LOCUS       NM_001013962            1693 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus MAGE family member A13 (Magea13), mRNA.
ACCESSION   NM_001013962 XM_229175
VERSION     NM_001013962.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1693)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1693)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC083676.1.
            
            On Apr 20, 2005 this sequence version replaced XM_229175.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC083676.1, CK598291.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1693
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq36"
     gene            1..1693
                     /gene="Magea13"
                     /gene_synonym="Magea11"
                     /note="MAGE family member A13"
                     /db_xref="GeneID:302845"
                     /db_xref="RGD:1359246"
     exon            1..76
                     /gene="Magea13"
                     /gene_synonym="Magea11"
                     /inference="alignment:Splign:2.1.0"
     exon            77..208
                     /gene="Magea13"
                     /gene_synonym="Magea11"
                     /inference="alignment:Splign:2.1.0"
     exon            209..1669
                     /gene="Magea13"
                     /gene_synonym="Magea11"
                     /inference="alignment:Splign:2.1.0"
     CDS             258..1202
                     /gene="Magea13"
                     /gene_synonym="Magea11"
                     /note="melanoma antigen family A, 11"
                     /codon_start=1
                     /product="melanoma-associated antigen 11"
                     /protein_id="NP_001013984.1"
                     /db_xref="GeneID:302845"
                     /db_xref="RGD:1359246"
                     /translation="MSHRQKHDQGLEGQLGEEVPAAKEVSAAEESQDTSSSSASVQAT
                     APSKASKVSGDQAAGGQSTSKAYLYSKFLLNSNLQKKVTDLVKFLSFKYITNEPVTEA
                     EIQKHVVKEYKGYYALIFRHACECMEVVFGIEVKEVDSLNHTYKLLKILDLTYDGRIS
                     NEEGIPKTGLLVLILGVIFMEGNRASEKKIWDVLSVVGMYPDRHDFICGDPRKFITED
                     LVLENYLVYQPIPNSDPTSYEFLWGPRAQAETSKMKVLQFFSKVAGSSPTSFTALYKE
                     ALKDEEERARALLASTAISTAADNLGSGEKPSSVSHPE"
ORIGIN      
        1 tgggaactga gagtctttgg ctaagaaaag gcaagaatca agccgtacag agagtcactc
       61 tggaccttaa accaagcttc ctgtaataag tggatctgac gtatagtgac ttccgttctg
      121 gctatctgaa gaaggagacg actcgaagca gtgtgtggac tgcttccttc agctgaagga
      181 agcgttgcag gccctgtggt gcttgaagac cactctctat aaactttctt tggccactta
      241 ttggaaaaca aattagaatg tcccacaggc agaagcatga tcaaggcctt gagggccagc
      301 taggagagga ggttcctgca gctaaagagg tatctgctgc tgaggagtcc caggacacct
      361 cctcatcctc tgcttccgtc caagccactg caccaagcaa agcaagtaaa gtttctggtg
      421 atcaagcagc gggaggtcaa agtacctcaa aggcctacct atactccaag tttttgctca
      481 acagtaacct tcagaagaag gttactgatt tggtgaagtt tctgagtttc aagtatataa
      541 caaatgagcc tgtcacagaa gcagaaattc agaagcatgt tgttaaggag tacaaaggct
      601 actatgcatt gatcttcagg catgcctgtg aatgcatgga agtggtcttt ggcattgagg
      661 taaaggaagt ggattccttg aatcacactt acaagctcct gaaaatcctt gacctcactt
      721 atgatgggcg catcagcaat gaagagggga taccgaagac cggcctcctg gtgctgatcc
      781 ttggtgtaat cttcatggaa ggcaaccgtg cctctgagaa aaagatctgg gatgtgctca
      841 gtgtcgttgg tatgtatcct gaccggcacg attttatatg cggggatccc agaaagttca
      901 tcactgaaga tttggtgtta gagaattacc tggtgtacca gcctataccc aacagtgatc
      961 ctacaagcta tgagttcctg tggggcccaa gagcccaagc tgaaacaagc aaaatgaaag
     1021 tcctgcagtt tttctccaag gttgctggga gtagccctac ttccttcact gctttatata
     1081 aggaagctct gaaagatgaa gaggagagag cccgggctct ccttgcatcc acagccatat
     1141 ctactgctgc ggataatttg ggttctgggg agaagcccag cagtgtctcc caccctgagt
     1201 aaattaggct ggtttttcat accatgttta aagagagcaa tcaagccttc aagcacaaga
     1261 tatttcagtt tcttcttact ttctgtacag tttcagatgt ttcactttaa aatgtttatt
     1321 agcttcagtc tagactcatt cggtgtatta ctcatgcatg tattgctgta tttcagaata
     1381 agagccttgt tattgttaaa aacgaattga gaacattttc agccttgaga cctagaggaa
     1441 gatcaaatag cattgtgact aagtttttct tagaaattgg aatcttgtta aatagtatct
     1501 gtaactgcaa gaaagatgta aaaaaaaact tggttgatgc tggaattcct gtattctgtt
     1561 aatctgcatt gtaaaactaa agatgtacac ctcacacact tggtttagtc aagactgcat
     1621 tagaaattaa agcttaataa actgtactga cttgttttct cagcaaaaaa aaaaaaaaaa
     1681 aaaaaaaaaa aaa
//
