rbm13; RGD1311297"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggctgctttc ctgctcctaa cgcggcgagc tgatccgccg gcaccatgca gtcggacgat
       61 gttatctgga atacactagg aaacaaacaa ttttgttctt acaaaataag aaccaagact
      121 cagggctttt gcagaaatga atatagtctg acaggtctgt gcaaccggtc gtcctgtccc
      181 ctggcaaata gtcagtatgc taccattaaa gaagagaaag ggcagtgcta cctgtacatg
      241 aaggtcatag agcgcgcagc cttccctcgg cgtctctggg agcgggtccg gcttaataaa
      301 aactatgaga aagcactgga acaaatagat gaaaatttga tttactggcc ccgctttatc
      361 cgacacaaat gtaagcagag gtttaccaag ataacccagt acctgattcg gattagaaaa
      421 cttacactga agcgaaggaa gaaacttgtt cctttgagta agaaggttga aagaagggaa
      481 aaacgaagag aggaaaaggc attaatagcc gcccagctgg acaatgccat tgagaaggaa
      541 ttgctggaga gactgaaaca agacacgtat ggcgacatct acaacttccc catccacgcc
      601 ttcgacaagg ccctggagaa acaggaagca gaaagtgact ctgaagatga agaagatgag
      661 gaggaagatg aagaagagga tgtggggaaa agagagtttg tagaagatga tgaggtagag
      721 gaaagtgacc tgagtgactt tgaggatatg gataagctga acactgacag tgaggaagat
      781 gatgaatcct cccgtgaaga agaggctcat aaggccaaac acaaaggcaa agcacccttg
      841 aaaggacctt tgcggaaaaa acgggcctat gtggaaatag agtatgaaca ggagacagag
      901 cccatggcca aagccaaagc cacatgagtt cgagtcccac ctttatcctg cagtagtcaa
      961 cacttgcgct gtgctctttt gtgctctatt tcctaaagta tttatattgt taatatttac
     1021 accgcttcag tggagcagaa acctggagtg agtacggaag agccacgagt tgtgaggagt
     1081 atttttataa catgtgctat gacagcttga gcccaaggag ccgcactggc actggctgta
     1141 aatatttcta aactacaagt gctgaatcct ctcctcccaa tttttactta gaaacatcag
     1201 tatttcaatt tttttcttac gtggacaaat tggagaagat aaaatttcaa cttatatttt
     1261 aatacaaaaa tagatttttt ttaaatgccc atgagtccgt ccatatgaac ggggtaagaa
     1321 gagcagtctt tcctgctggt tagtcatctc cagggtcctc gccgggagcc tctgcagagc
     1381 cctgcacctt cctgatgcag ctcaccactg tgctgtcgtc acaggacagg gcgatgttag
     1441 ccagaagacc ctgaaacaca agagcaacca ggcgctggtt tccccacagc ctttactctt
     1501 ttatcacata ctgaaaaggt gagagtgcat ggcctagggg agagtgccat cagacagcag
     1561 tttctcagaa ccggccctcg cttgtagacg gctggctcgg aagaaccccc tccactctag
     1621 ccaaggtgtc agttggaccc tcagctggaa aactgcccaa accagggctg cagggcagtg
     1681 gccaaataaa ccgaaaacag ctggccaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1741 a
//
