LOCUS       NM_001013241            2824 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus leucine zipper and CTNNBIP1 domain containing
            (Lzic), mRNA.
ACCESSION   NM_001013241 XM_345605
VERSION     NM_001013241.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2824)
  AUTHORS   Daino,K., Ugolin,N., Altmeyer-Morel,S., Guilly,M.N. and
            Chevillard,S.
  TITLE     Gene expression profiling of alpha-radiation-induced rat
            osteosarcomas: identification of dysregulated genes involved in
            radiation-induced tumorigenesis of bone
  JOURNAL   Int J Cancer 125 (3), 612-620 (2009)
   PUBMED   19444910
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001013241.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC087098.1, SRR26360190.3234333.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-277               JAXUCZ010000005.1  165211359-165211635
            278-386             JAXUCZ010000005.1  165213030-165213138
            387-522             JAXUCZ010000005.1  165214297-165214432
            523-621             JAXUCZ010000005.1  165214836-165214934
            622-717             JAXUCZ010000005.1  165218399-165218494
            718-799             JAXUCZ010000005.1  165218874-165218955
            800-2824            JAXUCZ010000005.1  165221345-165223369
FEATURES             Location/Qualifiers
     source          1..2824
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..2824
                     /gene="Lzic"
                     /note="leucine zipper and CTNNBIP1 domain containing"
                     /db_xref="GeneID:366507"
                     /db_xref="RGD:1309253"
     exon            1..277
                     /gene="Lzic"
                     /inference="alignment:Splign:2.1.0"
     exon            278..386
                     /gene="Lzic"
                     /inference="alignment:Splign:2.1.0"
     CDS             286..858
                     /gene="Lzic"
                     /note="leucine zipper and CTNNBIP1 domain-containing
                     protein; leucine zipper and ICAT homologous
                     domain-containing protein"
                     /codon_start=1
                     /product="protein LZIC"
                     /protein_id="NP_001013259.1"
                     /db_xref="GeneID:366507"
                     /db_xref="RGD:1309253"
                     /translation="MASRGKTETSKLKQNLEEQLDRLMQQLQDLEECREELDGDEYEE
                     TKKETLEQLSEFNDSLKKIMSGNMTLVDELSGMQLAIQAAISQAFKTPEVIRLFAKKQ
                     PGQLRTRLAEMDRDLMVGKLERDLHTQQKVEILTALRKLGEKLTDDDEAFLSANAGAV
                     LSQFEKVSTELGSGDKVLALAGFEVEKAKK"
     exon            387..522
                     /gene="Lzic"
                     /inference="alignment:Splign:2.1.0"
     exon            523..621
                     /gene="Lzic"
                     /inference="alignment:Splign:2.1.0"
     exon            622..717
                     /gene="Lzic"
                     /inference="alignment:Splign:2.1.0"
     exon            718..799
                     /gene="Lzic"
                     /inference="alignment:Splign:2.1.0"
     exon            800..2824
                     /gene="Lzic"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caaattctgg gatctgttag ccggcggccg gcggggacgc catagcagaa ggaggttgtc
       61 ctgtttctca tcagggagga ccgagaagcg tttcgcaggc gtaggactcc ccgccacctc
      121 aggtgaccac tgggcctgct ggagcccggc cttggcggga cctgcagacc ggagcttgga
      181 gttcgtccgc gaggaggaga ctggcgcccg agcgtggcag tttatttttg ttccggtggt
      241 cctgggccga gcgctgctcc cttccgtccc cgagaagtga ttaaaatggc ttccagagga
      301 aagacggaga caagcaaact aaagcagaat ttagaagagc agttagatag actgatgcag
      361 cagctacaag atctggagga atgcagggag gagctcgatg gggatgaata tgaagaaact
      421 aaaaaggaaa ctttggagca gttgagtgag ttcaacgatt cgctgaagaa gattatgtca
      481 ggaaatatga ctttggtaga tgaactcagt ggaatgcaac tggccattca ggcagctatc
      541 agccaggcct ttaaaactcc tgaagtcatc agattgtttg cgaagaagca gccaggtcaa
      601 cttcggacaa ggctggctga gatggaccga gatctgatgg tggggaagct ggaaagagac
      661 ctgcataccc agcagaaggt ggagatactg acagctctca ggaagctcgg ggagaagctg
      721 acagatgatg atgaggcctt cctgtcagcc aacgcaggtg cagtgctcag ccagtttgaa
      781 aaagtctcca cagagctcgg ctctggagac aaggtccttg ctctggcagg gttcgaggtt
      841 gaaaaagcca agaaatgaca gcgcggtggg tttggccctg gcagccccgt ccgtcctgca
      901 cttggtgctt ccatcctgag gactcaggcg gtgcaaagag gagagactct caacaggcag
      961 caacagccca ggagcaggtg acctggagac gcggtgtggc ttctgcttcg ggtcctcgtc
     1021 cctctctgtg cctctccctt cttacatgac cccagacttg ttgggacaga gggacgttgt
     1081 tcactgcggt ttgttctgtt aagatgtctt gttcttagtg ctgatagggt gagagctgcg
     1141 agctagcggc tgtcctgcct ttgtctgcat gccttgtgat gaacagcaca gtggtgtcac
     1201 tggccaccct gcatctggag aaccttacaa agctttctgt ttttacacaa ggaaaaccaa
     1261 gatgtagagt atctgatctg cccaaagtcc ctctagatgc agggctgagg ctggggctca
     1321 ggtgtcctga atccaagttt tatttctttc ttctgtactg tttctgaggt tttttttaat
     1381 ataataatta acttgtattt gtgcaagttg gcgtctttga acactcagtg tcctacctaa
     1441 ctcagttgaa tgggcactga ggcctcttcc cagcctggtg gtgggcagca tgaatgggcc
     1501 ccattgtatc tctgggttcc taagaagcaa caatgggagc cctgttgaga gcctcctgaa
     1561 gtaacttaac cccctgcctt gtctcagtgg ggaaatggca gcccgaagcc ctctgtgtgt
     1621 gacctcttgc cagctctgag ggtggtaaca gcaagttact atcaactgtg cagtttgggg
     1681 agaaacacaa agtcatgagg aaagcaggtt tctccctggg agccatagct ctgcatgggc
     1741 aacctcgagc ctcgccctca cacaaacctt ccaggcctcg cctgcattgt agtcctttgt
     1801 gtatttctca ttattctttt tttttttttt gcactttata aaaattaaaa acatttttac
     1861 tgcttcttat aaactaaagt tctactaggt gctttgccaa ctggacaaat taggggacct
     1921 cagctatgta aatgccttat ttggaactgt aatgtctttt ggactctttg agaggtgtgg
     1981 gtctataagc caacaagacg gcccagtgag taaaggtgct tgctgccatt cctgatgccc
     2041 tgagtttaat ccccagatcc acctgatgaa ggaagagaat tgacttttac aaggtatctt
     2101 ctgacctcca cagatgttcc atggcccata tgtgtacaca tgtacacaca catatatgca
     2161 cacttataca ataaataaat agtgagcagg agtccccatg ctggagtcgt aggctcagac
     2221 tcttctagcc actcctcctc ccaagaagcc agtgctcaga tgagcactgc tgggccttac
     2281 cagtgggctg tctctattcg ccgttcagtg tagaacaccc agaaagctga tcaccgctgt
     2341 aacccgcggt gctgtgtgtg ccacccccat tccgtagaga gaagttcata ttacccagaa
     2401 gtcccagttc cacagtgtag attcagtgat gctgtgcagc tcccacccga gcaccaagtc
     2461 atgcccatcg ttcatgcagg agagcctgtg tctattccag tcactccgag caagatgcct
     2521 tcctccagcc tccagcctcc tctgagctgc tctctcgtct ctacagctgg acagtgcata
     2581 tgaactttac atgggattat accctgtgtt cctggttatg tatcgggctt tttcatgcag
     2641 tatttttagg gctaactcac attgtaacac actttgaaac ttcatttttg tgcctgacta
     2701 atactaccct gtatgaatac tatattttgt ttagccgtgt gtctgatgaa catctgggtt
     2761 gttttcagat tttgtgaaca gtgccattaa gaacatttct gcacgagtac atgttgagtt
     2821 ccta
//
