LOCUS       XM_039100987            5146 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus leucine zipper protein 2 (Luzp2),
            transcript variant X1, mRNA.
ACCESSION   XM_039100987
VERSION     XM_039100987.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100987.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5146
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5146
                     /gene="Luzp2"
                     /note="leucine zipper protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     mRNAs, 18 ESTs, 5 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     51 samples with support for all annotated introns"
                     /db_xref="GeneID:100910839"
                     /db_xref="RGD:6496163"
     CDS             702..1739
                     /gene="Luzp2"
                     /codon_start=1
                     /product="leucine zipper protein 2 isoform X1"
                     /protein_id="XP_038956915.1"
                     /db_xref="GeneID:100910839"
                     /db_xref="RGD:6496163"
                     /translation="MKFNAAHYLLPLLPALVLSTRQDYEELEKQLKEVFKERSTVLRQ
                     LTKTSRELDGIKVNLQSLKNDEQSSKTDVQKLLELGQKQREEMKSLQEALQNQLKETS
                     EKAEKHQATINFLKTEVERKSKMIRDLQNENKSLKNKLLSGSKLCGIHAEESKKIQAQ
                     LKELRYGKKDLLFKAQQLTELEQKLAVAKNELEKAALDRESQMKAMKETVQLCLSSVF
                     RDQPPPLSLFPSNPTQMLHPPRTIASRIPETRTKSKPQQSSPGHHDSSQVQATKEESR
                     RTTVCGTQDEGSSCLAKHEEGPKSNNTAESELTTQKLQMPLCSECEEKKVPEKTSASF
                     DGTPAREEKLL"
ORIGIN      
        1 agagaggaag acgtggacgc accagaaccc agagccgcgg actttgtgtt ggttctggtt
       61 cctttctgtg ctagagaccc ctaacctcat ctgggtagct ggcctctggt gtgcatgagc
      121 tgctgctcca ctccatccgc agcaggcaag ccattacgca tctaatcaga gcagtatttt
      181 aagcttgctt actctccaag caacatctct gcaaaagcaa gctagtgaga gacgcctgct
      241 ctggacccta aagagtctgg agtccttccc agcgaattgt ctctcaccct gcggagcacg
      301 ccagctcaat tactggagaa agaggttggt ccttgccacc accctcccct tctgtcttca
      361 gtaggagcgg agaagaggag atccgctcca gtgcgcaccg gagtgaccaa gtacagctgg
      421 ctaccagggc agcgacctgg acgtgggtcc tttcctcctc ccgcggctac acccgccctg
      481 tgcgctttga gcacagcgct ggactatccc ggcagggctc ccgggtgaca tcactcctga
      541 agatactcgc actctggtcc ttgcctttaa gaagcctcta tccgtgtctt tgtgcgtctc
      601 tgaagagggc tccgagcttc cgagcaggac gctgagcagc aactgaccag aggaagcaaa
      661 ggagcagggt ccagtggagg agtacacgag ctggcggcga catgaaattc aacgctgcac
      721 actacctgct gcccctgctg ccagcacttg tcctcagcac cagacaggac tatgaagagc
      781 tagagaagca gctgaaggaa gtctttaagg aacgtagcac ggtcctgcgg cagctgacaa
      841 agacatccag ggaactggac gggatcaaag tcaaccttca gtctttgaaa aatgatgagc
      901 aatcctccaa aactgatgtt cagaagcttc tagagttagg ccagaaacaa agggaagaaa
      961 tgaagtctct ccaggaagcc ctgcagaatc agcttaaaga gacatctgag aaagccgaga
     1021 aacaccaggc cacaattaat tttttgaaga ctgaagtgga aagaaagagc aaaatgatcc
     1081 gtgacttaca gaatgagaat aaaagtttga aaaacaaatt gttgtcagga agcaagctgt
     1141 gtgggattca tgcagaagag tccaaaaaaa tccaagcaca gctgaaagag ctccgttacg
     1201 ggaagaaaga cttgttattt aaggcccaac agctcactga actggaacaa aagttagctg
     1261 tagccaaaaa tgaacttgag aaagcagctc ttgacaggga atcacagatg aaagcaatga
     1321 aagagaccgt acaactctgc ttgtcatcag ttttccgtga tcagcctcct cctttgagtc
     1381 tcttcccatc aaatccaacc cagatgttac atccacccag gacaattgct tccaggattc
     1441 cagaaacaag gacaaaaagc aagccacaac aaagttctcc aggacaccat gacagctctc
     1501 aagttcaggc aacaaaagaa gagagtagga ggaccactgt gtgtggcact caagatgagg
     1561 gtagttcctg tttggcgaag catgaggagg gtcccaaaag taacaacact gcagaatcag
     1621 agctcacaac acagaaatta caaatgcctc tttgttctga gtgtgaagag aaaaaagttc
     1681 cggaaaaaac atcagccagt ttcgatggga ctccagctag agaagaaaag ctactgtaat
     1741 caggaggcat gggattcaaa gctttcccgc catcaatatg ttttagagta caggcttgat
     1801 gggaatacca cgtttctaaa gcatgcaact tttacaaaac tttatgtaac tttataatgg
     1861 ggactacaaa atttccaaaa gattccaggc tgatcgtgaa gcttagcaat aatctgatga
     1921 aaaggatttc ttcacttaca cgtatctaac tgtcttctct aaaatcaccc agtataaatt
     1981 gatctgtttt caactaaata caactgcaac attttttttg gtctttgtgt agatatctag
     2041 tacttctaag gtctagttgg tacctacaac tggcagatga tcaactatga gtcctggtgt
     2101 tcttaaaatc caaattgcaa gcatatgaag gtttggttca cagttaccat ctggtgtcat
     2161 ttcccccaaa tttggaattt gcagaccaga atacattatt ttagatattt attgcttggc
     2221 tcattacatt gacttaataa ccatttgata taaattgtgc ccagttaatt ctgttaatga
     2281 taaatcagtt accagagagc attagttagt tttaatatga tatatgcata caaggttttt
     2341 cagttttaga atgaatgaca gctatctttc atagcgtttt ttgaatttta aaaccttctt
     2401 tgtgcatatt cactgatact gtttcaagat gtgaatcaag ctatctgaag tgccagtttt
     2461 atttcattct gctattaagt gatacaacgt aagatgggaa attttctaaa ttattaacat
     2521 gcaaggtgtc catagatatt ttagaatgga catttgatta aagcaggata acatggaata
     2581 atttttaagc aatgttgttt tagctttgaa gataggattt tatatgagaa tattatcatt
     2641 tatcaaaaga accaggctct ggcataatta cagcatagtt cctaatcaag aacgatagac
     2701 aaataaatta taacatatgc aacacatcta cttggcagat acaaactgac caatggatga
     2761 tgtcagggag tctacactca ctgggtacat tcacttctgt tggttaaaca cactctgaaa
     2821 gtacaggaat aaaaaataaa accactggct gtatagaatt aatatgctaa gccccaaata
     2881 acacctttag agaacatatc ccagaataat aaaaaagaat taaagaatta ggtcagtagg
     2941 acttaatttc tagaatccaa tgccatgtat gtgctatatg caaagaggtg tattgagctc
     3001 tcgaactgga taaactgatg gcagagaaag gaactccgcc atgcattagt tctacatgca
     3061 aagtactttt gcggattcta tcagcctttc cactcctaaa agaaaagata aggctggaaa
     3121 cgacccaact gtccctcaac cgaagaatgg atgcagaaaa tgtgattcat ttatacaatg
     3181 gcatactata gtaagccact gaaaactaac attccttaac tccagttcaa gggggatctg
     3241 atggcccctt gtagcctctg tgggcatcaa gaattcactt agtgcacaaa aatacatgtg
     3301 gaaagaacag ccgtgtacac tttaataaat ctgtggtcaa ttttttttaa taaaagaatt
     3361 cacggggctg gggatttagc tcagtggtag agcgcttacc taggaagcgc aaggccctgg
     3421 gttcggtccc cagctccgga aaaaagaacc aaaaaaataa ataaataaat aaataaaaga
     3481 attcacagat ttttatttaa aagatgaact gaccaagata aaatataaga tcaggagaca
     3541 tgtccagttc caaatcactc tactgcagtt tcatacacta ttaagttctc ttgatagact
     3601 aacacattta tacttctcta ttgctttttc ttttgaagca aaatcattct ttgaagcaac
     3661 aaaaacaatg tgtcaagttg ggctcaaaat taatacaaag tggattatga ctttgacctg
     3721 tatatcctcc tgcctctatt ccccaagggc tgagagtttc agcctctcac gatcactaca
     3781 gcaatgaaaa ctactagttt ggttttaatt taagattgcc tttccactct tatctcggcc
     3841 attgatttcc tgcctcatcc ctgtggatcc cacaggatgt tagccacttg accttcccat
     3901 ggcacgttgt gagtatctgt gactcctcgg taggaatgac tggataagga gttccaagtt
     3961 ggagcaacat tgttttccag ttttttgttt tgtctttggt ttaacttcct gttctagaat
     4021 gtgataacat agtcggtttt attctctccc tcttggaatg ataaaatggg ttttaatcca
     4081 tagggtaaaa tgccttccta aaatgtatgc attcttgtgt atctacaggt ttactctagg
     4141 ttgtgtgtca taatatttac tcctatattt gaaagagaca ctgtaagagc aggaggtttt
     4201 ttcctaacca cttttgagga acattacaga agttcattta gtagtttgat agcattgctt
     4261 ttaatatgat ttgaggtttt tctttaatta atgtgttttt tgtctctcct agccttttcc
     4321 ttgctttgaa attggaatca aaatttttaa actattttcc tcacctgtct tctacccttc
     4381 ttaactacca actttacact agatatcgtt tgaagaatta acatgaagac actgaccatt
     4441 ctcacctgga aagaatatta tccaatatat ttacaataca tggtgtgatt ctgttctata
     4501 cttgcaatgt taagtgaaga attacaactt ggagtttaca cactgtccat tgatggctgt
     4561 tgaggacttc cccatgtttt ctaatgaaat aacctattta atatgtcctt ccacaacaga
     4621 gaacaaattt ctctatttta taatattata acaacaactc aatttaaagt gtgaatcaaa
     4681 gacaatgtat tcatttgtaa attagaaaac ttttgaactc tgtctttcct tttatgtaca
     4741 taaactatgt caataaacta gtgcctcaga cctgtgagcc ctaatgaaca ctggctgtgt
     4801 ctatcgatta ggtcatgccc agaagaagat ggtataaaaa tttcttcaaa cacctaaatg
     4861 tggaaaatac cagtggctga ctttgatttt gtacagcttg actttgattt tgagcagcta
     4921 attagcatag tattgctgtt tcactcacag ttttgtttca tacaaacaca ctgaattacc
     4981 agctcaatac agttgtggtt tcgggggggg tgttttgttt tgctatgttt ttgtttgttt
     5041 gttttgtatt ttttgtttgt ttttgagttt gtggagcaga cgtttgctgt tttaggtgga
     5101 caagatgtat aaatggactg aaattaaatt tgtgaatttg ctgtaa
//
