LOCUS       XM_002729821            2460 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus lymphocyte antigen 6 complex, locus M
            (Ly6m), mRNA.
ACCESSION   XM_002729821
VERSION     XM_002729821.5
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_002729821.6.
            
            On Jan 21, 2021 this sequence version replaced XM_002729821.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2460
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2460
                     /gene="Ly6m"
                     /note="lymphocyte antigen 6 complex, locus M; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 1 Protein, and 91% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:100361556"
                     /db_xref="RGD:2324576"
     CDS             1..336
                     /gene="Ly6m"
                     /codon_start=1
                     /product="lymphocyte antigen 6D"
                     /protein_id="XP_002729867.3"
                     /db_xref="GeneID:100361556"
                     /db_xref="RGD:2324576"
                     /translation="MRIHLLWLLPLILLGSSAQALQCHECSTGENCYKPTSCPSLSRY
                     CLINWHTPPGQQPTITKTCAYTCPDSQQALDNSKSFCCNTDLCNSGRSLRVSWGLLTL
                     GILYIYLSQ"
ORIGIN      
        1 atgagaattc acctgctttg gttgttgccc ctgatcctgc tgggatcctc ggcccaggcg
       61 ctgcagtgtc atgagtgcag cactggagag aactgctaca agcctacatc ttgccccagc
      121 ttaagccgct actgcttgat caactggcat acaccgccag gccagcaacc aaccataaca
      181 aaaacatgtg catatacctg ccctgacagt caacaggccc tagacaactc caagtccttc
      241 tgttgcaaca cagacctctg caacagtggc aggagcctcc gtgtcagctg gggactgctg
      301 accctcggca tcctgtatat ctatctcagc cagtaggtgc acagctcaca agctacagag
      361 ttagaagcct ggtgccatca tgggactgga atgtgtaggc ggggtacgtc tttaactgca
      421 atcagaagga ttccaagaga ccaactcatc ggtgtggctg atggagagcg ctacattcag
      481 aactcttgtc tgcaagctgg tcatctgctg gcctccaaga gctggttcaa ggacgctgtc
      541 aaggtcctga tcctgttact agggcctggg gtaggcccct caggaggtcc aatgagctgt
      601 tttggggctt tcttttgtca cacatccagt gtctcccact aacacctaag agaaactgag
      661 actgtgcatt gccacttcaa aagagttgag cgtcagaacg tcattacctg ctgactggtg
      721 acccagtagc gaaatgtgct gctttaacct gaattcaaag acgtttggca agtgcaaacc
      781 ctatggagag gcctcccttc cggctgtggg ggaagggcag atgctggcac agattagcta
      841 gaacaaggtg tggatcagtc tgccttcagc aggattgttg catcctgtga tgtcagctgt
      901 gtagcctcag ccccagcaaa cctcacccct gggttgggct tgaggattct atcctgggac
      961 aacaccaatc tcatcaggac ttcagaaggt ccctgtgaac tccagtctac tctagggcaa
     1021 agagcaagag aacccagaac tgtcgagctg tgagtgatgg ctgaagtgtt tcctctcttc
     1081 tctgcctgtg gtccagctcc aggactccat cagtcagtcc tagtgattgt atgccctcca
     1141 tcatagagaa gttgctcccg ttcagtgggt gtctgccttg ttcttcatat ctgaaagcct
     1201 gggtaacacc ttgtcccgat gaagagatta gatctgggaa ctaaattcta agctggcggc
     1261 agttttggtg ggtgagtcca ttggctggat tctccctaac tcttcagagc catgtttaga
     1321 acactgtgag ctcattgtgc ctgtcactcc atgcccttgt tccattccaa gtactttctg
     1381 tcgtgttttc catagatcat gcctcatcta ggtctgatca aaaggcaccc acgtgatgct
     1441 gttcccccct tcttacacaa gggtgtgctg tgaggcacca gatcagtgca ctgggactgg
     1501 agagagggct gaactcaggt gacctcctgc ttgtcacctc agtgtgtcaa agagcggtac
     1561 tagctaatgg aggcagatgg gctgctcctg gctgttcctg gttaggaagg gcagagctgg
     1621 tgaacaaccg acttctgctg aagagtggtg cttggagcca aaacttggta gaggacccca
     1681 agagagggac agtcatcaga tgagaacagg gtatgcaaga gagcatgtgg agctgcatga
     1741 ggggccttgt tactatcgaa gtggggattt ccatgagtgc cctgtctggc ttctgaactc
     1801 cccgggtcag tggactgatt gagcagggat ctcgttagtc acgcttctcc aaaaatccag
     1861 ggtctcactg gctttcttgg tagtgtgcat atgctgggga cacagtgagc ttcccacgcc
     1921 cagcactgat gccacagagg tctggagact gggtcagggg ctggtgctcc ataggttcca
     1981 aaagtcccac aaaatttact ttgttacagt gtccatcctt caagcatcca ctacagaatg
     2041 gttttccatg ctgcagctcg catccctcag acccaacctg gaaggggcca acccccgccg
     2101 ccactcactc ctatgtcctc aggcacagac taatttttct gggctttcca cttgcttacc
     2161 agtaaaatga gaacacaagg ctttgtgtca aaaaggtaga gacaacaaat taaggcccaa
     2221 gatgtagttg agatgctaga gcgcttgctt tgtggtgtat gatttccggg ctcccaatct
     2281 cagctctatg tcaagggaac attatggctc catctataac cccagcgctt ggaagtggag
     2341 gcaggagggt cagaagatca aggacatctt tggctgatag caaggttgaa gccacatgag
     2401 gccaacctgg gatataagag atagtttcta aataaacgaa taaactatgc tatagtctca
//
