LOCUS       NM_001395024             760 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus lymphocyte antigen 6 family member K (Ly6k),
            mRNA.
ACCESSION   NM_001395024
VERSION     NM_001395024.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 760)
  AUTHORS   Endo,S., Yoshitake,H., Tsukamoto,H., Matsuura,H., Kato,K.,
            Sakuraba,M., Takamori,K., Fujiwara,H., Takeda,S. and Araki,Y.
  TITLE     TEX101, a glycoprotein essential for sperm fertility, is required
            for stable expression of Ly6k on testicular germ cells
  JOURNAL   Sci Rep 6, 23616 (2016)
   PUBMED   27005865
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 760)
  AUTHORS   Fujihara,Y., Okabe,M. and Ikawa,M.
  TITLE     GPI-anchored protein complex, LY6K/TEX101, is required for sperm
            migration into the oviduct and male fertility in mice
  JOURNAL   Biol Reprod 90 (3), 60 (2014)
   PUBMED   24501175
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 760)
  AUTHORS   Maruyama,M., Yoshitake,H., Tsukamoto,H., Takamori,K. and Araki,Y.
  TITLE     Molecular expression of Ly6k, a putative
            glycosylphosphatidyl-inositol-anchored membrane protein on the
            mouse testicular germ cells
  JOURNAL   Biochem Biophys Res Commun 402 (1), 75-81 (2010)
   PUBMED   20920470
REFERENCE   4  (bases 1 to 760)
  AUTHORS   von Allmen,C.E., Bauer,M., Dietmeier,K., Buser,R.B., Gwerder,M.,
            Muntwiler,S., Utzinger,S., Saudan,P., Bachmann,M.F. and Beerli,R.R.
  TITLE     Identification of Ly-6K as a novel marker for mouse plasma cells
  JOURNAL   Mol Immunol 45 (10), 2727-2733 (2008)
   PUBMED   18372042
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360181.2611758.1,
                                           SRR26360186.1892607.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-175               JAXUCZ010000007.1  108575276-108575450 c
            176-270             JAXUCZ010000007.1  108574910-108575004 c
            271-369             JAXUCZ010000007.1  108574061-108574159 c
            370-760             JAXUCZ010000007.1  108572732-108573122 c
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     gene            1..760
                     /gene="Ly6k"
                     /note="lymphocyte antigen 6 family member K"
                     /db_xref="GeneID:100363492"
                     /db_xref="RGD:2322953"
     exon            1..175
                     /gene="Ly6k"
                     /inference="alignment:Splign:2.1.0"
     CDS             132..671
                     /gene="Ly6k"
                     /note="lymphocyte antigen 6 complex, locus K-like;
                     lymphocyte antigen 6K-like"
                     /codon_start=1
                     /product="lymphocyte antigen 6K precursor"
                     /protein_id="NP_001381953.1"
                     /db_xref="GeneID:100363492"
                     /db_xref="RGD:2322953"
                     /translation="MEGPKGTLRHGLPRKTRHPLEMVILLALLIAVGLPLVKTNVDDE
                     EEKITCHVCESESNLNCSNPKACDSGKKFCLLAVTRIFERFFYVSKQCTQLCPTPPLF
                     FAETPSEPKGFLVEKPLPFLFVKCCKWDLCNEKFPVSITMLKQESGKASERRHRYTEL
                     LLPGFMVLTANGLSALSLL"
     exon            176..270
                     /gene="Ly6k"
                     /inference="alignment:Splign:2.1.0"
     exon            271..369
                     /gene="Ly6k"
                     /inference="alignment:Splign:2.1.0"
     exon            370..760
                     /gene="Ly6k"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcagacatca atgagacacc aagactggct gggagctgga atgttccaga aagagcacca
       61 gcagcaccct gtagagggca gtgtggggag atcgacccca aaggaactga gtctccgact
      121 tcaccagtca gatggaggga cccaagggca cgctgaggca cgggctgccg agaaagacta
      181 ggcatcctct ggagatggtg atcctactgg ccttgctcat agctgtgggc ttaccgttgg
      241 tgaagaccaa cgtggatgac gaggaggaga agatcacctg tcacgtttgt gagtctgaga
      301 gcaaccttaa ctgctcgaat ccaaaggcct gtgattctgg caaaaagttc tgtttgttgg
      361 ctgtcacacg aatattcgaa cgtttcttct acgtgtcaaa acagtgcacc caattgtgtc
      421 caaccccccc actttttttt gctgaaacac catctgagcc taaggggttt ctggtcgaaa
      481 agcccttgcc cttcttattt gtaaagtgct gtaaatggga cttatgtaat gaaaagtttc
      541 cagtctccat cactatgctc aaacaagagt ctggaaaagc cagtgagaga agacatagat
      601 acactgagct gttactgcct ggcttcatgg tccttactgc taatggcctc tcagccctca
      661 gcctgctgta agccacagaa agacctggag catgccctgt ggggcatgaa ttttctgtac
      721 cctgctggtc ccttctaatt aaattttttt tcctttgtta
//
