LOCUS       NM_001024284            2129 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus interferon-gamma-inducible GTPase 2 like 2
            (Ifgga2l2), mRNA.
ACCESSION   NM_001024284 XM_574159
VERSION     NM_001024284.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2129)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000018.1.
            
            On May 20, 2021 this sequence version replaced NM_001024284.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC093614.1, SRR26360176.2091848.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760393
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-99                JAXUCZ010000018.1  56141281-56141379
            100-2129            JAXUCZ010000018.1  56158549-56160578
FEATURES             Location/Qualifiers
     source          1..2129
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /map="18q12.1"
     gene            1..2129
                     /gene="Ifgga2l2"
                     /gene_synonym="Ifgga5"
                     /note="interferon-gamma-inducible GTPase 2 like 2"
                     /db_xref="GeneID:498873"
                     /db_xref="RGD:1565797"
     exon            1..99
                     /gene="Ifgga2l2"
                     /gene_synonym="Ifgga5"
                     /inference="alignment:Splign:2.1.0"
     exon            100..2129
                     /gene="Ifgga2l2"
                     /gene_synonym="Ifgga5"
                     /inference="alignment:Splign:2.1.0"
     CDS             121..1353
                     /gene="Ifgga2l2"
                     /gene_synonym="Ifgga5"
                     /codon_start=1
                     /product="interferon-gamma-inducible GTPase Ifgga5
                     protein"
                     /protein_id="NP_001019455.1"
                     /db_xref="GeneID:498873"
                     /db_xref="RGD:1565797"
                     /translation="MGQLFSGTAKSEALYSSFSEYFKKFKAENKIISQETITLIELYL
                     ILEDLPQANNEITSALRKLANTPLNVAVIGESGTGKSSFINVFRGVGHEDETAAPIGV
                     VETTMRRTPYRHPNIPNVVIWDLPGIGTTNFPPKDYLEKMKFCEYDFFIIISATRFRK
                     NDIDLAKAVSMMKKDFYFVRTKMDIDLENEMECKDTFSRETFLKHIRSHCVTMFKKNN
                     LHVPPIFLISNRNVSDYDFPILKAMLQNKLSTHTYHNIMVSLPNITEAAIERKHTFIQ
                     QFIWLEAFKDGVLMTIPVVDTLKDSDVEKLKMSLNHYRVLFGVDDATLQFMAKDSQVP
                     VEQLRKIIKSPYLLETKKRKALEGMLLKYMEKSASANGGLLATGLYFRKSFYLQLLFL
                     DTVAEDAKVLLRETHSRN"
ORIGIN      
        1 ggaacggggt tttcacgtga agagactaga gaacacacag gagggtgctt ccggcagtgg
       61 aacaaaagcg tatgaatcca ctgggcacag gagtttctgg gcctttgttt gctcagtgtc
      121 atgggtcagc tgttctctgg cacagctaag agtgaagcct tgtactccag cttcagtgaa
      181 tattttaaga agtttaaggc agaaaacaaa atcatttctc aggaaaccat cacattgatt
      241 gaattatacc tgatactaga agaccttccg caggcaaata atgaaattac ttctgcattg
      301 agaaaacttg ctaacacccc actcaatgta gctgtgatag gagagtctgg aacagggaag
      361 tccagcttca tcaatgtctt caggggggtt ggacatgaag atgaaactgc agctccgatt
      421 ggggtagtgg agacaaccat gaggagaact ccatacagac atcccaacat tccgaatgtg
      481 gttatttggg atctgccggg gattggaacc acaaatttcc caccaaaaga ctatctggag
      541 aaaatgaaat tctgtgagta tgacttcttc attattattt cagccacacg ctttaggaaa
      601 aacgatatag acctcgccaa agcagtcagc atgatgaaga aggatttcta ttttgtgaga
      661 accaagatgg acatagatct agaaaatgaa atggaatgca aagacacctt tagcagagaa
      721 accttcctga agcatatccg aagccattgt gtgactatgt ttaagaagaa taaccttcat
      781 gtgccgccga tcttcctgat ctcaaacaga aatgtatctg actatgattt cccgatcctg
      841 aaggccatgc tgcaaaacaa actttctact cacacatatc acaacattat ggtttccttg
      901 cctaatatta cagaggcagc cattgaaaga aaacacacct ttatacagca gtttatctgg
      961 ctagaagcct tcaaagatgg agttttgatg actattcctg tagtggacac cctcaaagac
     1021 agtgatgtgg agaagttaaa gatgagttta aaccactatc gagttctctt tggagtggat
     1081 gatgcaaccc tgcagttcat ggcaaaggat tcccaagtgc ctgttgaaca actgagaaaa
     1141 atcattaaat ctccttattt gttagaaact aagaaaagaa aagcattaga agggatgctt
     1201 ttaaaataca tggagaaatc tgcctcagct aatggtgggc tcctggcaac aggtctttac
     1261 tttaggaaat ccttttactt acaacttctt ttccttgaca cagtggctga agatgccaaa
     1321 gttctcctta gagagacaca ttcaagaaac tagttcagac tagtttaggc caagcatgga
     1381 ggtgcacacc ctaacaccag gactccactc aggaggcaga ggcaggcaca tgtctgtgag
     1441 tttgaaggca accaattagg ctacatagcg aattccaact agagttacct ggtgaggccc
     1501 tgcctcaaaa gaaccaagcc aataaaaaat atgtaagttc aaactcaagt cacccacagc
     1561 cacagaccat aaccatgtca ttagccaatc tgctaactac atgagacatc tgaggaccag
     1621 gctcattagt gtgaattata acagaattct ctcactagct gatgttctct ctcactacgt
     1681 acctttctgt ctctcaaaca cgcatgcgtg cacacatgca tgtgcgcatg tgcaagcaca
     1741 cacacacaca cacacacaca cacacacacg tacacacacg tatacacaca tacattcact
     1801 tgaactttac ctattcctgc tatcatcaag cctgtgttag agagtgacta gcatggttta
     1861 cagattctct caacaggaag aacttaagac caaagtagaa agaaaccata accacagatc
     1921 ataagtttgc taatgaacaa caaactccta aaactcctgc cacattcttg ctagggataa
     1981 ttactagaaa acatctgtaa ttctgtgcca ggaactggag aactctgaat tactgtcatt
     2041 acatgtcttg cttatggtta tttagaataa aacctgtttt aagccacaca tggcaccata
     2101 aaatatgtaa taaattgttg attaaaaaa
//
