LOCUS       XM_039097957            6399 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus MAF bZIP transcription factor (Maf),
            transcript variant X2, mRNA.
ACCESSION   XM_039097957
VERSION     XM_039097957.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039097957.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6399
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6399
                     /gene="Maf"
                     /gene_synonym="cMaf; Maf2"
                     /note="MAF bZIP transcription factor; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 28 ESTs, 11 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     144 samples with support for all annotated introns"
                     /db_xref="GeneID:54267"
                     /db_xref="RGD:3034"
ORIGIN      
        1 ttgctttaaa ctcttctcgc tggatcagag gctttaaaat cttttttcat ctcggagctg
       61 tagctcgagc tgcttgtccg ctcggcctct ccccccaccc ttttgctctc ggccttgcct
      121 tggtccagga ctttgccatt ttgctttaaa gcaaaaaaag aaagaaagaa agaaaagaaa
      181 agaaaaacca aaaccaaaag aaaaaaaaaa gggcaagaaa gaactaaact cccccctccc
      241 ttgcctccag ccggcctgca cctcggtctt gcactttgca cggagggaga gggtgaggag
      301 agaaagagag agcgcgcgcg cacgcgaggg atccggagag agaaaagaaa ataataatag
      361 taaccataag agccaggcag aagaggagag aagcgtgaag tgttaaccac cccggtgtgg
      421 aggcccgcgc ctccgggaca gccacccgcc gcgccacaca accccggagc agccgccgcg
      481 cgcgccccgc ctgcagcccc gaccggctta ggcgagccct ccttatgcaa agcgcgcagc
      541 ggagcggcga gccggggacg ccgcgcaccg ggccgggctc ctccggcatc ctctctgccg
      601 ctgtcatcac caccgccacc gccagccgcg gaggaccttc ccgagcctga agcgcccggg
      661 atcggagctc agagaggcga gcaggcgagg agggggcccg gggcgagcgg gagagagaga
      721 gagagagcaa gagagaaaga gagagagcac attggcgtga gcagggggga gggagggcgg
      781 gcgcgggggg ctgcgggcag ggcggggggt gtgtgcacgc tcgagctttc gggccacagc
      841 caccgccgcg cgagctagaa gcgccctagc ccggcaagct ggctcacccg ctggccaccc
      901 agcacagccc gctggcccct ctcctgcagc ccatctggcg gagcggcggc ggcggtggcg
      961 gaggcaggag gatggcttca gaactggcaa tgaacaattc cgacctgccc accagtcccc
     1021 tggccatgga atatgttaat gacttcgatc tgatgaagtt tgaagtgaaa aaggaaccgg
     1081 tggagaccga ccgcatcatc agccagtgcg gccgtctcat cgccgggggc tcgctgtcct
     1141 ccacccccat gagcacgccc tgcagctcgg tgcccccgtc ccccagcttc tcggcgccca
     1201 gcccgggctc gggcagcgaa cagaaggcgc acctggaaga ctactactgg atgaccggct
     1261 acccgcagca gctcaacccg gaggcgctgg gcttcagccc ggaggacgca gtcgaggcgc
     1321 tcatcagcaa tagccaccag ctccagggtg gcttcgatgg ctatgcgcgg ggagcgcagc
     1381 agctggccgc ggcagcgggg gccggcgccg gcgcctccct gggcggcagc ggcgaggaga
     1441 tgggccccgc cgccgccgtg gtgtccgccg tgatcgccgc ggccgccgcg cagagcggcg
     1501 gggcacctca ctaccatcac caccaccacc acgccacggg gcaccaccac cacccgacgg
     1561 ccggcgcccc gggagccgcg ggtagcgcgt ccgcctctgc gagcggcgcg ggtggcgcgg
     1621 gcggcggtgg cccggccagc gccgggggcg gcggcggcgg cggcggcggg ggcacggcgg
     1681 gggcgggggg cgccctgcac ccgcaccatg ccgcgggagg cctgcacttc gacgaccgct
     1741 tctcggacga gcagttggtg accatgtcgg tgcgtgagct gaaccggcag ctgcgcgggg
     1801 tcagcaagga ggaggtgatc cgactgaagc agaagaggcg gaccctgaaa aaccgcggct
     1861 atgcccagtc ctgccgcttc aagagggtgc agcagagaca cgtcctggag tcggagaaga
     1921 accagctgct gcagcaggtc gaccacctca agcaggagat ctccaggctg gtgcgcgaaa
     1981 gggacgccta caaggagaaa tacgagaagt tggtgagcag cgggttccga gaaaacggct
     2041 cgagcagcga caacccttcc tctcccgaat ttttcatgta cccaagggac tcttctacat
     2101 ctgtgatgtg agaaaagcag ttgcccgaag ctgaacagag aagagagtcc gcttactcgc
     2161 tccttgttgc gtgcacacaa gcaaggtttt attttctgaa attggaaact attttttaca
     2221 aaggtacctt ggacaaactt gcacccagga tgtcagtgca tgtgaccaac atcttggata
     2281 ctggagcacc tatgagtagg ggtttttctg aagcacaccc ttgtcaaaga agaagaaact
     2341 gtacagaatg gggccctcaa agagtaccct ggcatgcgtg gagacggacc gtcatgctct
     2401 aggacattgt tccctcgagc agacactgta ggatacaact taagacattt ctctttgaac
     2461 cgctttagct acagagatta tgagactttt taaaaatata tacttcaagg acgattggta
     2521 tttaacgttt gttatggcca cacggaggcc ataccgtgtt ggttggagtt agaattgaca
     2581 tccatgcact cggacctccc actcagacat ttacagagtt gatgggtgtg atgggaagtt
     2641 acagaggagc aaggagtctc ccaggagaca gaacctgtca tcttcagtcc ttgaaacaag
     2701 tctaggggta gatactttaa tccactttaa caatgtggag ggtactgggc acaaaggaat
     2761 ttaggtgccc tgtaaccctt cactaccatc ttgcttagct acctaccacg ccacttcctc
     2821 cctgtcagtc agtctgtctg cagccttcct gggtcacaca ctttagcttt tagcctcaat
     2881 ttgtactgta agtgtccaag tgccctcccc ttggcctcct ttcctgagca gggatgagtg
     2941 tggctcagaa gaaaggacac ataatgtgat tagtatctgg aggtctagag ccatggcttc
     3001 tcgtggtctt gaccccccaa ggacccctgt gagtctctga acaaacgatc ctgtactgtt
     3061 gatttcggaa ggcgacggga aaggagttcc agtcgaaaga taatgattgc catccccagc
     3121 cgcagtttaa cagtaattga tgacacttct cctcaaaaac tccataatgt gtgaagagtc
     3181 actcagcacg ttgctggata gtggagatcc acatcgctgt tggtaaatct ctccaacgga
     3241 agccctgttg aataaaagtt gtccgcgaaa tcagcaccgc tactacaaaa aaatacaatt
     3301 tccacatctc gaggatggga actgtccctc caaggggaac agaaaggatt aaatatggta
     3361 atatatgtaa agcacttgga ttaaatatgt taatatatgt aaaacacctg ccctgggtaa
     3421 acaccctccc tgccatgttc agccatggac agtgttacag gggataaaat tctgaccttg
     3481 acacttaaca agccttggtt tacattagaa taacgttgtg attacagtat tgagcttccc
     3541 ccaccccacc acaccccacc cccagcccac cgttttaaaa taaacgtttt caaaaatcag
     3601 aaaaccgagg ttggtaacgc ttatggccat tcctttattt aaaaaaaaaa aaatctcatc
     3661 acccctaaaa ataaaataaa ataaaatcat cgtactttga ggagctctct gctcaaatag
     3721 tttagggaaa cgtgtgtatt aaattaaaca tttaatattg ctgtcatcca tctcagagcc
     3781 tttatatgct aatacgtatg ccctgtatac atattatact aacgcagatg gcagtcagta
     3841 ttttctaagc ttgtgtgaac acggactgtg attgttttta aacacccagt ttcctgtaac
     3901 tagtattgtt ctaggcaatt ttgagagaga gagagagaga gagagagaga gagagagaga
     3961 gagagagaga gaaatatggt tgcctgaagg tatattaaag cactggcatt tctttctttt
     4021 tgaaccaaag agccctttta ttaattttcc ctggtggaaa tcttgtcctc aatgactcct
     4081 tttgcattct tcctgttcgt ttcccttatc agcccagaag gactgtatag gattctgtct
     4141 gtgatgtgta cttcaggaga gagaactatg aggtggaggc aaattctaca gggccggtat
     4201 aagaatgagc tcccggagtt gcccagcctt cctgagctcc acaggagatc tcaggagttc
     4261 agctggggac ccagaggcat tgtttaacat gccttagcct ttttcgacta gatgggccat
     4321 tcaaagggtc aaagcttctg caaggaatac tcaatttcct agggttcaga ccagggagtc
     4381 tgcagctcta aaagcaacct tcagtttggg gttccttttt aaaaggagga gaatccaaga
     4441 tggcttgggt gagaaccgag tatacaagtt catcctctcg gaccctcttt ctagtgcctc
     4501 tgccttgggg tacatgtaga acccaccttc actcccaagt cccaccccaa acatgtcctt
     4561 tgatcttaag gctccatcag aggttatctg gacattctgg gttccccaac tcagaagaga
     4621 actgattggc tcacccaata tccactgagc aggagctagg ggagggtcct tgggtcagtt
     4681 tcttgcttag tcctattttc tgagacaagg gttggatgaa actaccacag tggtctggca
     4741 ccaatgtatg agatgaaaat tagtgctcaa gactcatggt ttggaggcag ggatgtgagg
     4801 ggttgggcac aagcacatct ctgaacctag aagatgggtt gtctgtctat cctggctaga
     4861 tagttcttcc caaatcatta atgccctacc tcaagtcaat taaatcagta cctcaagggg
     4921 gtgggtgagc tcacacacca gtgtttttat tttaaacaat cccaagacat tccagtgtgt
     4981 aaggaggaat gaggagttct ggagaagaat gcagggggca ccagcctcta tagaaaaccc
     5041 agagagccaa ggagcccctg gcagagctcc cacattcttg tccttctgat aattcagcgt
     5101 ctctcaggtc cagtctcaga tgagaagggc agaacaatcg ctttgtgttt cccactccat
     5161 ctggcctcct cagtccttta gaaacatcaa ctctattcat gatgagcaag gccaatgcag
     5221 tcagagaagg tccctgggga aaggagacca gagctctgaa gcctccaatt taaacctgac
     5281 ttggccacaa catagctcca ggatgtgggt gggtcccgtt cccctaactg ccttgcagga
     5341 tcacatgtca caaacttctt tttttttctt taagaggggg atgagggggt gtaattgacc
     5401 tagaagtcaa ggagggttct acaatcagct gtgcacctag catttcacag acttatgggt
     5461 gaaccagagg agatacggat ttgagctggt ggaatggtaa atttttacac tacggtgcct
     5521 ttaaaaatta atccacacgg aaaagaaaat aattattcag tgatcaaatt acaaagatag
     5581 atgcatcctc aaattatttg cacagacttt tgcagacacc aatgatttta cacacacaca
     5641 cacacacaca cacacacaca cacacacctg tgttgaagac tctaccttgt aagaagatgg
     5701 ccttgcgagc ttcacctcct ctcttggatg ctgagaccat gtgacagtgg cgtccatgcc
     5761 ttaagtgttc ttgtgtttga ccctgagctg tctgatggtg agtggctcac catgggctca
     5821 gtgcttttca agcaaagcac aggtctccct gaataagtag ttgactagcc aaacatgtac
     5881 tccaatgtgt gataacagcc ttagaatgct gtgaaacatc caagaaagac atctttacag
     5941 tctgctaaaa cttaaaaatt atttcaactc tcttctagct tttcaactag aaaagttgtc
     6001 cccctgacaa ctgctgtgtc ttttatgggt gaagttttct tacttggata acaaattaaa
     6061 tgtcacctga acattgtgtt ttatttcatt tatttttatt ttattttatt ttatttagct
     6121 agttagcctg ggctcttcct ctccagaact gaggtacaag tctataccat tatacctgtt
     6181 ttctaggggg tttgtttgat tttgcttttg ttttccttgt attttaggga ttgaacttgg
     6241 gtctccatgc tcaaggcaag cattacaggc tgggccttga gccacagttc taccaggtga
     6301 tttatgtttt agatctattg acactttttt tcattctgac tattttgcca ttaaacacac
     6361 aaacacacac acacacacac acacacacac acacacact
//
