LOCUS       NM_001009500             873 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus Ly49 inhibitory receptor 7 (Ly49i7), mRNA.
ACCESSION   NM_001009500 XM_579300
VERSION     NM_001009500.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 873)
  AUTHORS   Nylenna,O., Naper,C., Vaage,J.T., Woon,P.Y., Gauguier,D.,
            Dissen,E., Ryan,J.C. and Fossum,S.
  TITLE     The genes and gene organization of the Ly49 region of the rat
            natural killer cell gene complex
  JOURNAL   Eur J Immunol 35 (1), 261-272 (2005)
   PUBMED   15593300
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On Oct 7, 2022 this sequence version replaced NM_001009500.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY659934.1, SRR26360186.1021209.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389, SAMN06680423
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-164               JAXUCZ010000004.1  166598660-166598823 c
            165-254             JAXUCZ010000004.1  166597155-166597244 c
            255-470             JAXUCZ010000004.1  166595980-166596195 c
            471-613             JAXUCZ010000004.1  166593930-166594072 c
            614-717             JAXUCZ010000004.1  166590445-166590548 c
            718-873             JAXUCZ010000004.1  166585010-166585165 c
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q42"
     gene            1..873
                     /gene="Ly49i7"
                     /note="Ly49 inhibitory receptor 7"
                     /db_xref="GeneID:494210"
                     /db_xref="RGD:1359302"
     exon            1..164
                     /gene="Ly49i7"
                     /inference="alignment:Splign:2.1.0"
     CDS             53..871
                     /gene="Ly49i7"
                     /note="T-cell surface glycoprotein YE1/48-like; killer
                     cell lectin-like receptor 5-like; immunoreceptor Ly49i7"
                     /codon_start=1
                     /product="Ly49 inhibitory receptor 7"
                     /protein_id="NP_001009500.1"
                     /db_xref="GeneID:494210"
                     /db_xref="RGD:1359302"
                     /translation="MSEQEVTYSSLRFSKSSRLHNQVKPEETRGPREAGHRECYVPWH
                     LIVIALGILCTLLLVTVAVLVTNIFQYSQENHELQETLNQHNCSAMQNDIDLKEEMLR
                     KKAIECSPGNDLLELLNREQNRWYSKTKTVINSLQHTSNEIETHWFCYGIKCYYFIKD
                     RKTWHGCKRICQNSNLSLLKIDDEDERKFLQQQVIPDNYWIGLSYEKEKNKWAWIENG
                     PSELASNTKIFNERDGACVFLSKTKLDSIDCNNLYSCICGKRLNKFPDLLFNEC"
     exon            165..254
                     /gene="Ly49i7"
                     /inference="alignment:Splign:2.1.0"
     exon            255..470
                     /gene="Ly49i7"
                     /inference="alignment:Splign:2.1.0"
     exon            471..613
                     /gene="Ly49i7"
                     /inference="alignment:Splign:2.1.0"
     exon            614..717
                     /gene="Ly49i7"
                     /inference="alignment:Splign:2.1.0"
     exon            718..873
                     /gene="Ly49i7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaatcactca aggacatatt ttaacagaga atatccccta taaactccca aaatgagtga
       61 acaggaggtc acttattcaa gtctgagatt ttctaaatct tcacggctgc ataaccaagt
      121 gaagcctgag gagactagag ggcccagaga agctggccac agagagtgtt atgtcccgtg
      181 gcacctgatt gtgatagctt tgggaatcct ctgtaccctt cttctggtaa ctgttgcagt
      241 gttggtgaca aacatttttc agtatagtca agagaatcat gaactgcagg aaacactaaa
      301 ccaacacaac tgcagtgcca tgcaaaatga catcgactta aaggaagaaa tgctgagaaa
      361 aaaggcgata gagtgtagtc caggcaatga tcttctggaa ttgctcaaca gagaacagaa
      421 cagatggtac agcaaaacca agactgtcat aaattcctta caacacacaa gcaacgaaat
      481 tgaaacacac tggttctgct acggtataaa atgttattat ttcatcaagg acagaaaaac
      541 atggcatgga tgtaaacgga tctgccagaa ttccaattta tcccttctga agatagatga
      601 tgaggatgaa aggaagttcc ttcagcaaca ggttatccca gacaattact ggattggatt
      661 gtcatatgag aaagaaaaaa ataaatgggc atggattgaa aatggaccat ctgaacttgc
      721 ttcaaacaca aagatattca atgaaaggga tggagcttgt gtattcttat ctaaaacaaa
      781 actagacagt attgactgta ataatttata cagctgtatt tgtgggaaga gattgaataa
      841 attccctgat ttactcttca atgaatgtta aag
//
