LOCUS       NM_001271110            2112 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus MAGE family member D2 (Maged2), transcript
            variant 3, mRNA.
ACCESSION   NM_001271110
VERSION     NM_001271110.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Laghmani K, Beck BB, Yang SS, Seaayfan E, Wenzel A, Reusch B,
            Vitzthum H, Priem D, Demaretz S, Bergmann K, Duin LK, Gobel H,
            Mache C, Thiele H, Bartram MP, Dombret C, Altmuller J, Nurnberg P,
            Benzing T, Levtchenko E, Seyberth HW, Klaus G, Yigit G, Lin SH,
            Timmer A, de Koning TJ, Scherjon SA, Schlingmann KP, Bertrand MJ,
            Rinschen MM, de Backer O, Konrad M and Komhoff M.
  TITLE     Polyhydramnios, Transient Antenatal Bartter's Syndrome, and MAGED2
            Mutations
  JOURNAL   N Engl J Med 374 (19), 1853-1863 (2016)
   PUBMED   27120771
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Ghosh D, Lippert D, Krokhin O, Cortens JP and Wilkins JA.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   3  (bases 1 to 2112)
  AUTHORS   Weber MJ.
  TITLE     Mammalian small nucleolar RNAs are mobile genetic elements
  JOURNAL   PLoS Genet 2 (12), e205 (2006)
   PUBMED   17154719
  REMARK    Erratum:[PLoS Genet. 2007 Feb;3(2):e36]
REFERENCE   4  (bases 1 to 2112)
  AUTHORS   Langnaese K, Kloos DU, Wehnert M, Seidel B and Wieacker P.
  TITLE     Expression pattern and further characterization of human MAGED2 and
            identification of rodent orthologues
  JOURNAL   Cytogenet Cell Genet 94 (3-4), 233-240 (2001)
   PUBMED   11856887
  REMARK    GeneRIF: Expression pattern and further characterization of human
            MAGED2 and identification of rodent orthologues
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            FM059132.1 and BC107467.1.
            
            Transcript Variant: This variant (3) differs in the 5' and 3' UTR
            compared to variant 1. All three variants encode the same protein.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY724507.1, SRR8487231.71770.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-490               FM059132.1         1-490
            491-1957            BC107467.1         463-1929
            1958-2112           BC107467.1         2079-2233
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq12"
     gene            1..2112
                     /gene="Maged2"
                     /note="MAGE family member D2"
                     /db_xref="GeneID:113947"
                     /db_xref="RGD:70899"
     exon            1..71
                     /gene="Maged2"
                     /inference="alignment:Splign:2.1.0"
     exon            72..138
                     /gene="Maged2"
                     /inference="alignment:Splign:2.1.0"
     CDS             94..1950
                     /gene="Maged2"
                     /note="melanoma antigen, family D, 2"
                     /codon_start=1
                     /product="melanoma-associated antigen D2"
                     /protein_id="NP_001258039.1"
                     /db_xref="GeneID:113947"
                     /db_xref="RGD:70899"
                     /translation="MSDTSESGADPARSQGKASEKDSGSMMQDLLTVTQNLEVSETPK
                     AKKAPEVSEAAKVPKASGNPKATEVSKAPEASEAAATQASPTTQLSETQVLAAENKSP
                     AADTKTQKADLQAMTMPATQTKTVSSVTDSKVNTKTPETEAPASQSGADEPEPEGAAV
                     QVQENQDTRPKVKAKNTEKGKHLEGEEDGNSDQSQTSETTGGRRVSKALMASMARRAS
                     RGPIAFWARRASRTRLAAWARRALLSLRSPRARRGKARRRAAKLQSSQEPEAPPPRDV
                     ALLQGRANDLVKYLLAKDQTKIPIRRSDMLKDIIKEYTDVYPEIIERAGYSLEKVFGI
                     QLKEIDKNDHLYILLSTLEPTDAGILGTTKDSPKLGLLMVLLSIIFMNGNRSSEAVIW
                     EVLRKLGLRPGIHHSLFGDVKKLITDEFVKQKYLDYARVPNSNPPEYEFFWGLRSYYE
                     TSKMKVLKFACKVQKKDPKEWAAQYREAMEADLKAAAEAAAEAKARAEIRAQMGIGLG
                     SENAAGPCNWDEADIGPWAKARIQAGAETKAKAQESSGASAGTGAGASASAGTSVSTS
                     GTAGSGANAGASGGFSTNPSLTASLTFGLFAGLSGAGASNSSSSGACGFSYK"
     exon            139..630
                     /gene="Maged2"
                     /inference="alignment:Splign:2.1.0"
     exon            631..939
                     /gene="Maged2"
                     /inference="alignment:Splign:2.1.0"
     exon            940..1003
                     /gene="Maged2"
                     /inference="alignment:Splign:2.1.0"
     exon            1004..1083
                     /gene="Maged2"
                     /inference="alignment:Splign:2.1.0"
     exon            1084..1178
                     /gene="Maged2"
                     /inference="alignment:Splign:2.1.0"
     exon            1179..1258
                     /gene="Maged2"
                     /inference="alignment:Splign:2.1.0"
     exon            1259..1301
                     /gene="Maged2"
                     /inference="alignment:Splign:2.1.0"
     exon            1302..1364
                     /gene="Maged2"
                     /inference="alignment:Splign:2.1.0"
     exon            1365..1479
                     /gene="Maged2"
                     /inference="alignment:Splign:2.1.0"
     exon            1480..1957
                     /gene="Maged2"
                     /inference="alignment:Splign:2.1.0"
     exon            1958..2085
                     /gene="Maged2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggagggcag tatctgagtt tcggaggggc ttggagagag tggacacact caggaattgc
       61 aggaggacga gctttgccag gtgaacttga gacatgtctg acacaagtga gagtggtgca
      121 gatccagctc gctctcaggg caaagcttca gaaaaggaca gcggctccat gatgcaggac
      181 ctgttgactg tgacccagaa cttggaggtc tcagagacac caaaggctaa aaaggcacca
      241 gaggtctcag aagctgcaaa ggtccccaaa gcctctggga acccaaaggc gacagaggtc
      301 tcaaaggccc cagaggcttc ggaggcagct gccacccagg cctcacctac cacacagctg
      361 agtgagaccc aggttctggc agctgaaaac aagagtccag cagctgacac caagacacag
      421 aaggctgacc tgcaggctat gacaatgcct gcaacccaga ccaaaacggt cagttctgtt
      481 accgattcta aggtcaatac aaagactccg gagaccgagg ctcctgcctc tcagtctggg
      541 gcagatgaac cagagcctga gggtgcagct gtccaagttc aggagaatca ggatactcgg
      601 cccaaggtca aagccaagaa taccgaaaag gggaaacacc tggaagggga agaggacggc
      661 aacagtgatc agagtcagac ttcagaaacc acaggtggtc ggagggtctc aaaggcccta
      721 atggcctcca tggcccgtag agcttcaagg ggacccatag cgttctgggc ccgcagggca
      781 tcaaggactc ggttggctgc ctgggctcgg agagctttgc tctccctgag gtcacctaga
      841 gctcggagag gcaaggcccg aagaagagct gccaagctgc agtcatccca ggaacccgaa
      901 gcacccccac ccagagatgt ggccctttta caaggaaggg caaatgattt ggtgaagtac
      961 ctgttggcta aagatcagac aaagattccc atcaggcgct cagatatgct gaaggacatc
     1021 atcaaagaat atacggatgt ataccctgaa atcattgaac gagcaggcta ttccttggag
     1081 aaggtatttg gaatccaact gaaagaaatt gacaagaatg accacttgta tattcttctc
     1141 agtaccttag agccaactga tgcaggcatc ctgggaacga ccaaggactc acctaagctg
     1201 ggcctcctca tggtgcttct tagcatcatc ttcatgaatg gaaatcggtc cagtgaggct
     1261 gtcatctggg aggtgctgcg caagttgggg ctgcgccctg ggatacatca ctcactcttt
     1321 ggggatgtga agaagctcat tactgatgag tttgtgaagc agaagtacct ggactacgct
     1381 agagtaccca atagcaatcc tcctgagtat gagttcttct ggggcctacg ctcttactac
     1441 gagaccagca agatgaaagt tctcaagttt gcctgtaagg tgcaaaagaa agatcccaaa
     1501 gaatgggcag ctcagtaccg agaggcaatg gaagcagatt tgaaggctgc ggctgaggct
     1561 gctgccgaag ccaaggcgag ggctgagatt agagctcaga tgggcattgg gcttggctct
     1621 gagaatgctg ctgggccctg caactgggat gaagctgata ttggaccctg ggcaaaggcc
     1681 cggatccagg cgggagctga aactaaagcc aaagcccaag aaagtagtgg tgccagtgct
     1741 ggtactggtg ccggtgccag tgccagtgct ggtaccagtg tcagtaccag tggcactgct
     1801 ggttctggtg ctaatgctgg ggccagtggg ggcttcagta ccaaccccag tctgactgcc
     1861 agtctcacgt ttgggctctt cgctggcctt agtggagctg gggccagtaa cagtagcagc
     1921 tctggtgcct gtggtttctc ctacaagtga gatacagatt gctaatcaca gcgtcttctt
     1981 ctcaagccag ggtgcactct cagacactta ttcaatgcag cactctaggc aaccgctatc
     2041 aatcaattga agtcgacact ctatattaaa tctatttgcc atttcaaaaa aaaaaaaaaa
     2101 aaaaaaaaaa aa
//
