LOCUS       NM_001098838             798 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus lysozyme G1 (Lyg1), mRNA.
ACCESSION   NM_001098838 XM_578788
VERSION     NM_001098838.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 798)
  AUTHORS   Irwin,D.M. and Gong,Z.
  TITLE     Molecular evolution of vertebrate goose-type lysozyme genes
  JOURNAL   J Mol Evol 56 (2), 234-242 (2003)
   PUBMED   12574869
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000009.1.
            
            On Jun 28, 2007 this sequence version replaced XM_578788.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            CDS exon combination :: SRR22582419.33829.1 [ECO:0000331]
            RNAseq introns       :: partial sample support SAMEA5760434
                                    [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-25                JAXUCZ010000009.1  47678663-47678687   c
            26-101              JAXUCZ010000009.1  47673366-47673441   c
            102-206             JAXUCZ010000009.1  47671175-47671279   c
            207-400             JAXUCZ010000009.1  47670309-47670502   c
            401-533             JAXUCZ010000009.1  47667363-47667495   c
            534-798             JAXUCZ010000009.1  47666938-47667202   c
FEATURES             Location/Qualifiers
     source          1..798
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q21"
     gene            1..798
                     /gene="Lyg1"
                     /gene_synonym="RGD1560332"
                     /note="lysozyme G1"
                     /db_xref="GeneID:503254"
                     /db_xref="RGD:1560332"
     exon            1..25
                     /gene="Lyg1"
                     /gene_synonym="RGD1560332"
                     /inference="alignment:Splign:2.1.0"
     exon            26..101
                     /gene="Lyg1"
                     /gene_synonym="RGD1560332"
                     /inference="alignment:Splign:2.1.0"
     CDS             59..652
                     /gene="Lyg1"
                     /gene_synonym="RGD1560332"
                     /note="lysozyme g-like protein 1; lysozyme G-like 1;
                     lysozyme g-like protein 1-like"
                     /codon_start=1
                     /product="lysozyme g-like protein 1 precursor"
                     /protein_id="NP_001092308.1"
                     /db_xref="GeneID:503254"
                     /db_xref="RGD:1560332"
                     /translation="MSPLWLLLGLLALTGSSESSNWGCYGNIRTLDTPGASCRIGRRY
                     GLSYCGVRASERLAEVDRPYLLRYQPTMRLVGQKYCMDPAVIAGVLSRESPGGNFVLD
                     MGNMGSGLGMVKESKFYPPTAWKSETWVSQKTQTLTSSIKEIKTRFPTWTTDQHLRGG
                     LCAYSKGPNFVRSNQDLNCDFCNDVLARAKYFKNHGF"
     exon            102..206
                     /gene="Lyg1"
                     /gene_synonym="RGD1560332"
                     /inference="alignment:Splign:2.1.0"
     exon            207..400
                     /gene="Lyg1"
                     /gene_synonym="RGD1560332"
                     /inference="alignment:Splign:2.1.0"
     exon            401..533
                     /gene="Lyg1"
                     /gene_synonym="RGD1560332"
                     /inference="alignment:Splign:2.1.0"
     exon            534..798
                     /gene="Lyg1"
                     /gene_synonym="RGD1560332"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggaagagga gctgactgaa gacagcattt caggtaccat agaacccgat acccggacat
       61 gtctcctctg tggctgcttc tgggcctcct ggctctgact ggctcctctg aaagcagcaa
      121 ttgggggtgc tatggaaaca ttcgcaccct ggacacccca ggagcatcct gcaggattgg
      181 aagacgctat ggcctgagtt actgtggagt ccgtgcctct gaacggctgg ctgaagtaga
      241 caggccatat cttctgagat accaacccac catgagactt gttgggcaga aatactgtat
      301 ggatcctgca gtgatcgctg gtgtcctgtc aagggagtct cctggtggca attttgtatt
      361 ggacatgggc aacatgggca gtggactcgg gatggtgaag gagtcaaaat tctaccctcc
      421 cacagcttgg aagagtgaga cctgggtttc ccagaaaact cagactctga catccagcat
      481 caaagagatc aagactaggt ttccaacctg gaccacggac cagcacctga gaggcggact
      541 ctgtgcctac agtaaaggtc ccaactttgt ccgaagcaac caagacctga actgtgactt
      601 ctgcaacgat gtcctcgcga gagccaaata cttcaagaac catggattct agcacatcgg
      661 gaaaaactca agttcattgt tggactcgag gcttcttctg tcccactgat gtctagctgg
      721 tgaagcctgc agtcgcacat ctgagttgaa tctgaaggct gtcaaaatat catgaattac
      781 attaaagaaa atattatc
//
