LOCUS       NM_001025759            1522 bp    mRNA    linear   ROD 08-OCT-2023
DEFINITION  Rattus norvegicus sialophorin like 2 (Spnl2), mRNA.
ACCESSION   NM_001025759 XM_573369
VERSION     NM_001025759.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1522)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1522)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC098706.1.
            
            On Jul 22, 2005 this sequence version replaced XM_573369.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC098706.1, CK653372.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q11"
     gene            1..1522
                     /gene="Spnl2"
                     /note="sialophorin like 2"
                     /db_xref="GeneID:498157"
                     /db_xref="RGD:1559964"
     exon            1..265
                     /gene="Spnl2"
                     /inference="alignment:Splign:2.1.0"
     exon            266..1493
                     /gene="Spnl2"
                     /inference="alignment:Splign:2.1.0"
     CDS             380..1405
                     /gene="Spnl2"
                     /note="Leukosialin-like"
                     /codon_start=1
                     /product="sialophorin like 2 precursor"
                     /protein_id="NP_001020930.1"
                     /db_xref="GeneID:498157"
                     /db_xref="RGD:1559964"
                     /translation="MEMALLLLLFGGFWAQVVSQENLQNMSMLPFSLHSTSPIAMLPG
                     TVDPKESISPWRQTPVPASLTPLGTPELFSFETPADTSRSTPVTEPTTSQDISNTELS
                     ILAQKLSDVLSDPPVTITNPVTIRTSLETFTGSSAPPVTVTTSSTTASGQSVAITVSS
                     ESSGPPVTMTIGGTPGSGTKISRSTPNATTTMSPRQGFSAMGLLPLLIALVVVLALII
                     VLRLWHQRQKGRNLSRGGILNRLMDAWAGSARVPDEENTTGTARGSNKCSGAPETDSC
                     GRRPNVCTFFSRWKSSQCSLEELKPGKDPNLKGEKEPLVGSEAKAVETPTSDKPQVKD
                     GAAPQSQ"
ORIGIN      
        1 ggacagctta gagtctggat gtagccatcc agtttgctct tgggtgaact gtgacctgtg
       61 acttttccca gagcactctg attttgggct ggctggtagc tgctgggggg tgggggggag
      121 cctgctagaa atcagtcact tctcctggag gtagggatga ggagacttcc tggctccatg
      181 tggtccctgt acctgcgttg tccactagga agtatggctt atgtgcaaga taggacaatt
      241 tagatgatgg ctgtgaacag tactgaggga gatcaaccac cccagtcctg acaaagcctc
      301 aggaagaact ggaggtactc gccctggccc tgtgccccat ccagtaagct ggtcccaatt
      361 cccgctccca gctgtcgcta tggagatggc cttgcttctc ctcctctttg ggggcttctg
      421 ggcccaagtg gtgagccaag aaaatctgca gaatatgtcg atgttgccat tttctctgca
      481 tagcacatcc ccaattgcta tgctgccagg gaccgtggac ccaaaggaga gtatcagccc
      541 ctggaggcag accccagtcc cagcttcctt gacccccttg ggaactccag aattgttttc
      601 ttttgagaca ccagctgata ccagcaggag caccccagta actgagccta caacctctca
      661 ggacatttcc aacacggaat tatcaatact ggctcaaaaa ttatcagatg tacttagtga
      721 ccctcctgtc accataacta atcctgtgac aatcagaacc tctttagaaa cctttacagg
      781 gagtagtgca cctcccgtga ctgtgacaac aagctctacc acggccagtg gacaatctgt
      841 ggctataact gtaagctctg agagcagtgg ccctccagtc actatgacta ttggtggcac
      901 cccaggctct ggtacaaaaa tatccaggtc taccccaaat gccacaacca ccatgtcacc
      961 acgccaagga tttagtgcca tggggctgct ccccctgctc attgccttgg tggtggtttt
     1021 ggccctcatt attgtactgc ggctgtggca ccagaggcag aagggaagga acctgagcag
     1081 aggtggaata ctaaataggt tgatggatgc ctgggctggg tcagcccggg ttcctgatga
     1141 agagaacaca accggaacag cgagagggag caacaagtgc tctggagcac cagagactga
     1201 cagctgtggt cgtcggccca atgtctgcac tttcttcagc agatggaagt ctagccagtg
     1261 ctccttagaa gagctgaaac ctgggaagga tccaaacctg aagggggaga aagagcctct
     1321 ggtaggcagt gaggccaaag ctgtggaaac cccaacttct gacaagccac aagtcaaaga
     1381 tggggctgca cctcaatccc aatgagtagc tgtattcaac tagtcagctc ctcaacccca
     1441 aatctgttgt cagctgcctc acactctgca tttgtgaata tttgtggacc agaaaaaaaa
     1501 aaaaaaaaaa aaaaaaaaaa aa
//
