LOCUS       NM_001393908            2022 bp    mRNA    linear   ROD 22-SEP-2024
DEFINITION  Rattus norvegicus mitochondrial nucleoid associated protein 1
            (Mtnap1), mRNA.
ACCESSION   NM_001393908 XM_006247676
VERSION     NM_001393908.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2022)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 2022)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Mar 22, 2021 this sequence version replaced XM_006247676.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC088445.1, SRR26643297.36703.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-290               JAXUCZ010000010.1  99227806-99228095
            291-1675            JAXUCZ010000010.1  99230835-99232219
            1676-1780           JAXUCZ010000010.1  99235148-99235252
            1781-1888           JAXUCZ010000010.1  99235834-99235941
            1889-2022           JAXUCZ010000010.1  99237705-99237838
FEATURES             Location/Qualifiers
     source          1..2022
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q32.1"
     gene            1..2022
                     /gene="Mtnap1"
                     /note="mitochondrial nucleoid associated protein 1"
                     /db_xref="GeneID:287798"
                     /db_xref="RGD:1359207"
     exon            1..290
                     /gene="Mtnap1"
                     /inference="alignment:Splign:2.1.0"
     exon            291..1675
                     /gene="Mtnap1"
                     /inference="alignment:Splign:2.1.0"
     CDS             319..1911
                     /gene="Mtnap1"
                     /codon_start=1
                     /product="uncharacterized protein C17orf80 homolog"
                     /protein_id="NP_001380837.1"
                     /db_xref="GeneID:287798"
                     /db_xref="RGD:1359207"
                     /translation="MEVCPYCKKPFKRLKSHLPHCKMTGSSIPADQKVSQSKTATLTK
                     KEKRPTRDLTRAEEKELEREGPKRTVKVETSQAEWTTAASPLPEGASEGTHTTKAGET
                     KEKKLLSFRVLRRTKPEVTLQRVTAPQSPPKIESTRDVSESKGSPRCPSETEASSLVS
                     SREPFSTKQDREHVSAQPHAKPATSARLRLDTADPQRQKLLVKLLDVPTGDCRSPKNG
                     SHGVQRVAPSVSSREKDSQDGGHLSGVSPHSGDPETQRSESLLLGLHNGLLGKAQVRE
                     HQELGLGMELSQSKGNTENRMSVTDGQEATGLGHRGKDPIAATKAKPKATLEFRNVFM
                     PPQGALSQPLSVPGSESQSLPSLAVTSTPEEKGQFCGQSQVPAMTLRHHLASHSAQCH
                     IPENFPTTSEAPPRSVGLEWFPELYPGYVGLGVLPRRPQPWNWAAQMPPLATFQGRSV
                     SKVPWWERSSADSRSLEPLALTTSSLPLMRLLGAVHKGWVLCNTTIKRSGVGRLSMLF
                     AGYFVLCCSWSFKHLKLQRWRK"
     exon            1676..1780
                     /gene="Mtnap1"
                     /inference="alignment:Splign:2.1.0"
     exon            1781..1888
                     /gene="Mtnap1"
                     /inference="alignment:Splign:2.1.0"
     exon            1889..2022
                     /gene="Mtnap1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttgttgggaa ggtgttggtg ggctatgggt tctaagagag cgccgcttgg aacttcgcgt
       61 ctccgaacgg tgcggagccg attcagtgga gtatctaagg gttgagctat tttccgcgac
      121 ctttgttgca ggtcaagaga ggagtgcgga accaggcgaa cgggataacg gactgccagc
      181 cccaccggga acggccacgc ccacctgttg gaagaggccg gacagaaagg tgtagggaga
      241 cgggcaggcg tgtgaacgcg gctgtgagaa ccggactggc tcacggcgag gaagagcctg
      301 agtgattcca agcccaggat ggaggtgtgc ccttattgta agaagccatt taagcgatta
      361 aaatcccact tgccgcactg taaaatgaca ggatcatcca tacccgctga tcaaaaagtt
      421 tctcagtcca agacagcgac acttactaaa aaagagaaga ggcccaccag agacttaacc
      481 agagctgaag agaaggagct agagagagag ggtccgaaaa gaactgtgaa agtggaaacc
      541 agccaagcag agtggacaac tgcagcctct ccgcttccag agggtgcctc ggaaggcacc
      601 catacaacaa aagcaggaga aaccaaagag aaaaagctgc tctccttccg agtactcagg
      661 cgcaccaagc cagaggtgac tctgcagaga gtcacagccc ctcagtctcc tcccaagata
      721 gaatccacca gagatgtgtc tgagtccaag ggaagtccac gctgcccctc agagacagaa
      781 gcatcttcac tggtcagctc aagggaacct ttttctacta agcaagacag agagcatgtg
      841 tcagctcagc ctcatgctaa accagccact tctgccaggc tcagattgga cacagcggat
      901 ccccaaaggc agaagcttct ggtaaaatta ttagatgtgc ctactggtga ttgtcgttct
      961 ccaaagaatg gcagccatgg ggttcagaga gtagcaccct cagtgtcaag cagggagaaa
     1021 gactcccaag atggaggcca cctctcagga gtctctcccc actctggtga ccccgagacc
     1081 caaaggtcag aatcactcct cttgggcctt cacaatggcc tgctgggtaa agcacaggtc
     1141 agagagcatc aagaacttgg ccttgggatg gagttgagcc agagtaaggg aaatactgag
     1201 aacaggatgt ccgtcacaga tggacaggaa gccactggct tgggccaccg tggtaaggac
     1261 cccattgcag ccacaaaggc aaagccaaag gccacccttg aatttaggaa tgtgttcatg
     1321 ccaccacagg gagctctgag tcagcctctc tcagtgccag ggtcagagag tcagagcctc
     1381 ccctctctag ctgtgacttc tactccagaa gagaaaggcc agttctgtgg acaaagtcaa
     1441 gtgcctgcca tgacactcag gcaccactta gcgtcacact ccgctcagtg tcatattccc
     1501 gagaacttcc ccactacctc agaggctcct cccaggtctg tgggactgga gtggtttcca
     1561 gaactctatc ctggttacgt tggactgggg gtgttgccaa ggaggcctca gccttggaac
     1621 tgggcagctc agatgcctcc tcttgccact ttccagggca ggagcgtctc aaaagttcct
     1681 tggtgggaaa gaagttcggc tgatagcagg agtttggaac ccctggcgct tacaacttcc
     1741 agcctccctc taatgagact cttgggagct gtgcacaaag gctgggtgct gtgcaacacc
     1801 accataaaga ggagtggtgt cggacgcctc tcgatgctgt ttgctggcta ctttgtcctg
     1861 tgctgtagct ggagcttcaa gcatctgaag ctgcagcgct ggcgtaagta aggatgagcg
     1921 tgcccgggag ccacggaatg tgacagagac tgcagagaag agacacttta aatttgtgcc
     1981 aggtcaggga gagtgcaaat aataaaatgc tgaaatcgcg gg
//
