LOCUS       NM_001106946            1331 bp    mRNA    linear   ROD 08-APR-2024
DEFINITION  Rattus norvegicus MAGE family member B5 (Mageb5), mRNA.
ACCESSION   NM_001106946 XM_001063480 XM_006257012 XM_228606
VERSION     NM_001106946.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1331)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            On or before Aug 3, 2021 this sequence version replaced
            XM_006257012.3, NM_001106946.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.32624.1,
                                           SRR26360181.3133554.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-107               JAXUCZ010000021.1  60457626-60457732   c
            108-1331            JAXUCZ010000021.1  60454155-60455378   c
FEATURES             Location/Qualifiers
     source          1..1331
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq22"
     gene            1..1331
                     /gene="Mageb5"
                     /gene_synonym="Mageb17; RGD1563078"
                     /note="MAGE family member B5"
                     /db_xref="GeneID:302442"
                     /db_xref="RGD:1563078"
     exon            1..107
                     /gene="Mageb5"
                     /gene_synonym="Mageb17; RGD1563078"
                     /inference="alignment:Splign:2.1.0"
     exon            108..1331
                     /gene="Mageb5"
                     /gene_synonym="Mageb17; RGD1563078"
                     /inference="alignment:Splign:2.1.0"
     CDS             113..1213
                     /gene="Mageb5"
                     /gene_synonym="Mageb17; RGD1563078"
                     /note="melanoma antigen family B, 17; melanoma antigen
                     family B, 5"
                     /codon_start=1
                     /product="melanoma-associated antigen B5"
                     /protein_id="NP_001100416.1"
                     /db_xref="GeneID:302442"
                     /db_xref="RGD:1563078"
                     /translation="MPRGQKNKHRKRLKNKKHNQEKGHPEKDESQDKGHHKRDDSQDH
                     KEAAQDSAAIEEMPPCSSSSVPGKILETPPVSETNSDVGWPSCIPSPVTICSDDLDFD
                     DEIYCQCGGNSLYSEYRTCQNIPCKHCLDMYVAFVEQYVLYKFKMKQLIVRKDLINVI
                     EPKYQYRFNEISKRAFENIETVFGVSVIEIDSTNHIYDLVSNLKLPNKGRVCAGRGLP
                     KTGLLMTILAMIFMKGNSVSEEDIWKFLNFMQVYPGRKHFIYREPRKLITQDFVRLKY
                     LEYGQIPNSDPPCYQFQWGPKAYAETTKMKVLEFMAKGSGVEPSTFSVQYAEALKEEN
                     QKIKIRKWYPILAQKHCLGHGHHHIHKVMTPQ"
ORIGIN      
        1 tgagtttcac ttactcgcca attcattcag cttaggaata cttctaggtt tgtccagagg
       61 acattgattc ttctatgatg ataaggagaa ttgtcctcta ctgaagacca ccatgcctag
      121 gggtcagaag aataagcatc gcaaacgctt gaagaataag aaacacaacc aagagaaagg
      181 ccatcctgaa aaagatgagt ctcaggataa aggccatcat aaaagagatg attctcaaga
      241 tcataaggaa gcagcacagg atagtgcagc aatagaagaa atgcctcctt gctcttcatc
      301 ttcggttccg gggaagattc ttgagacgcc acctgtttct gaaacaaata gtgatgttgg
      361 atggccttcc tgtattccat ctcctgtcac tatttgtagt gatgatttag attttgatga
      421 tgaaatttac tgtcagtgtg gcggaaactc attatactca gaatatcgaa cctgccaaaa
      481 tattccgtgc aaacattgct tagatatgta tgtggctttt gtggagcagt atgtactcta
      541 caaatttaaa atgaaacaac tcattgtcag aaaagattta ataaatgtta ttgaaccaaa
      601 gtaccaatac agatttaatg agatatccaa gagagctttt gagaacattg aaactgtgtt
      661 cggagtaagt gtgattgaaa ttgactcaac taatcacatt tatgatctag tcagcaacct
      721 aaaactaccc aataaaggaa gggtttgtgc tggcagaggt ttaccaaaaa ctggtcttct
      781 tatgactatc ctggctatga ttttcatgaa gggtaactct gtttctgagg aagacatttg
      841 gaaattccta aattttatgc aagtgtaccc agggaggaag cattttattt atagagagcc
      901 acggaagctc atcactcaag attttgtgag actgaagtac ctggaatatg ggcagatacc
      961 caatagtgat cctccatgct atcagttcca atggggtcca aaagcttatg ctgaaactac
     1021 caagatgaaa gtcctagaat ttatggctaa aggcagtggt gttgaaccta gtactttttc
     1081 agtacaatat gcagaagctt tgaaagaaga aaatcaaaag atcaagataa gaaaatggta
     1141 tcccatcctg gcacaaaaac attgtctagg acatggccat caccatatcc ataaggttat
     1201 gacacctcag taaattatga gacattacct tcagacaaga aaacacaaca tcacatttga
     1261 aattttgaag caagtaagaa aatcacaaca agagtgtgaa atatcaagta ataaagaata
     1321 acaaataagg a
//
