LOCUS       NM_001177683            1606 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus MAGE family member B4 (Mageb4), mRNA.
ACCESSION   NM_001177683 XM_002727566 XM_002730245
VERSION     NM_001177683.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1606)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1606)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC158636.1.
            
            On or before May 13, 2010 this sequence version replaced
            XM_002730245.1, XM_002727566.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC158636.1, CV121022.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1606
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq22"
     gene            1..1606
                     /gene="Mageb4"
                     /gene_synonym="RGD1561997"
                     /note="MAGE family member B4"
                     /db_xref="GeneID:317271"
                     /db_xref="RGD:1561997"
     exon            1..57
                     /gene="Mageb4"
                     /gene_synonym="RGD1561997"
                     /inference="alignment:Splign:2.1.0"
     exon            58..99
                     /gene="Mageb4"
                     /gene_synonym="RGD1561997"
                     /inference="alignment:Splign:2.1.0"
     exon            100..1579
                     /gene="Mageb4"
                     /gene_synonym="RGD1561997"
                     /inference="alignment:Splign:2.1.0"
     CDS             146..1096
                     /gene="Mageb4"
                     /gene_synonym="RGD1561997"
                     /note="melanoma antigen, family B; melanoma antigen family
                     B, 4"
                     /codon_start=1
                     /product="melanoma-associated antigen B4"
                     /protein_id="NP_001171154.1"
                     /db_xref="GeneID:317271"
                     /db_xref="RGD:1561997"
                     /translation="MPRGQKSKNRSRAKRQQARREVPEVQPTAEKAGSSVDESVGSSF
                     PDGSAPQGVKTPGSFGAGVSCAGSGIGVRNAAGFADQKSSDGTQAGASVQHTLKDPIM
                     RKASVLIEFLLDKFKMKEAVTKSEMLAVVNKKYKEHFSEILRRTSARLELVFGLELKE
                     IDASTQSYLLVGKLGLSTEGSLSSNWGLPKTGLLMSILGVIFMKGNRATVQEVWQFLN
                     GVGVYVGKKHLIFGEPEAFITDLVQENYLAYRQVPSSDPPSYEFLWGPRAHAETTKMK
                     VLEVLAKVNGTVPSAFPNLYQLALRDQAEGTKKKSSRQGC"
ORIGIN      
        1 cgctccagaa tctaggaaga agaggcttgg aatacagtct gcagagatta atcctagggt
       61 ttgcagaaaa gaggttgatc cacgagtacg ggaaacctga ttcctgcctg tcagctcttc
      121 tacttcagcc ttgagcccag tcatcatgcc taggggtcaa aagagtaaga accgctcccg
      181 tgcaaaacga cagcaggcac gcagggaggt cccagaagtt cagcccactg cagagaaagc
      241 agggtcttct gttgacgaga gcgttggctc cagcttccct gatggttctg ctcctcaggg
      301 tgtgaaaacc cctggatctt ttggtgcagg tgtgtcctgc gcaggctctg gtataggtgt
      361 taggaatgct gctggttttg ctgatcagaa aagttcagat ggcacccagg caggggcttc
      421 tgttcagcac acacttaaag atcctatcat gaggaaggct agtgtgctga tagaattcct
      481 gctagataaa tttaagatga aagaagcagt tacaaagagt gaaatgctgg cagtagtcaa
      541 caagaagtat aaggaacatt tctctgagat cctccggaga acttctgcac gcctagagtt
      601 agtctttggt cttgaattga aggaaataga tgccagcact caatcctatt tgctggtggg
      661 caaactgggt ctttccactg agggaagttt gagtagtaat tgggggttgc ccaagacagg
      721 tctcctgatg tccatcctag gtgtgatctt catgaagggt aaccgtgcca ctgtgcaaga
      781 ggtctggcaa tttctgaatg gagtgggggt atatgttggg aagaagcact taatctttgg
      841 agagcctgag gcatttataa cagatctagt gcaggaaaat tacctggcgt accgccaggt
      901 acctagcagt gatcccccaa gctatgagtt cctgtgggga cccagagccc atgctgaaac
      961 caccaagatg aaagtcctgg aagttttagc taaggtcaat ggcactgtcc ctagtgcctt
     1021 ccctaatctc tatcagttgg ctcttagaga tcaggcagag ggtaccaaga agaagagttc
     1081 aaggcaaggc tgttgattcc aaggtcctat cccataagtc ctctaatatg taattgagtc
     1141 tgttctataa tgtttgaaga acagtcaggc tcctaatcag tagagttcat agcatttcag
     1201 aaccagtatg tatacattct tggcctgtta tacattatta gaatggaggc tactattgtt
     1261 atttttcaat ttttttttaa ctaaacagtg ctttgagcct tgctttctgt taagtgcata
     1321 aagaggtaac tgtcatttgt cagttttgtt attttgcaac aaactggaaa accttaaatt
     1381 gtttttatta aacattgtat aacatcgcat tggagaaggg attttcacgg cagtgtgata
     1441 tcatacagtg gtgaaacaac agtgaattgg gaaagttact attgttactt tggaaagttt
     1501 tatatatgaa tgtgattgtt agtttcttac ttttttttgt ataatgttac gtgaaataaa
     1561 gttggacttg atgactacta aaaaaaaaaa aaaaaaaaaa aaaaaa
//
