LOCUS       NM_001134839             928 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus lymphocyte antigen 6 family member H (Ly6h),
            mRNA.
ACCESSION   NM_001134839 XM_001074175 XM_235426
VERSION     NM_001134839.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 928)
  AUTHORS   Wu,M., Puddifoot,C.A., Taylor,P. and Joiner,W.J.
  TITLE     Mechanisms of inhibition and potentiation of alpha4beta2 nicotinic
            acetylcholine receptors by members of the Ly6 protein family
  JOURNAL   J Biol Chem 290 (40), 24509-24518 (2015)
   PUBMED   26276394
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On or before Sep 10, 2008 this sequence version replaced
            XM_001074175.1, XM_235426.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CB721061.1, SRR26360172.2485567.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840105, SAMN12840109
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-84                JAXUCZ010000007.1  109141296-109141379 c
            85-212              JAXUCZ010000007.1  109140918-109141045 c
            213-329             JAXUCZ010000007.1  109140361-109140477 c
            330-928             JAXUCZ010000007.1  109139527-109140125 c
FEATURES             Location/Qualifiers
     source          1..928
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     gene            1..928
                     /gene="Ly6h"
                     /note="lymphocyte antigen 6 family member H"
                     /db_xref="GeneID:300025"
                     /db_xref="RGD:1311896"
     exon            1..84
                     /gene="Ly6h"
                     /inference="alignment:Splign:2.1.0"
     exon            85..212
                     /gene="Ly6h"
                     /inference="alignment:Splign:2.1.0"
     CDS             146..565
                     /gene="Ly6h"
                     /note="lymphocyte antigen 6 complex, locus H; lymphocyte
                     antigen 6H"
                     /codon_start=1
                     /product="lymphocyte antigen 6H precursor"
                     /protein_id="NP_001128311.1"
                     /db_xref="GeneID:300025"
                     /db_xref="RGD:1311896"
                     /translation="MLPAAMKSLGLALLALLLCPSPAHGLWCQDCTLANSSHCAPKQC
                     QPTDTVCASVRITDPSSSRKDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVD
                     CCEKDLCNGASAAGRSPWALAGGLLLSLGPALLWAGP"
     exon            213..329
                     /gene="Ly6h"
                     /inference="alignment:Splign:2.1.0"
     exon            330..928
                     /gene="Ly6h"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggtaaggtgc gctccctcct cccgcttttc ctgtccggac gcacctactg ctccttgggg
       61 agagacgaca ccctccccac gcaggcctgc gccccagagg acccccgcct gcagcccccg
      121 cgcctctctc aggccctatc ggagcatgct gcctgcagcc atgaagagcc tcggcctggc
      181 gctactggcc ttgcttctct gcccctcgcc cgcccatggc ctgtggtgcc aggactgcac
      241 cctggccaat tccagccatt gcgccccgaa gcagtgccag cccactgata ccgtttgtgc
      301 cagcgtgcgg atcacggacc ccagcagcag caggaaggat cattctgtga acaagatgtg
      361 tgcttcctcc tgcgacttcg ttaagcgcca ctttttctca gactatctga tggggttcat
      421 taactctggg atcttaaaag tcgacgtgga ctgctgcgag aaagatttgt gcaacggggc
      481 atcagcagcg ggacgcagcc cctgggccct ggctgggggg ctcctgctca gcctggggcc
      541 tgctctcctc tgggctgggc cctaagaccc ctccctccct cctgctgggc tttggagctt
      601 gtcccctgag cctgttgctg tcccttccca gcctagcctg gctggggcag agacagcaag
      661 ggcttggcat caaggtctga ggctctcaac ctccctagat gtgagtgaac cttctccgtt
      721 tctccaccag gtccatatcc caggccgctg gatatctcca ggagtccaga catcctggca
      781 ggaagctggg gtggggggga gggggagggc gagggactct gggactctcc aggttcctga
      841 ggggagggag gtcaagccag ggacagccca acagcctggc ctgaggggca ttaactacag
      901 agaaataaag tcacttctga gtcttgtg
//
