LOCUS       NM_001025699            3432 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus macoilin 1 (Maco1), mRNA.
ACCESSION   NM_001025699 XM_233555
VERSION     NM_001025699.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3432)
  AUTHORS   Miyara,A., Ohta,A., Okochi,Y., Tsukada,Y., Kuhara,A. and Mori,I.
  TITLE     Novel and conserved protein macoilin is required for diverse
            neuronal functions in Caenorhabditis elegans
  JOURNAL   PLoS Genet 7 (5), e1001384 (2011)
   PUBMED   21589894
REFERENCE   2  (bases 1 to 3432)
  AUTHORS   Kuvbachieva,A., Bestel,A.M., Tissir,F., Maloum,I., Guimiot,F.,
            Ramoz,N., Bourgeois,F., Moalic,J.M., Goffinet,A.M. and Simonneau,M.
  TITLE     Identification of a novel brain-specific and Reelin-regulated gene
            that encodes a protein colocalized with synapsin
  JOURNAL   Eur J Neurosci 20 (3), 603-610 (2004)
   PUBMED   15255972
REFERENCE   3  (bases 1 to 3432)
  AUTHORS   Kumada,M., Iwamoto,S., Kamesaki,T., Okuda,H. and Kajii,E.
  TITLE     Entire sequence of a mouse chromosomal segment containing the gene
            Rhced and a comparative analysis of the homologous human sequence
  JOURNAL   Gene 299 (1-2), 165-172 (2002)
   PUBMED   12459264
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AY845021.1.
            
            On Jan 8, 2006 this sequence version replaced NM_001025699.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY845021.1, BC097999.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3432
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..3432
                     /gene="Maco1"
                     /gene_synonym="Tmem57"
                     /note="macoilin 1"
                     /db_xref="GeneID:313618"
                     /db_xref="RGD:1561685"
     exon            1..261
                     /gene="Maco1"
                     /gene_synonym="Tmem57"
                     /inference="alignment:Splign:2.1.0"
     CDS             182..2176
                     /gene="Maco1"
                     /gene_synonym="Tmem57"
                     /note="transmembrane protein 57"
                     /codon_start=1
                     /product="macoilin"
                     /protein_id="NP_001020870.2"
                     /db_xref="GeneID:313618"
                     /db_xref="RGD:1561685"
                     /translation="MKRRNADCSKLRRPLKRNRITEGIYGSTFLYLKFLVVWALVLLA
                     DFVLEFRFEYLWPFWLFIRSVYDSFRYQGLAFSVFFVCVAFTSNIICLLFIPIQWLFF
                     AASTYVWVQYVWHTERGVCLPTVSLWILFVYIEAAIRFKDLKNFHVDLCRPFAAHCIG
                     YPVVTLGFGFKSYVSYKMRLRKQKEVQKENEFYMQLLQQALPPEQQMLQKQEKEAEEA
                     AKGLPDMDSSILIHHNGGIPANKKLSTALPEIEYREKGKEKDKDAKKHNLGINNNNIL
                     QPVDSKIQEIEYMENHINSKRLNNVLVGSTENLLKEDSCTASSKNYKNASGVVNSSPR
                     SHSATNGSIPSSSSKNEKKQRCTSKGPSAHKDLMENCIPNNQLSKPDALVRLEQDIKK
                     LKADLQASRQVEQELRSQISSLSSTERGIRSEMGQLRQENELLQNKLHNAVQMKQKDK
                     QNISQLEKRLKAEQEARGFVEKQLMEEKKRKKLEEATAARAVAFAAASRGECTETLRS
                     RIRELEAEGKKLTMDLKVKEEQIRELELKVQELRKYKENEKDTEVLMSALSAMQDKTQ
                     HLENSLSAETRIKLDLFSALGDAKRQLEIAQGQILQKDQEIKDLKQKIAEVMAVMPSI
                     TYSAATSPLSPVSPHYSSKFVETSPSGLDPNASVYQPLKK"
     exon            262..403
                     /gene="Maco1"
                     /gene_synonym="Tmem57"
                     /inference="alignment:Splign:2.1.0"
     exon            404..530
                     /gene="Maco1"
                     /gene_synonym="Tmem57"
                     /inference="alignment:Splign:2.1.0"
     exon            531..654
                     /gene="Maco1"
                     /gene_synonym="Tmem57"
                     /inference="alignment:Splign:2.1.0"
     exon            655..833
                     /gene="Maco1"
                     /gene_synonym="Tmem57"
                     /inference="alignment:Splign:2.1.0"
     exon            834..1335
                     /gene="Maco1"
                     /gene_synonym="Tmem57"
                     /inference="alignment:Splign:2.1.0"
     exon            1336..1494
                     /gene="Maco1"
                     /gene_synonym="Tmem57"
                     /inference="alignment:Splign:2.1.0"
     exon            1495..1677
                     /gene="Maco1"
                     /gene_synonym="Tmem57"
                     /inference="alignment:Splign:2.1.0"
     exon            1678..1798
                     /gene="Maco1"
                     /gene_synonym="Tmem57"
                     /inference="alignment:Splign:2.1.0"
     exon            1799..1973
                     /gene="Maco1"
                     /gene_synonym="Tmem57"
                     /inference="alignment:Splign:2.1.0"
     exon            1974..3415
                     /gene="Maco1"
                     /gene_synonym="Tmem57"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcggaggagg ctcggcgccc ccctcctggc ccccctcccc cccccccccc ggtgctggct
       61 ccatgtctgt gtgaccggcc gcaggggtag attccaggcc cgacgcgggg cgggcgggcg
      121 gcggcggctg aggtgagagg cggcggcggc gcggctcggg caccggcccc ccagtgggag
      181 gatgaagcgg cggaacgccg actgcagtaa gctccgccgc cccctgaagc ggaaccggat
      241 caccgagggt atctacggca gtaccttttt atacctgaaa ttcctggtag tgtgggcact
      301 tgtcctcctg gccgactttg tcctggagtt ccgatttgaa tacctgtggc cattttggct
      361 tttcatcaga agcgtctatg attccttcag ataccaggga ctggccttct cagtattttt
      421 tgtttgtgta gcattcactt caaatatcat atgtctcctc ttcattccca tacaatggct
      481 tttttttgct gctagcacat atgtatgggt ccagtacgta tggcacacag aacggggagt
      541 gtgtttgcct acagtgtccc tctggatact ctttgtttat attgaagccg caattagatt
      601 taaagatctg aaaaattttc atgtagacct ttgtcggcca tttgctgctc actgtattgg
      661 gtaccctgtg gtgactttgg gctttggctt caaaagttat gtgagctaca aaatgcggtt
      721 aagaaagcag aaggaggttc agaaggagaa cgagttttac atgcagcttc ttcagcaggc
      781 cctccctcca gagcagcaga tgttgcagaa gcaggagaag gaggccgagg aagcagccaa
      841 aggattgccg gacatggact cctcgatcct tatacaccac aacggaggca tcccagccaa
      901 caaaaaactt tccacagcgt tgccagagat agaatatcga gaaaagggga aagagaagga
      961 caaggatgcc aagaaacaca acctcggaat aaataacaac aacattctac agcctgtaga
     1021 ctctaagata caagagattg agtatatgga aaaccatatc aatagtaaaa gattaaacaa
     1081 tgttcttgtg ggaagtacag aaaatctctt aaaagaggac tcatgcactg cttcctcaaa
     1141 aaattacaaa aatgccagtg gagttgtgaa ctcctcgcct cgaagtcaca gcgctacaaa
     1201 tggaagcatt ccttcctcgt ccagtaaaaa cgagaagaag cagaggtgca ccagcaaggg
     1261 cccgagtgca cacaaggact taatggagaa ctgtattcct aacaaccagc tcagcaaacc
     1321 cgacgctctg gtaaggctgg aacaagatat taaaaagcta aaggctgacc tgcaagccag
     1381 ccggcaagtg gagcaagagc tgcgcagtca gatcagctcc ctctcaagca cagagcgagg
     1441 gatccgctca gaaatgggcc agctccggca ggagaacgag ctgctgcaga acaagctaca
     1501 caatgctgtg caaatgaagc aaaaagacaa acagaacatc agccagctgg agaagaggct
     1561 gaaagctgag caggaggccc gaggctttgt agaaaagcag ctcatggagg agaaaaaaag
     1621 gaagaagcta gaagaagcca cggctgcacg ggctgttgcc tttgctgctg catctagggg
     1681 agagtgcacc gaaaccttac ggagtcggat cagagagcta gaagctgagg gcaagaagct
     1741 cacaatggac ctgaaggtga aggaggagca gatcagggaa ctggagctga aggtgcagga
     1801 gcttcggaag tacaaagaaa acgagaagga cactgaggtg ttgatgtcag ccctctctgc
     1861 catgcaagac aaaacgcaac acctagagaa cagcctcagt gcagagacga ggatcaagct
     1921 ggacctgttc tctgcactcg gtgatgcaaa gcggcagctc gagattgccc aggggcaaat
     1981 ccttcagaaa gaccaggaaa tcaaggacct aaaacagaag atagctgaag tcatggccgt
     2041 catgcccagc ataacataca gtgccgccac cagtcccctg agccctgtgt ccccccacta
     2101 ctcttccaag tttgtggaga ccagcccctc tggacttgat cctaatgcct ctgtctatca
     2161 gcccctgaag aaatgaaggc caactgtgtg tttgcccaac atttggaacc agaaggcttc
     2221 gaaaagcagc gtctctggca gtcaagataa aaaagttgat attgtgtttt gtgggactgt
     2281 atatgttgtc atttttaaag gggggaaata acatccaagt ctgattagaa ccgcccatca
     2341 gttgttcttg gaagttttta gaagacctca caggactttg cagtttattt ttcttggcca
     2401 acacattaaa accattcttg gatttcaagt agccaatttt gcctttttat gtatttttac
     2461 atagtttcct cttgaagaaa aaaaaagcag agtttttttt gcttttcaac cctattttgt
     2521 tcttaaataa gcaagaaaat tgcacgttgt attcacggac gacaacaaag gcgtagtttc
     2581 tagtgcgaga gggcggagta gcccagcagc tctggttcca tagctgcatt aaagatgatt
     2641 gtctccatta cagaaaaaag agcgattgcc cctccaagaa ccagacagat tgagagaatg
     2701 tcacttaagc tgagagagac ttaagggtga ggctggcttg caggcgtgtg gccgtgtgtt
     2761 tggagtattg acattcccat tgctgttagc tccagagcac acccagggca gtctttgcat
     2821 taccgtgaga aaagatgttg caagaggaag cttgatcatt gtcaactctg tcccctcccc
     2881 cctgtcatct gtcttctatt tgtcccggtc actgctgagc ctttgctcag ctggttggtg
     2941 gctcggctgc tggtcaccac gccaccactt gggttttcca tgggaagcac acagggttct
     3001 gcgcttgccg ccagtcaggc accttaggtg gcagcctggt gggtgtgaga gaggccaaac
     3061 gatggctgat ggaagccgtg gtctaggagt ggcccccacg tgccatttgc tgctttcttc
     3121 gccctcctca tctcgtgtcc gatggtttac agatgcctga cagttcctca gctcttgtgc
     3181 caaggaggag tggttgttgg ttttttttgt ttgtttgttt gtttgttttg aagatttaaa
     3241 ctctgcgcaa agataccggt tcaactgtat tatacgttgg tagaaagtgt ctgcacagac
     3301 ctttgaaagt gtgttaagaa tcagggagtg ggagggcagg ggagaggagg ggcaaagcag
     3361 agttgctgtt ttgaaagctg gggatattaa accaaatcga ttggcttggc ttccaaaaaa
     3421 aaaaaaaaaa aa
//
