LOCUS       NM_001106128             936 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus lymphocyte antigen 86 (Ly86), mRNA.
ACCESSION   NM_001106128 XM_001064540 XM_225636
VERSION     NM_001106128.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 936)
  AUTHORS   Ogata H, Su I, Miyake K, Nagai Y, Akashi S, Mecklenbrauker I,
            Rajewsky K, Kimoto M and Tarakhovsky A.
  TITLE     The toll-like receptor protein RP105 regulates lipopolysaccharide
            signaling in B cells
  JOURNAL   J Exp Med 192 (1), 23-29 (2000)
   PUBMED   10880523
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473977.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_225636.4, XM_001064540.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DV726856.1, DV721276.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5756307,
                                           SAMEA5760383 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p12"
     gene            1..936
                     /gene="Ly86"
                     /note="lymphocyte antigen 86"
                     /db_xref="GeneID:291359"
                     /db_xref="RGD:1309936"
     exon            1..235
                     /gene="Ly86"
                     /inference="alignment:Splign:2.1.0"
     CDS             25..588
                     /gene="Ly86"
                     /codon_start=1
                     /product="lymphocyte antigen 86"
                     /protein_id="NP_001099598.1"
                     /db_xref="GeneID:291359"
                     /db_xref="RGD:1309936"
                     /translation="MSGGGRTSEAFLWDLLIIGHTQSLTMNSVAAALLVWILTSPSSS
                     DHGREKGWPTHMACSSGGLEVVYQSCDPFQDFGLSIDQCSKQIQPNLNIRFGIILRED
                     IRKLFLDIAFVAKGSSLLNYSYPLCEEDQPKFSFCGRRKGEQIYYAGPVNNPGLDVPQ
                     GEYQLLLELYNENHATVACANATVTCS"
     exon            236..322
                     /gene="Ly86"
                     /inference="alignment:Splign:2.1.0"
     exon            323..451
                     /gene="Ly86"
                     /inference="alignment:Splign:2.1.0"
     exon            452..504
                     /gene="Ly86"
                     /inference="alignment:Splign:2.1.0"
     exon            505..936
                     /gene="Ly86"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaaactgaac acaccactcc tttcatgagc gggggaggaa gaacctcaga ggccttttta
       61 tgggacttgc ttatcattgg tcacacacaa tccctcacca tgaacagtgt cgcagctgcc
      121 ctccttgtgt ggattctgac ttctcccagc agcagtgacc atggcagaga aaaaggttgg
      181 cccacgcaca tggcctgcag cagcggaggc ttggaagtag tctaccagag ctgtgatccc
      241 ttccaggatt ttggcctttc cattgaccag tgttccaaac agatccagcc aaatctcaac
      301 attagatttg gcatcattct gagagaagac atcagaaagc tgtttctgga catagctttt
      361 gtggcgaaag gttcttctct tctgaactac tcctatcccc tttgtgagga ggaccagccc
      421 aagttctctt tctgtggaag aaggaaagga gagcagatat actatgccgg ccctgtcaat
      481 aaccctgggc ttgatgttcc acagggagaa taccagctct tgctggaact gtacaatgaa
      541 aaccatgcta ctgtggcttg tgctaatgcc actgtcacct gctcctgagc atggcctgca
      601 agaaaatgca caggaaactc agcctcaggg aaccccaagg tcacctcgct gcaagaacca
      661 ccgatgacaa agaggaacta caaagaagtt tctcgtgggt cactctgccg atcttggctc
      721 tagggacaga taatcccaga cccaatgaat gtaataaaac ctccaaaatt gtctatttct
      781 gaggactcta agcagtcccg aggccccatc tataacagct ctccttatgg aattgcatct
      841 catcaaagtt acctcttata tgccccttag caacacttct ttgaagtcac ctgggatgta
      901 aaaaaataaa ataataaaaa taaaagctgc cctgta
//
