LOCUS       NM_001017509            1364 bp    mRNA    linear   ROD 07-OCT-2023
DEFINITION  Rattus norvegicus cathepsin R like 1 (Ctsrl1), mRNA.
ACCESSION   NM_001017509 XM_573973
VERSION     NM_001017509.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1364)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC091563.1.
            
            On Apr 29, 2005 this sequence version replaced XM_573973.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC091563.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1364
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p14"
     gene            1..1364
                     /gene="Ctsrl1"
                     /note="cathepsin R like 1"
                     /db_xref="GeneID:498688"
                     /db_xref="RGD:1562210"
     exon            1..77
                     /gene="Ctsrl1"
                     /inference="alignment:Splign:2.1.0"
     exon            78..214
                     /gene="Ctsrl1"
                     /inference="alignment:Splign:2.1.0"
     CDS             89..1093
                     /gene="Ctsrl1"
                     /codon_start=1
                     /product="cathepsin R like 1 precursor"
                     /protein_id="NP_001017509.1"
                     /db_xref="GeneID:498688"
                     /db_xref="RGD:1562210"
                     /translation="MTPAVFIAILCLGVASGAPILDPSLDAEWQEWKKKYDKSYSLEE
                     EELRRAVWEENLKMIKLHNGENGLGKNGFTMEINEFGDTTGEEFRKMMVEFPVQTHRE
                     GKSIMKRAAGSIFPKFVDWRKKGYVTPVRRQGNCNACWAFSVTGAIEAQTIWQSGKLI
                     PLSVQNLVDCSKPQGNNGCLGGDTYNAFQYVLHNGGLQSEATYPYEGKDGPCRYNPKN
                     SSAEITGFVSLPESEDILMVAVATIGPISAGIDASHESFKFYKKGIYHEPNCSSNSVT
                     HGVLVVGYGFKGNDTGGDHYWLIKNSWGKQWGIRGYMKITKDKNNHCAIASYAHYPTI
                     "
     exon            215..337
                     /gene="Ctsrl1"
                     /inference="alignment:Splign:2.1.0"
     exon            338..487
                     /gene="Ctsrl1"
                     /inference="alignment:Splign:2.1.0"
     exon            488..712
                     /gene="Ctsrl1"
                     /inference="alignment:Splign:2.1.0"
     exon            713..875
                     /gene="Ctsrl1"
                     /inference="alignment:Splign:2.1.0"
     exon            876..993
                     /gene="Ctsrl1"
                     /inference="alignment:Splign:2.1.0"
     exon            994..1343
                     /gene="Ctsrl1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggacagtacc agagacttca gcaacttttg gagagttgag tctgtggagt ggattgagtc
       61 agctacagtc actacaggac cttgggacat gactcctgct gtcttcatag ccatcctttg
      121 tttgggagtg gcctcaggtg ctccaatact tgaccccagt ttggatgctg aatggcaaga
      181 gtggaagaaa aaatatgaca aatcatatag cctggaggaa gaagaactga ggagagcagt
      241 atgggaagaa aacctgaaaa tgatcaaact gcacaatggg gagaatggac tgggtaagaa
      301 tggcttcacc atggaaataa atgaatttgg tgacacgact ggtgaagaat tcaggaaaat
      361 gatggttgaa tttccagttc agactcacag ggaggggaaa agtatcatga aacgtgcagc
      421 tggtagcatt ttccccaaat ttgttgattg gcgaaagaaa ggctatgtga ctcctgtgcg
      481 gagacagggc aactgcaatg cttgttgggc attttctgtg actggtgcca tagaagcaca
      541 aacaatctgg caaagtggca aactcatccc tctgagtgtg cagaacctgg tagattgttc
      601 taaacctcaa ggcaacaatg gttgtcttgg tggtgataca tataatgcat tccagtatgt
      661 tttgcacaat ggcggtcttc agtccgaggc aacatatcca tatgaaggga aagatggacc
      721 atgccggtat aatccaaaga attcatctgc tgaaatcaca ggatttgtgt ccctacccga
      781 aagtgaggat atcctaatgg ttgctgtagc aactattggg cccatctctg ctggaattga
      841 tgcttcacat gaatctttca agttctataa gaaaggtatt tatcatgagc caaattgtag
      901 cagtaattct gtgactcatg gagttcttgt ggttggttat gggtttaaag gaaatgatac
      961 cggtggtgat cactactggc tgatcaaaaa cagctggggt aaacaatggg gcattagagg
     1021 ctacatgaag atcaccaaag acaagaacaa ccactgtgca attgcttcat atgctcacta
     1081 tcctactatt tgagcaacct gatagccaca agaaaacatt tggcagaaga cagccctttt
     1141 agtggagtgc tatttgcttg tcagtgaata gcctttgctt ggtatatttg tgttcctgaa
     1201 aaagtacatt gtaatgtgaa ttctgggacc cttcaactat tttggcatta tgacagctat
     1261 tccactaact aatatatgtt tattatttct gaagaaaatt tcaattttac ttactgcaca
     1321 aataaaatcc tttaaaaata aaaaaaaaaa aaaaaaaaaa aaaa
//
