LOCUS       XM_039097956            6338 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus MAF bZIP transcription factor (Maf),
            transcript variant X1, mRNA.
ACCESSION   XM_039097956
VERSION     XM_039097956.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039097956.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6338
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6338
                     /gene="Maf"
                     /gene_synonym="cMaf; Maf2"
                     /note="MAF bZIP transcription factor; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 28 ESTs, 11 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     57 samples with support for all annotated introns"
                     /db_xref="GeneID:54267"
                     /db_xref="RGD:3034"
ORIGIN      
        1 ttgctttaaa ctcttctcgc tggatcagag gctttaaaat cttttttcat ctcggagctg
       61 tagctcgagc tgcttgtccg ctcggcctct ccccccaccc ttttgctctc ggccttgcct
      121 tggtccagga ctttgccatt ttgctttaaa gcaaaaaaag aaagaaagaa agaaaagaaa
      181 agaaaaacca aaaccaaaag aaaaaaaaaa gggcaagaaa gaactaaact cccccctccc
      241 ttgcctccag ccggcctgca cctcggtctt gcactttgca cggagggaga gggtgaggag
      301 agaaagagag agcgcgcgcg cacgcgaggg atccggagag agaaaagaaa ataataatag
      361 taaccataag agccaggcag aagaggagag aagcgtgaag tgttaaccac cccggtgtgg
      421 aggcccgcgc ctccgggaca gccacccgcc gcgccacaca accccggagc agccgccgcg
      481 cgcgccccgc ctgcagcccc gaccggctta ggcgagccct ccttatgcaa agcgcgcagc
      541 ggagcggcga gccggggacg ccgcgcaccg ggccgggctc ctccggcatc ctctctgccg
      601 ctgtcatcac caccgccacc gccagccgcg gaggaccttc ccgagcctga agcgcccggg
      661 atcggagctc agagaggcga gcaggcgagg agggggcccg gggcgagcgg gagagagaga
      721 gagagagcaa gagagaaaga gagagagcac attggcgtga gcagggggga gggagggcgg
      781 gcgcgggggg ctgcgggcag ggcggggggt gtgtgcacgc tcgagctttc gggccacagc
      841 caccgccgcg cgagctagaa gcgccctagc ccggcaagct ggctcacccg ctggccaccc
      901 agcacagccc gctggcccct ctcctgcagc ccatctggcg gagcggcggc ggcggtggcg
      961 gaggcaggag gatggcttca gaactggcaa tgaacaattc cgacctgccc accagtcccc
     1021 tggccatgga atatgttaat gacttcgatc tgatgaagtt tgaagtgaaa aaggaaccgg
     1081 tggagaccga ccgcatcatc agccagtgcg gccgtctcat cgccgggggc tcgctgtcct
     1141 ccacccccat gagcacgccc tgcagctcgg tgcccccgtc ccccagcttc tcggcgccca
     1201 gcccgggctc gggcagcgaa cagaaggcgc acctggaaga ctactactgg atgaccggct
     1261 acccgcagca gctcaacccg gaggcgctgg gcttcagccc ggaggacgca gtcgaggcgc
     1321 tcatcagcaa tagccaccag ctccagggtg gcttcgatgg ctatgcgcgg ggagcgcagc
     1381 agctggccgc ggcagcgggg gccggcgccg gcgcctccct gggcggcagc ggcgaggaga
     1441 tgggccccgc cgccgccgtg gtgtccgccg tgatcgccgc ggccgccgcg cagagcggcg
     1501 gggcacctca ctaccatcac caccaccacc acgccacggg gcaccaccac cacccgacgg
     1561 ccggcgcccc gggagccgcg ggtagcgcgt ccgcctctgc gagcggcgcg ggtggcgcgg
     1621 gcggcggtgg cccggccagc gccgggggcg gcggcggcgg cggcggcggg ggcacggcgg
     1681 gggcgggggg cgccctgcac ccgcaccatg ccgcgggagg cctgcacttc gacgaccgct
     1741 tctcggacga gcagttggtg accatgtcgg tgcgtgagct gaaccggcag ctgcgcgggg
     1801 tcagcaagga ggaggtgatc cgactgaagc agaagaggcg gaccctgaaa aaccgcggct
     1861 atgcccagtc ctgccgcttc aagagggtgc agcagagaca cgtcctggag tcggagaaga
     1921 accagctgct gcagcaggtc gaccacctca agcaggagat ctccaggctg gtgcgcgaaa
     1981 gggacgccta caaggagaaa tacgagaagt tggtgagcag cgggttccga gaaaacggct
     2041 cgagcagcga caacccttcc tctcccgaat ttttcataga agagagtccg cttactcgct
     2101 ccttgttgcg tgcacacaag caaggtttta ttttctgaaa ttggaaacta ttttttacaa
     2161 aggtaccttg gacaaacttg cacccaggat gtcagtgcat gtgaccaaca tcttggatac
     2221 tggagcacct atgagtaggg gtttttctga agcacaccct tgtcaaagaa gaagaaactg
     2281 tacagaatgg ggccctcaaa gagtaccctg gcatgcgtgg agacggaccg tcatgctcta
     2341 ggacattgtt ccctcgagca gacactgtag gatacaactt aagacatttc tctttgaacc
     2401 gctttagcta cagagattat gagacttttt aaaaatatat acttcaagga cgattggtat
     2461 ttaacgtttg ttatggccac acggaggcca taccgtgttg gttggagtta gaattgacat
     2521 ccatgcactc ggacctccca ctcagacatt tacagagttg atgggtgtga tgggaagtta
     2581 cagaggagca aggagtctcc caggagacag aacctgtcat cttcagtcct tgaaacaagt
     2641 ctaggggtag atactttaat ccactttaac aatgtggagg gtactgggca caaaggaatt
     2701 taggtgccct gtaacccttc actaccatct tgcttagcta cctaccacgc cacttcctcc
     2761 ctgtcagtca gtctgtctgc agccttcctg ggtcacacac tttagctttt agcctcaatt
     2821 tgtactgtaa gtgtccaagt gccctcccct tggcctcctt tcctgagcag ggatgagtgt
     2881 ggctcagaag aaaggacaca taatgtgatt agtatctgga ggtctagagc catggcttct
     2941 cgtggtcttg accccccaag gacccctgtg agtctctgaa caaacgatcc tgtactgttg
     3001 atttcggaag gcgacgggaa aggagttcca gtcgaaagat aatgattgcc atccccagcc
     3061 gcagtttaac agtaattgat gacacttctc ctcaaaaact ccataatgtg tgaagagtca
     3121 ctcagcacgt tgctggatag tggagatcca catcgctgtt ggtaaatctc tccaacggaa
     3181 gccctgttga ataaaagttg tccgcgaaat cagcaccgct actacaaaaa aatacaattt
     3241 ccacatctcg aggatgggaa ctgtccctcc aaggggaaca gaaaggatta aatatggtaa
     3301 tatatgtaaa gcacttggat taaatatgtt aatatatgta aaacacctgc cctgggtaaa
     3361 caccctccct gccatgttca gccatggaca gtgttacagg ggataaaatt ctgaccttga
     3421 cacttaacaa gccttggttt acattagaat aacgttgtga ttacagtatt gagcttcccc
     3481 caccccacca caccccaccc ccagcccacc gttttaaaat aaacgttttc aaaaatcaga
     3541 aaaccgaggt tggtaacgct tatggccatt cctttattta aaaaaaaaaa aatctcatca
     3601 cccctaaaaa taaaataaaa taaaatcatc gtactttgag gagctctctg ctcaaatagt
     3661 ttagggaaac gtgtgtatta aattaaacat ttaatattgc tgtcatccat ctcagagcct
     3721 ttatatgcta atacgtatgc cctgtataca tattatacta acgcagatgg cagtcagtat
     3781 tttctaagct tgtgtgaaca cggactgtga ttgtttttaa acacccagtt tcctgtaact
     3841 agtattgttc taggcaattt tgagagagag agagagagag agagagagag agagagagag
     3901 agagagagag aaatatggtt gcctgaaggt atattaaagc actggcattt ctttcttttt
     3961 gaaccaaaga gcccttttat taattttccc tggtggaaat cttgtcctca atgactcctt
     4021 ttgcattctt cctgttcgtt tcccttatca gcccagaagg actgtatagg attctgtctg
     4081 tgatgtgtac ttcaggagag agaactatga ggtggaggca aattctacag ggccggtata
     4141 agaatgagct cccggagttg cccagccttc ctgagctcca caggagatct caggagttca
     4201 gctggggacc cagaggcatt gtttaacatg ccttagcctt tttcgactag atgggccatt
     4261 caaagggtca aagcttctgc aaggaatact caatttccta gggttcagac cagggagtct
     4321 gcagctctaa aagcaacctt cagtttgggg ttccttttta aaaggaggag aatccaagat
     4381 ggcttgggtg agaaccgagt atacaagttc atcctctcgg accctctttc tagtgcctct
     4441 gccttggggt acatgtagaa cccaccttca ctcccaagtc ccaccccaaa catgtccttt
     4501 gatcttaagg ctccatcaga ggttatctgg acattctggg ttccccaact cagaagagaa
     4561 ctgattggct cacccaatat ccactgagca ggagctaggg gagggtcctt gggtcagttt
     4621 cttgcttagt cctattttct gagacaaggg ttggatgaaa ctaccacagt ggtctggcac
     4681 caatgtatga gatgaaaatt agtgctcaag actcatggtt tggaggcagg gatgtgaggg
     4741 gttgggcaca agcacatctc tgaacctaga agatgggttg tctgtctatc ctggctagat
     4801 agttcttccc aaatcattaa tgccctacct caagtcaatt aaatcagtac ctcaaggggg
     4861 tgggtgagct cacacaccag tgtttttatt ttaaacaatc ccaagacatt ccagtgtgta
     4921 aggaggaatg aggagttctg gagaagaatg cagggggcac cagcctctat agaaaaccca
     4981 gagagccaag gagcccctgg cagagctccc acattcttgt ccttctgata attcagcgtc
     5041 tctcaggtcc agtctcagat gagaagggca gaacaatcgc tttgtgtttc ccactccatc
     5101 tggcctcctc agtcctttag aaacatcaac tctattcatg atgagcaagg ccaatgcagt
     5161 cagagaaggt ccctggggaa aggagaccag agctctgaag cctccaattt aaacctgact
     5221 tggccacaac atagctccag gatgtgggtg ggtcccgttc ccctaactgc cttgcaggat
     5281 cacatgtcac aaacttcttt ttttttcttt aagaggggga tgagggggtg taattgacct
     5341 agaagtcaag gagggttcta caatcagctg tgcacctagc atttcacaga cttatgggtg
     5401 aaccagagga gatacggatt tgagctggtg gaatggtaaa tttttacact acggtgcctt
     5461 taaaaattaa tccacacgga aaagaaaata attattcagt gatcaaatta caaagataga
     5521 tgcatcctca aattatttgc acagactttt gcagacacca atgattttac acacacacac
     5581 acacacacac acacacacac acacacctgt gttgaagact ctaccttgta agaagatggc
     5641 cttgcgagct tcacctcctc tcttggatgc tgagaccatg tgacagtggc gtccatgcct
     5701 taagtgttct tgtgtttgac cctgagctgt ctgatggtga gtggctcacc atgggctcag
     5761 tgcttttcaa gcaaagcaca ggtctccctg aataagtagt tgactagcca aacatgtact
     5821 ccaatgtgtg ataacagcct tagaatgctg tgaaacatcc aagaaagaca tctttacagt
     5881 ctgctaaaac ttaaaaatta tttcaactct cttctagctt ttcaactaga aaagttgtcc
     5941 ccctgacaac tgctgtgtct tttatgggtg aagttttctt acttggataa caaattaaat
     6001 gtcacctgaa cattgtgttt tatttcattt atttttattt tattttattt tatttagcta
     6061 gttagcctgg gctcttcctc tccagaactg aggtacaagt ctataccatt atacctgttt
     6121 tctagggggt ttgtttgatt ttgcttttgt tttccttgta ttttagggat tgaacttggg
     6181 tctccatgct caaggcaagc attacaggct gggccttgag ccacagttct accaggtgat
     6241 ttatgtttta gatctattga cacttttttt cattctgact attttgccat taaacacaca
     6301 aacacacaca cacacacaca cacacacaca cacacact
//
