LOCUS       NM_001130545             545 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus Ly6/Plaur domain containing 2 (Lypd2), mRNA.
ACCESSION   NM_001130545 XM_001073630 XM_006241726 XM_216960
VERSION     NM_001130545.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 545)
  AUTHORS   Prunotto,M., Farina,A., Lane,L., Pernin,A., Schifferli,J.,
            Hochstrasser,D.F., Lescuyer,P. and Moll,S.
  TITLE     Proteomic analysis of podocyte exosome-enriched fraction from
            normal human urine
  JOURNAL   J Proteomics 82, 193-229 (2013)
   PUBMED   23376485
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1 and CB716336.1.
            
            On or before Jun 20, 2015 this sequence version replaced
            XM_006241726.2, XM_001073630.1, XM_216960.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BG373030.1, CB716336.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676811 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-17                JAXUCZ010000007.1  108508566-108508582 c
            18-525              CB716336.1         1-508
            526-545             JAXUCZ010000007.1  108506545-108506564 c
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     gene            1..545
                     /gene="Lypd2"
                     /note="Ly6/Plaur domain containing 2"
                     /db_xref="GeneID:300017"
                     /db_xref="RGD:1307892"
     exon            1..131
                     /gene="Lypd2"
                     /inference="alignment:Splign:2.1.0"
     CDS             74..457
                     /gene="Lypd2"
                     /note="ly6/PLAUR domain-containing protein 2"
                     /codon_start=1
                     /product="ly6/PLAUR domain-containing protein 2 precursor"
                     /protein_id="NP_001124017.2"
                     /db_xref="GeneID:300017"
                     /db_xref="RGD:1307892"
                     /translation="MQGTRMVLLALILSTFGELAMALRCYACPDPVSASDCVKITPCH
                     TNETMCKTTLYSREIVFPFLGDSTVTKSCASKCEPSDVDGIGLTRPVSCCNSDLCNVD
                     GAPSLGGPGGLVLVLPLIFLLHVLL"
     exon            132..251
                     /gene="Lypd2"
                     /inference="alignment:Splign:2.1.0"
     exon            252..545
                     /gene="Lypd2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agccaaccgg tcagaccacc actgtaggca ttttggcatc cccacggggc aggcctgttc
       61 gagcacctct atcatgcagg ggacccggat ggtgctgttg gcactgatat tgagcacctt
      121 cggggaactt gctatggcct tacggtgcta tgcctgtccg gatcctgtga gtgcgtctga
      181 ctgcgtcaag atcacaccct gccacaccaa tgaaaccatg tgcaagacca ctctctactc
      241 ccgggagata gtgtttcctt tcctggggga ctccacggtg accaagtcct gtgccagcaa
      301 gtgcgagcct tcagacgtgg atggcattgg gctaacccgg ccagtgtcct gctgcaattc
      361 tgacctatgc aacgtggacg gggcacccag cctgggcggt cctggtggcc tggtccttgt
      421 cctgccactt atctttctac tgcatgtcct gctgtaaagc catggccatt tggctctgtc
      481 cccttgtccc tgacagccca gttccctaat gccttgaaga agtacaatag ccacctgcat
      541 cagtc
//
