LOCUS       XM_039084963             882 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus lysozyme G2 (Lyg2), mRNA.
ACCESSION   XM_039084963
VERSION     XM_039084963.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..882
                     /gene="Lyg2"
                     /note="lysozyme G2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein, and 83%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:100910813"
                     /db_xref="RGD:6496811"
     CDS             1..645
                     /gene="Lyg2"
                     /codon_start=1
                     /product="lysozyme g-like protein 2"
                     /protein_id="XP_038940891.1"
                     /db_xref="GeneID:100910813"
                     /db_xref="RGD:6496811"
                     /translation="MVPSVVFWGLIALIAGTARGSYPGFTHSTNPHVHSRLYHGCYGD
                     VMTMETFGAPCDINNLMNCGIHGSEMFAEMDLKAIKPYRILIKEVGQRHCIDPALIAA
                     IISRESHGGAVLQNGWDHKGQRFGLMQLDKNMYHPIGSWDSKEHLLQSVGILTERIKA
                     LKRKFPTWNAAQHLKGGLTAFKSGMETIVTPADIEGDLVDDIIARAKFYKRHGF"
ORIGIN      
        1 atggtaccct cggtggtgtt ctggggactt attgctctca ttgcaggcac tgccaggggc
       61 tcatatcctg ggttcactca ctccacaaac cctcatgtgc actctcgtct ataccatggc
      121 tgctacggag atgtcatgac catggagact tttggggctc cctgtgacat aaacaatctg
      181 atgaattgtg ggatccacgg ttctgaaatg tttgccgaga tggacttgaa agccataaag
      241 ccttaccgga tcctcatcaa agaagtggga cagaggcact gcatcgaccc agccctcatc
      301 gctgccatca tctccaggga aagccacggc ggggctgtcc tgcaaaatgg ctgggaccat
      361 aaaggacaga ggtttggctt gatgcagctt gataaaaaca tgtaccatcc tattggttcc
      421 tgggacagca aggaacacct tctacagtct gttgggattc tgacagaaag aattaaggca
      481 ctgaagagga aatttcctac ctggaatgca gctcagcacc tgaaaggtgg tctgactgct
      541 tttaagtcgg ggatggaaac tattgtcact cctgcagaca tagaaggcga cttagtggat
      601 gacatcattg cccgtgccaa attctataaa agacatggct tctaggtaga gagagttaca
      661 ttggtgaggc actcagctag tctctctttc aaggtttaac attagcccat ttcactcaat
      721 aggagcaaag aaatggttaa aattatgaaa gaaagttcat ctccgaagtt ttcaatcaaa
      781 gctagctaaa gaaaggaagg aagagaggtg aggacatcca accgttcagt tgcttgaaca
      841 actgaatacg tgcaaggccc caggtcccat ctttatcaca aa
//
