LOCUS       NM_001128493            1614 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus MAGE family member B-like 1 (Magebl1), mRNA.
ACCESSION   NM_001128493 XM_001063718 XM_228602
VERSION     NM_001128493.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1614)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1614)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC158628.1.
            
            On or before Jun 16, 2008 this sequence version replaced
            XM_228602.3, XM_001063718.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC158628.1, CV120683.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq22"
     gene            1..1614
                     /gene="Magebl1"
                     /gene_synonym="RGD1559523"
                     /note="MAGE family member B-like 1"
                     /db_xref="GeneID:302438"
                     /db_xref="RGD:1559523"
     exon            1..42
                     /gene="Magebl1"
                     /gene_synonym="RGD1559523"
                     /inference="alignment:Splign:2.1.0"
     exon            43..112
                     /gene="Magebl1"
                     /gene_synonym="RGD1559523"
                     /inference="alignment:Splign:2.1.0"
     exon            113..1588
                     /gene="Magebl1"
                     /gene_synonym="RGD1559523"
                     /inference="alignment:Splign:2.1.0"
     CDS             174..1196
                     /gene="Magebl1"
                     /gene_synonym="RGD1559523"
                     /note="melanoma antigen, family B; melanoma antigen,
                     family B-like 1"
                     /codon_start=1
                     /product="MAGE family member B-like 1"
                     /protein_id="NP_001121965.1"
                     /db_xref="GeneID:302438"
                     /db_xref="RGD:1559523"
                     /translation="MPRGHKKKGHSRAKRHHACGGSQGLQGDHRMSGTGSASLPVSQA
                     NSPSISEACTPWGAVFSASSGANTSSTGFDKGAEGAVGCGDAECLGTFKAESIPQLIS
                     NDALTKNASMLVEFLLEKFKKSEEFTDADMQRVVSKKYKIQFSDILRKSSLRMEMIFG
                     MQLKKINDSSETYAIVSKLGLSTAEILSGKRGLPKMGLLMTILGLIFTKGNRATEEEI
                     WKFLNILGVYAGKKHLIFGEPRRFITKDLVEQKYLEICKMSKGKSPKYDFLWGSRAHI
                     ETSKMKVLEVWAKINDTIPSFFPTMYDEALKEKIERAERESVVLVPTAAAGRDCPLCM
                     SCSFYK"
ORIGIN      
        1 cggcctgtag ggttgaggcc ttcgaatgtg tcctctggtc aatgttcttg ggattcaaac
       61 tgaccaagag aatagtagtc ctaaccaagc tgaacaggag aacaggaaca cggttcctgc
      121 tttgccaact ctcctgacca tagccctgcc tgttgcctct gacccctgtt atcatgccac
      181 ggggccacaa gaagaagggc cactcccgtg ccaaacgtca ccatgcatgt gggggtagcc
      241 aaggtctcca gggtgatcac cgtatgtcag gcacagggtc agcatctctt cctgttagtc
      301 aagctaattc cccaagcatt tctgaggcct gcactccttg gggagctgtg ttttctgcat
      361 cttctggtgc aaatacgtcc agtacaggct ttgataaagg ggctgagggt gctgttggct
      421 gtggtgatgc agaatgtcta ggtaccttca aagcagaatc catccctcag ctgatatcta
      481 atgatgctct tactaagaat gctagtatgc tggtagagtt cctgctggag aaatttaaga
      541 aaagtgaaga gtttacagat gctgatatgc agagggtggt cagcaagaaa tacaagatac
      601 aattttctga catcctgagg aaatcttccc tccgcatgga aatgatcttt ggaatgcagt
      661 taaagaaaat caatgacagt agtgaaacct atgctattgt cagcaaacta ggtctctcca
      721 ctgctgaaat tctaagtggc aagagggggt tgccaaagat gggtcttctg atgaccatct
      781 tgggtctgat tttcacaaaa ggcaaccgtg ccaccgagga agagatctgg aaattcctga
      841 atatattagg agtatatgca gggaagaagc acttgatttt tggggaaccc cgaaggttca
      901 tcaccaaaga tctggttgag caaaagtacc ttgagatctg caaaatgtcc aagggtaaat
      961 ccccaaaata tgatttcctg tggggttccc gggcccatat agaaaccagt aaaatgaaag
     1021 tcctagaagt ttgggctaag atcaatgaca ccattcccag cttcttccct actatgtatg
     1081 atgaagctct taaagaaaaa atagagagag cagaacgtga atctgtagtc ttggttccca
     1141 cagctgctgc gggcagggat tgtcctctat gcatgtcctg cagcttctac aaatagctgc
     1201 aaccaaagtt gagttttcac ttcctgtgtg aaatgtagtt gctttctatg aagtagagtt
     1261 catgggttac aggaataaag cttcttttat ttgtctatac attagtaaat gataagtata
     1321 tttgcttttg tgaactgcaa atattccact aatggaaagt taatttgttt cacaatcttt
     1381 gtttctcagt gctatgattg atacatttat tgctgcattt caatgttaaa accaagaact
     1441 ctttacttta aaaaccaatt ggaaaatttc cacaagttcc tttttagtat tacataagaa
     1501 aacatgaatt tgtaaaagtg attctcatgg aaatgtaatg tcacatattg gtgaaacaaa
     1561 tacagtaata aactaattaa ttgtgtgaaa aaaaaaaaaa aaaaaaaaaa aaaa
//
