LOCUS       XM_039099750            2428 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus MAGE family member B4 (Mageb4),
            transcript variant X4, mRNA.
ACCESSION   XM_039099750
VERSION     XM_039099750.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2428
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2428
                     /gene="Mageb4"
                     /gene_synonym="RGD1561997"
                     /note="MAGE family member B4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 long
                     SRA read, 14 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:317271"
                     /db_xref="RGD:1561997"
     CDS             662..1612
                     /gene="Mageb4"
                     /gene_synonym="RGD1561997"
                     /codon_start=1
                     /product="melanoma-associated antigen B4 isoform X2"
                     /protein_id="XP_038955678.1"
                     /db_xref="GeneID:317271"
                     /db_xref="RGD:1561997"
                     /translation="MPRGQKSKNRSRAKRQQARREVPEVQPTAEKAGSSVDESVGSSF
                     PDGSAPQGVKTPGSFGAGVSCAGSGIGVRNAAGFADQKSSDGTQAGASVQHTLKDPIM
                     RKASVLIEFLLDKFKMKEAVTKSEMLAVVNKKYKEHFSEILRRTSARLELVFGLELKE
                     IDASTQSYLLVGKLGLSTEGSLSSNWGLPKTGLLMSILGVIFMKGNRATVQEVWQFLN
                     GVGVYAGKKHLIFGEPEAFITDLVQENYLAYRQVPSSDPPSYEFLWGPRAHAETTKMK
                     VLEVLAKVNGTVPSAFPNLYQLALRDQAEGTKKKSSRQGC"
ORIGIN      
        1 tccatcattt ttttttttta gcgtgttaat tcggttgctg agagtacaag gttccacctc
       61 tgtacggtgg ccttattggg tcattctcta caggcctagc ctctgcccgt gtatggaagc
      121 ctaattaggt gttttggtgg taattctcca cccgtgtacg gtagccttgg tgggtctagt
      181 cacagagaac tcgcaaacca tcttcggaag tgacctaata ggtttgtaca ggcattgatt
      241 tctgccacta gatggtcatt ttgttaggtc tatatccaga ggattccatc cgtttcagga
      301 ggggttagga gggtttgtag gagcagaaag accttccctt gaatggtgat cttagtgttt
      361 ctgtctctac aggctctgtc cccggcagaa gcctaatggt ttctaagggc taaagtctca
      421 gcccctttac ggtggccctg atgggtctaa cttcagagag cgcgtgaact aaattctgag
      481 gtgtcttaac acgtctgtac gggcattgat gtccacatct ctatggtgcc tttgatgggt
      541 ctgtattcac agtagtcagt ccgtccgaga aggggtttgc agaaaagagg ttgatccacg
      601 agtacgggaa acctgattcc tgcctgtcag ctcttctact tcagccttga gcccagtcat
      661 catgcctagg ggtcaaaaga gtaagaaccg ctcccgtgca aaacgacagc aggcacgcag
      721 ggaggtccca gaagttcagc ccactgcaga gaaagcaggg tcttctgttg acgagagcgt
      781 tggctccagc ttccctgatg gttctgctcc tcagggtgtg aaaacccctg gatcttttgg
      841 tgcaggtgtg tcctgcgcag gctctggtat aggtgttagg aatgctgctg gttttgctga
      901 tcagaaaagt tcagatggca cccaggcagg ggcttctgtt cagcacacac ttaaagatcc
      961 tatcatgagg aaggctagtg tgctgataga attcctgcta gataaattta agatgaaaga
     1021 agcagttaca aagagtgaaa tgctggcagt agtcaacaag aagtataagg aacatttctc
     1081 tgagatcctc cggagaactt ctgcacgcct agagttagtc tttggtcttg aattgaagga
     1141 aatagatgcc agcactcaat cctatttgct ggtgggcaaa ctgggtcttt ccactgaggg
     1201 aagtttgagt agtaattggg ggttgcccaa gacaggtctc ctgatgtcca tcctaggtgt
     1261 gatcttcatg aagggtaacc gtgccactgt gcaagaggtc tggcaatttc tgaatggagt
     1321 gggggtatat gctgggaaga agcacttaat ctttggagag cctgaggcat ttataacaga
     1381 tctagtgcag gaaaattacc tggcgtaccg ccaggtacct agcagtgatc ccccaagcta
     1441 tgagttcctg tggggaccca gagcccatgc tgaaaccacc aagatgaaag tcctggaagt
     1501 tttagctaag gtcaatggca ctgtccctag tgccttccct aatctctatc agttggctct
     1561 tagagatcag gcagagggta ccaagaagaa gagttcaagg caaggctgtt gattccaagg
     1621 tcctatccca taagtcctct aatatgtaat tgagtctgtt ctataatgtt tgaagaacag
     1681 tcaggctcct aatcagtaga gttcatagca tttcagaacc agtatgtata cattcttggc
     1741 ctgttataca ttattagaat ggaggctact attgttattt ttcaattttt ttttaactaa
     1801 acagtgcttt gagccttgct ttctgttaag tgcataaaga ggtaactgtc atttgtcagt
     1861 tttgttattt tgcaacaaac tggaaaacct taaattgttt ttattaaaca ttgtataaca
     1921 tcgcattgga gaagggattt tcacggcagt gtgatatcat acagtggtga aacaacagtg
     1981 aattgggaaa gttactattg ttactttgga aagttttata tatgaatgtg attgttagtt
     2041 tcttactttt ttttgtataa tgttacgtga aataaagttg gacttgatga ctactcaaat
     2101 ttgtaagaaa gtaaattata gtgctctatt aatttattat tttcttcaag gattaactat
     2161 gcattggttc tctgtaagtt tctccagtag cactggatct agtagaaaaa aacaaaatat
     2221 agacactgac aatgagtaat tggagtctag aggcagctac atactatcta agatagtaag
     2281 agaataacat actatctaag atataaatga catagagacg atatgaggaa catgacattt
     2341 tcctgaaagc taagtataaa ttattgtgga atacattaca ataggcaatt caaatagtgt
     2401 acatgaacta aaatgctgct caccaaat
//
