LOCUS       NM_001017467            1289 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus lymphocyte antigen 6 family member E (Ly6e),
            mRNA.
ACCESSION   NM_001017467 XM_576293
VERSION     NM_001017467.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1289)
  AUTHORS   Wu M, Puddifoot CA, Taylor P and Joiner WJ.
  TITLE     Mechanisms of inhibition and potentiation of alpha4beta2 nicotinic
            acetylcholine receptors by members of the Ly6 protein family
  JOURNAL   J Biol Chem 290 (40), 24509-24518 (2015)
   PUBMED   26276394
REFERENCE   2  (bases 1 to 1289)
  AUTHORS   Zammit DJ, Berzins SP, Gill JW, Randle-Barrett ES, Barnett L,
            Koentgen F, Lambert GW, Harvey RP, Boyd RL and Classon BJ.
  TITLE     Essential role for the lymphostromal plasma membrane Ly-6
            superfamily molecule thymic shared antigen 1 in development of the
            embryonic adrenal gland
  JOURNAL   Mol Cell Biol 22 (3), 946-952 (2002)
   PUBMED   11784869
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079165.1.
            
            On Apr 29, 2005 this sequence version replaced XM_576293.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079165.1, CO402517.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1289
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     gene            1..1289
                     /gene="Ly6e"
                     /note="lymphocyte antigen 6 family member E"
                     /db_xref="GeneID:362934"
                     /db_xref="RGD:1565342"
     exon            1..206
                     /gene="Ly6e"
                     /inference="alignment:Splign:2.1.0"
     exon            207..306
                     /gene="Ly6e"
                     /inference="alignment:Splign:2.1.0"
     CDS             237..647
                     /gene="Ly6e"
                     /note="lymphocyte antigen 6E; lymphocyte antigen 6
                     complex, locus E"
                     /codon_start=1
                     /product="lymphocyte antigen 6E precursor"
                     /protein_id="NP_001017467.1"
                     /db_xref="GeneID:362934"
                     /db_xref="RGD:1565342"
                     /translation="MSAASSMRVFLPVLLAALLGVEQVHSLMCFSCTDQKNNINCLWP
                     VSCSSTDNYCITLSAAAGFGNVNLGYTLNKGCSPTCPRENININLGVASVNSYCCQSS
                     FCNFSTAGLGLRASIPLLGLGLLLSLLAVLRLSP"
     exon            307..426
                     /gene="Ly6e"
                     /inference="alignment:Splign:2.1.0"
     exon            427..1263
                     /gene="Ly6e"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caagggcaca gccagagctc ccagagtcca gcccctaggg tcgtcctccc caccagccag
       61 agacccgccc acagcccgta gaacgccccg cctgcagccc gcccccgcca tctgcgctcc
      121 gctccgccgg ctcccgagcc ttcagccttt ggtgatttcc aggacctaag gtttcggttt
      181 tatcttcggg gctgcttcac ccggagtagg cttctttggc ttgtgacctt cagcagatgt
      241 ctgccgcttc cagcatgaga gtcttcttgc ctgtgctgct ggcagccctt ctgggtgtgg
      301 aacaagtcca ttccctgatg tgcttctcct gcaccgatca gaagaacaat atcaattgcc
      361 tatggccggt atcatgctcc agcacagaca attactgtat cacgttatct gctgccgcgg
      421 gcttcgggaa tgtcaacctt ggctacaccc tgaataaggg ttgctccccc acctgccccc
      481 gtgaaaacat caatattaac ctcggtgtgg cgtccgtgaa tagctactgc tgccagagct
      541 ccttctgcaa tttcagcacg gctggccttg gacttcgtgc tagtatccca ctgctgggcc
      601 ttggactcct gctcagcttg ttggctgtgc tgcggctgag cccctgaccg cccccatgtg
      661 ttccccacat ccccccagct caggaagaaa agcccagctc cttttaggtc ccaggggacc
      721 ctaggagcct tcagctcctc ctgggtgtgt ctagttcccc ttcacactct ctcagcatca
      781 gggctaagta ccaaattcac ccatatctgc tctgttgaaa tggtactggc tacccttgct
      841 tccagagcca gtcttataac ctcctttggg gaaccaggga aggggtgaag atctccttgg
      901 aatctcaaga gtacagagtc agccttgagt cctgaaggca caatgacaag gatgtctaac
      961 ccaaatgaat gtgcacctgt gttgctcacg gtatccgtgt gtgaatgaag ccgctaggat
     1021 tctgggatgg gtaaagaaga cctgaaagat tctagagcag aaggcctgtg tctccatcaa
     1081 aacctcttcc cctggaatta ctgtactcat gttgcattcc ctgtgcagga ggctgctcac
     1141 agagggctgc catccctcca gatgaaggct ccaaccccca gatccagtcc ctccctgccc
     1201 tctctgcccg cactggcttc ctgctgctat tctagtgcct caaataaact gttcccaccc
     1261 gttaaaaaaa aaaaaaaaaa aaaaaaaaa
//
