LOCUS       NM_001014109            1450 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus MAGI family member, X-linked (Magix), mRNA.
ACCESSION   NM_001014109 XM_228764
VERSION     NM_001014109.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1450)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC078960.1.
            
            On Apr 20, 2005 this sequence version replaced XM_228764.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC078960.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132307, SAMEA5760384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1450
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq12"
     gene            1..1450
                     /gene="Magix"
                     /note="MAGI family member, X-linked"
                     /db_xref="GeneID:317379"
                     /db_xref="RGD:1549729"
     exon            1..211
                     /gene="Magix"
                     /inference="alignment:Splign:2.1.0"
     CDS             163..1143
                     /gene="Magix"
                     /codon_start=1
                     /product="PDZ domain-containing protein MAGIX"
                     /protein_id="NP_001014131.1"
                     /db_xref="GeneID:317379"
                     /db_xref="RGD:1549729"
                     /translation="MDSHAGNTADPRGSRRGVGLQGSGSPRARQLLERLDARPLAARA
                     AADLSALVRKAGATLRLRHKEAISGLDSADIEVADSRLPHATLVEHRPQHQRSDTQGP
                     RMEPLPVIQNKASYASRLPQATGRFSVELVRGPAGFGLTLSGGRNVSGNVPLAVCGLL
                     KDGPAQRCGHLQAGDLVLYINGQSTRGLTHAQAVEWIRTGGPRLCLVLQRPQEMNGSR
                     SKEVGGGHQKTDRIPDPRGGRMMESRGTISPVHHRPKTRTGPGPSPESVATGHVVRAA
                     EHPAEDLEDRIPGSPGPWLVPSEDRLSRALGIRGGGVQLAQEMAAGRRRH"
     exon            212..358
                     /gene="Magix"
                     /inference="alignment:Splign:2.1.0"
     exon            359..441
                     /gene="Magix"
                     /inference="alignment:Splign:2.1.0"
     exon            442..678
                     /gene="Magix"
                     /inference="alignment:Splign:2.1.0"
     exon            679..850
                     /gene="Magix"
                     /inference="alignment:Splign:2.1.0"
     exon            851..1419
                     /gene="Magix"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cttgcctgca gccaggtagg tcacctcctg gtctgggcgt caggcctggg actagccaga
       61 caacagccga gtccaggcct gggctaggag ccaggtgagc gtgcccctgc gctaaaaact
      121 agtcatcgag ctgctctgag tccaccaggc tcaccacagg tcatggactc tcacgctggg
      181 aacaccgcag accctagagg gagcagaaga ggagttggtt tacaggggtc ggggagcccc
      241 cgagctcgtc agctcctcga gcggctggat gcgcgccccc tggcggcacg agccgcagcg
      301 gacttgtcag cgctagtaag aaaggctgga gccacattgc gcctgcgcca caaggaggct
      361 attagtggtc tggattctgc agatatagaa gttgcagaca gccgtttgcc tcatgccact
      421 cttgtggaac atcgacccca gcatcaaaga tctgacacgc agggtccacg tatggagcca
      481 cttccagtaa tccagaataa ggcaagctat gcttcgagac taccccaagc cactggccga
      541 ttttctgtgg agctggtcag aggtcctgca ggctttggtc tcactttaag tggaggccgt
      601 aatgtatccg ggaatgtgcc gttggctgta tgtggactgc tgaaggatgg gccagcacag
      661 cgatgtggtc atttgcaggc tggtgatctt gtgctctata tcaatggaca gtcaacacgg
      721 ggcctcactc atgcccaggc agtggaatgg attcgcactg gaggcccccg cctttgcctg
      781 gtactccagc ggcctcaaga gatgaatggc agtaggagca aggaggttgg aggaggacat
      841 cagaagacag atcgcatccc agatcctagg ggaggcagga tgatggagtc tcgcggcacc
      901 atttccccag ttcaccaccg gcccaagacc cggactggtc cgggacctag tccagagtca
      961 gtggctactg gccacgtggt tcgcgcagca gagcaccccg cagaagacct ggaagaccgt
     1021 atccctggtt cccctgggcc ctggctggtg ccgagcgagg acaggctctc acgggcttta
     1081 gggattcggg gtggtggcgt gcagctcgct caggagatgg cagccggaag gcggaggcat
     1141 tgagcaccaa cagacagctc agtgctcact aggtgaagtc ccacaaggtt ctaataagcc
     1201 ggaccgccag gctctaagct tttcccttac agatttaaca tggtttagta ccttcccact
     1261 gctcactgca cagtggactg gtccccaccc cttcaagacg ccagtagtat ggccctccca
     1321 gagcccagag cgctcgcacc ccaccacccc cacgtccgcg tgcgcacagc ttctcctagt
     1381 tccctctcag gctgggaggc aataaaatag ctggatccaa aaaaaaaaaa aaaaaaaaaa
     1441 aaaaaaaaaa
//
