LOCUS       XM_039097958            8794 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus MAF bZIP transcription factor (Maf),
            transcript variant X3, mRNA.
ACCESSION   XM_039097958
VERSION     XM_039097958.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039097958.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8794
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..8794
                     /gene="Maf"
                     /gene_synonym="cMaf; Maf2"
                     /note="MAF bZIP transcription factor; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 30 ESTs, 11 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     41 samples with support for all annotated introns"
                     /db_xref="GeneID:54267"
                     /db_xref="RGD:3034"
ORIGIN      
        1 ttgctttaaa ctcttctcgc tggatcagag gctttaaaat cttttttcat ctcggagctg
       61 tagctcgagc tgcttgtccg ctcggcctct ccccccaccc ttttgctctc ggccttgcct
      121 tggtccagga ctttgccatt ttgctttaaa gcaaaaaaag aaagaaagaa agaaaagaaa
      181 agaaaaacca aaaccaaaag aaaaaaaaaa gggcaagaaa gaactaaact cccccctccc
      241 ttgcctccag ccggcctgca cctcggtctt gcactttgca cggagggaga gggtgaggag
      301 agaaagagag agcgcgcgcg cacgcgaggg atccggagag agaaaagaaa ataataatag
      361 taaccataag agccaggcag aagaggagag aagcgtgaag tgttaaccac cccggtgtgg
      421 aggcccgcgc ctccgggaca gccacccgcc gcgccacaca accccggagc agccgccgcg
      481 cgcgccccgc ctgcagcccc gaccggctta ggcgagccct ccttatgcaa agcgcgcagc
      541 ggagcggcga gccggggacg ccgcgcaccg ggccgggctc ctccggcatc ctctctgccg
      601 ctgtcatcac caccgccacc gccagccgcg gaggaccttc ccgagcctga agcgcccggg
      661 atcggagctc agagaggcga gcaggcgagg agggggcccg gggcgagcgg gagagagaga
      721 gagagagcaa gagagaaaga gagagagcac attggcgtga gcagggggga gggagggcgg
      781 gcgcgggggg ctgcgggcag ggcggggggt gtgtgcacgc tcgagctttc gggccacagc
      841 caccgccgcg cgagctagaa gcgccctagc ccggcaagct ggctcacccg ctggccaccc
      901 agcacagccc gctggcccct ctcctgcagc ccatctggcg gagcggcggc ggcggtggcg
      961 gaggcaggag gatggcttca gaactggcaa tgaacaattc cgacctgccc accagtcccc
     1021 tggccatgga atatgttaat gacttcgatc tgatgaagtt tgaagtgaaa aaggaaccgg
     1081 tggagaccga ccgcatcatc agccagtgcg gccgtctcat cgccgggggc tcgctgtcct
     1141 ccacccccat gagcacgccc tgcagctcgg tgcccccgtc ccccagcttc tcggcgccca
     1201 gcccgggctc gggcagcgaa cagaaggcgc acctggaaga ctactactgg atgaccggct
     1261 acccgcagca gctcaacccg gaggcgctgg gcttcagccc ggaggacgca gtcgaggcgc
     1321 tcatcagcaa tagccaccag ctccagggtg gcttcgatgg ctatgcgcgg ggagcgcagc
     1381 agctggccgc ggcagcgggg gccggcgccg gcgcctccct gggcggcagc ggcgaggaga
     1441 tgggccccgc cgccgccgtg gtgtccgccg tgatcgccgc ggccgccgcg cagagcggcg
     1501 gggcacctca ctaccatcac caccaccacc acgccacggg gcaccaccac cacccgacgg
     1561 ccggcgcccc gggagccgcg ggtagcgcgt ccgcctctgc gagcggcgcg ggtggcgcgg
     1621 gcggcggtgg cccggccagc gccgggggcg gcggcggcgg cggcggcggg ggcacggcgg
     1681 gggcgggggg cgccctgcac ccgcaccatg ccgcgggagg cctgcacttc gacgaccgct
     1741 tctcggacga gcagttggtg accatgtcgg tgcgtgagct gaaccggcag ctgcgcgggg
     1801 tcagcaagga ggaggtgatc cgactgaagc agaagaggcg gaccctgaaa aaccgcggct
     1861 atgcccagtc ctgccgcttc aagagggtgc agcagagaca cgtcctggag tcggagaaga
     1921 accagctgct gcagcaggtc gaccacctca agcaggagat ctccaggctg gtgcgcgaaa
     1981 gggacgccta caaggagaaa tacgagaagt tggtgagcag cgggttccga gaaaacggct
     2041 cgagcagcga caacccttcc tctcccgaat ttttcatgta cccaagggac tcttctacat
     2101 ctgtgatgtg agaaaagcag ttgcccgaag ctgaacagaa aatatgatgc cggcatgctt
     2161 atcccgtgag agaactcggc ccacaaagca caaaaactaa actcaaactc agagaagaat
     2221 caagaagggt gtttttcctg gcgtctacaa gaagcgcttt atttttcctc tagatttctt
     2281 ttctaaaaaa taaaaaataa aaaagagaga aagaaaacag acgtaaaaac agaacagaga
     2341 tcgctgatac gaaccttcaa acaaatgaca cacacttcag gcaaccttag tcaagcatgt
     2401 tcgtttatta agtataggat gggaggaacc agggtaagct aactccagag gactgagagg
     2461 acagccacta atggaactgt tcttggaact gaggagtcaa gaatggaggg aactacctcc
     2521 ctgtttccca cctcaagcat aacccgtgta tcttaaggat gccttgcctc cttccttgcc
     2581 cgcctgtgta tctagggaat gatttgcaaa atgtaaaatg tatttgttac aattgctaaa
     2641 gaattgcttg tgtaactttg gcaaggagga cagtgaatgg tgcttctggg acccagtggc
     2701 tctgccctca ccgactctgc tcccctctga tggcaccatc gcattggttc ggttgggaca
     2761 aggtaccgag ctgctctcaa gttgccacgc ctgttcagac ctggtaggga agtatgaaac
     2821 gatggcctcc aggagtgaac tcagcatgga gacgtgaaca tgtgcatttt tcttctgtta
     2881 acaggagaaa gctggccttg ggtggcagcg gtggcagtga cggcagtgac ggcagtggtg
     2941 gcagttgggt gggtcaaggg tatattaggt tattctaagt ttgatagaga atcatgtgtg
     3001 cttccaaagc gaacctccat gctaaccatt ttcaagcaag ctaacaccag aaaagcaaac
     3061 agtcccacaa ttaaccctgt cctagaaaag ggacatcgtc ccttgaaatt ccctgcttcc
     3121 cactgattat gttttcccat tgattatggc cactcttatt tgctcgcatc accctgcact
     3181 ggaggcttca gggcacccag gatgatgggg ctgactgtga tgagggtcag agcatgggtg
     3241 gaggtttgcc cgacattatg ttgctctgat tagctggagg ggctgcccag tcgatcctgg
     3301 atgagcctct cgctgagttc ccacagggcc ctggctgtct cttcattctg agcctcttca
     3361 gatggcaggc aacggcagca gttgttgaag tacatccctc cgaggccctc cagctcggga
     3421 gcgaccgcgc agtagacagt ggtagcggct ccctgttgct gaaaagcaga gaagaaagaa
     3481 aagcaattta tttttttaat aaatgagtga caagacaatg ccattttggc tatctggaga
     3541 ttagtgagtc tttctccact tggacatcag cgtggcaaag ggctcaactc caagcccagg
     3601 actgcaaaag tatgatgtgt gacagctgtg gaaaaacaag tccataaact ctgcttgtaa
     3661 agctggtgtg actttttaca cctcatagag gaaaaggctt gggaaataaa gacacatttc
     3721 aatatatcat gccagacgcc atttcggcac agagaaaaag atgccatatt ccctaactgc
     3781 atgaacaaat ccatccagcc ctttgacttc tcaatgcgca atacaatttg acaccgagag
     3841 ctttctagaa cattctgtcc aaaagaaacc aacaactctt gattatggtc catcaagtgg
     3901 atggcccaag tgagactggt gccagatctt ttctgtgttc tttgctcagg gtgctcttag
     3961 ggggtgggat gggttaacaa cactgttgag atgtttaaaa cacacacaca cacacacaca
     4021 cacacacaca cacaccatct catatgtccc tacgctaatg tgtttattaa ttcatccaga
     4081 aaacacttct ctaaatgtca tatctgttct ggtttaatac aagatatggc ctaaggtggg
     4141 aggcatgttg ccctctagcc catttcaaaa tgcaagtctc tgtgagcagc gcatttctgg
     4201 tctcttctcg agtatcagtt gaggctatag ctaggggtgt gtctgctgat gcagtacgag
     4261 gtcatcccga ctgacagaat attgccagag atattacaaa gagggcaaga gctcactttg
     4321 ctctgcaagc cataattaaa ataatagtct tctgttcgag gggaggcaca gtgagcacag
     4381 ctctaattta aaaccagtac agtttatcag ctgtcctgtg atcattaatg gaggaggggg
     4441 gacagtaccc aatggatcaa cctgctgtcg gctgacaggg agtgtggtca caaacaagga
     4501 ccgaaaggtc accacaagat gtcaccttca gaaaaacatt agggatgttt tgcttatgag
     4561 ggagttggtt ttctgtctct attcaaatgt aatcattttg gggggggggg tacggggttt
     4621 aagttgtatc agtttagaat gtccatggaa gaacattctc ctaaatgtcg aattcgtggg
     4681 gccaggggtg ctttgagaac caggattcca tgaacttaga attttagcaa agttctaaga
     4741 agcctacttg ggttttcttt gatgcgagtc tgtcactgtg ttgggatctg tggtcataga
     4801 tgtgtcaaat gtagccacgt ggcctgactg tggaagaggt gtggaggagt gtgtaaggca
     4861 gatatgaagt tagataacac ctagccattt gagactactg gataggtccc acctgcccag
     4921 gatttaaaca tatgacttgt gattggggca taattgaaaa tccttcaaca tgtttgactc
     4981 cccctgctta tcccccccac cccaaaaaac cagagactac tttggattca ttgatttctt
     5041 tctcaattga tttccctttt gtgagctgtt actcctcatc ggctgttagc tgagcaccag
     5101 gcgtgtttat ctaaatacct gtcagacagt tatgggattc ttctgcattc tgtggaggag
     5161 gtgagcagcc agagggcctc taatagctga gaagaacata gagattatct ctcaggtaac
     5221 ccaagccata cagtagcttg tcctcagctt tctgccgagt ctaggggaag atggtgttct
     5281 ggataaacta tgggctgttt ctcttggatt ttcattttat tttgtaggtg acaaataaag
     5341 ccaagagtga tcaggtgact tgccacagac ttctatgtga tggatgagag aattcagtca
     5401 gctcctctcc aaatccactc ctcttcttcc tcttccccct ccttccccct cctcctctct
     5461 ctcctccttc ccccctcctc ctcttcctcc tccctgaaca gtagatgatt ctcatgtaag
     5521 acaatggttc taatttcaca gcaggctggc ctttcacagc cttgccaatc ctgagacgag
     5581 accaagggag gccacttggg aaagtgaaag ccagagctct cccaattcta atatggtaca
     5641 ctgccgctgt ggccttctaa acgtggtgtg gtctgtgtgc ttgcaccgtg gaaatggtgc
     5701 tcttgtgaag aaattctgca gtcaccccaa tccagaatca agctaatttg tggatcaaga
     5761 ggagatgtat tttccctcgt tgggatctgc aagcaaactg cagttgggct ggtttcgtgg
     5821 aaacagacat ttggtaacta tgcttcagcg gttttaaaag cccagcgttc cacacatgtg
     5881 cacttcaatt ctttgctatt ggtcttaggg tactttacaa cccaaattct actgccagtg
     5941 ccgagagctt tataaaagaa cacagtacag ggtacaaagg ccacctttgc taccccaaag
     6001 aacaattgtg cgctttcggc aaatcctccc tgactgcgcc atgctcgtag ccattggctc
     6061 tcgctttatc ttcttttcag acacacaatt acgtgctgac aatatcttgt tggtcccatg
     6121 cccactacct cgtgggcttt ttggagaatt ttcttttcag ctgttccaat ggcagccttt
     6181 gagtgacatc tttatgccat cggatgtggc gacagtttaa taacaagttc ccatttcggg
     6241 ctcatcggct tttcaaaatt ccacatacca tcagcccaag acaggaccac attagcgaga
     6301 tctcattagt aaacaagcct gtgccactga tagaagataa aacattttta aactgataag
     6361 aaaggttttg tgggttttgg tggttttttt ttttttttct cctgtgagca cttcaatcac
     6421 catcaaatga ctatcacgcc actttggggg gcatccataa ttcagagaag atgaaagcga
     6481 tgcaaaaaag aaacagtgtt aacaacactg atgtaatatc tgaagatatg acttgcagtt
     6541 tgtcaacatt gcttcgctga tccacggtga taaaataata acccattgac atatgaattc
     6601 tggctggagt tatggattct cccagatgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
     6661 tgtatctcct ccagaacaat ttgtcaggtt actcacagtc attcggcagc agaagctggg
     6721 gaagtggcac cttcaatcca aagcgatgcc agtgccacca ggataccgca ctgatggccc
     6781 aggactgaga gtttgtggga agcctagtag aagttttaat cataccccaa tggcatctgg
     6841 gttctagtca aacattttcg agtggccaga gttcaactgt gccatcggtt gttactatgc
     6901 ttgtaaaatt gcccagggtt cttgtttgga agattaaact cagaacattt tgctaataga
     6961 ggtttatcag actccgtagg aagctccttt tcagatatgc gatcccatcc catcttccac
     7021 cccataaacc tggaacacag acaaggggct gctgttggtt gctgggatcc tgagatttaa
     7081 aggggccatc cttccaaaat cctctggtgg gatgaagctg ttaagtagct gccttccatc
     7141 aacatttatt tgataactgc tggccaccaa tttgtagctg tcagcacaga atacaaatgg
     7201 atattgagtc cttccaagaa aaaggtacag aggtttctga taaacaaaac atgttttaaa
     7261 aaaatcaacc acatattgat atctgtgatg cattgcctcg tgctgtgata gaatgcccat
     7321 gttctgataa gaacacaggt tacataatta atttagcatt cgggcgactc cgctttaata
     7381 tgcatgctta tttaaaagga acagtagatc cctttcttaa agtaggtgta acaatgcatt
     7441 taaaaatagg cacggtatca tggcatatcc acattcaaag acttgaaaga gcagaagatg
     7501 tttgaagatt gctttattac agatgtatcc acaccaggac atcacacagc aaatgctgaa
     7561 ttaatcaatt tatgcaaaaa agaaaaaaat agattcggga aaaggaacgc accatgcaag
     7621 ctagattagg cctggagcct taagggcagg gaaggcaggc agctcttgag aagtgggctg
     7681 tgactgcaga gatggattgg aactgctgag ctgcgatgaa aaggttaggc aaagaggaaa
     7741 gacaggtgct tcttcagatc ctcagagctc ttgttgtgac tcatctgggg gctcgtaggc
     7801 atagaataca ctttccaaat gtgaaatcag tggtcccgtg gatagactat gctgagtgga
     7861 atggccaatg agtcccaaag ctgtggtagt ggcaagcatc tgactaccct tccctctctt
     7921 agtaacaacc ctgcaagaga gtttataaga cttctatcag atatacgcaa cgctgccttc
     7981 tggagttcat ctccaaaggt cttggtgctt gggacatagc tgtccccaca gtgaatcctt
     8041 tcaatctctg gattccaagg caaaaataat ctgttccaag gggtgctgtg tccctgctta
     8101 ctacccaaga acaatcttgt cagtggacga attgacctcc aaatccagaa tgttccacct
     8161 ggtcatacgg cgaagtgttt agtgcaggaa ggaggctcat acagctctct gatcagtggc
     8221 ccacaacgaa agaaggtcac catggctaat catacaacca aatgggcttt atcattaagc
     8281 agtgagggcc caccacgatc aaagagaaca aacagctctg gtctccagtg cgttccagcc
     8341 aataatgagc atcccagtag gcgcgatgac tagcattcat tgagaggtga ttttctgcca
     8401 ggtgctggca gatagcctca tcaacatcac cttccaaccc tcgagctacc ctcacaccca
     8461 cataaattca gagattgaat ggaacttgtc cgaagaccca gtgacagtca caaattgata
     8521 gatccacgag tcagggtagg aaacctcctt cccaaacaca tgacacatat tggccatctc
     8581 ctcccaggtg cctctcattt gactcaagct tccttgcact attttgtccc cagtccgtac
     8641 ctagttacag aatgatgccc tgatttggcc taaattaaat atactagctg tctgtatgtt
     8701 cacctgataa atgctcaaag gagatttttc cactgttgat ttagacagtg aactaaattg
     8761 aaattatatc catttggatt aaccaaaaaa aaaa
//
