LOCUS       NM_001014157            1743 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus LTV1 ribosome biogenesis factor (Ltv1), mRNA.
ACCESSION   NM_001014157 XM_341730
VERSION     NM_001014157.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1743)
  AUTHORS   Zemp,I., Wandrey,F., Rao,S., Ashiono,C., Wyler,E., Montellese,C.
            and Kutay,U.
  TITLE     CK1delta and CK1epsilon are components of human 40S subunit
            precursors required for cytoplasmic 40S maturation
  JOURNAL   J Cell Sci 127 (Pt 6), 1242-1253 (2014)
   PUBMED   24424021
REFERENCE   2  (bases 1 to 1743)
  AUTHORS   Panse,V.G. and Johnson,A.W.
  TITLE     Maturation of eukaryotic ribosomes: acquisition of functionality
  JOURNAL   Trends Biochem Sci 35 (5), 260-266 (2010)
   PUBMED   20137954
  REMARK    Review article
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079397.1.
            
            On Apr 20, 2005 this sequence version replaced XM_341730.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079397.1, FQ214000.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1743
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1p13"
     gene            1..1743
                     /gene="Ltv1"
                     /gene_synonym="RGD1311264"
                     /note="LTV1 ribosome biogenesis factor"
                     /db_xref="GeneID:361452"
                     /db_xref="RGD:1311264"
     exon            1..21
                     /gene="Ltv1"
                     /gene_synonym="RGD1311264"
                     /inference="alignment:Splign:2.1.0"
     CDS             19..1431
                     /gene="Ltv1"
                     /gene_synonym="RGD1311264"
                     /note="LTV1 homolog"
                     /codon_start=1
                     /product="protein LTV1 homolog"
                     /protein_id="NP_001014179.1"
                     /db_xref="GeneID:361452"
                     /db_xref="RGD:1311264"
                     /translation="MPHRKKKPFIEKKKAVSFHLVHRSQRDPLAADETAPQRVLVPTQ
                     KVNDEERRAEQRKYGVFFDDDYDYLQHLREPSGPAELIPSSTPSTYSSRGEEDTSVFP
                     STGIKLPSSVFASEFEEDVGLLNKAAPVSGPRLDFDPDIVAALDDDFDFDDPENLLED
                     DFILQASKPTGGEGMDMLESDGDDGNEWEDMDEGGSDGCGSTGPLSDGGDISAPGSPR
                     EAMKKHLFWEEETKSRFTEYSMTSSVMRRNEQLTLHDERFEKFYEQYDDVEIGALDNA
                     ELEGTIQVDSSRLQEVLNDYYKEKAENCVKLNTLEPFEDQDLAANELDESEKEETVTV
                     VLEEAREKWDCESICSTYSNLYNHPQLIKYEPKPKQIHLSSKTGIPLHVLPKKGLTAK
                     QVERMQMINSSDLPKVSTQPRLKTESKEDKKARKQAIKEERKERRVEKKANKLAFKLE
                     KRRQEKELLNLKKNVEGLKL"
     exon            22..153
                     /gene="Ltv1"
                     /gene_synonym="RGD1311264"
                     /inference="alignment:Splign:2.1.0"
     exon            154..324
                     /gene="Ltv1"
                     /gene_synonym="RGD1311264"
                     /inference="alignment:Splign:2.1.0"
     exon            325..412
                     /gene="Ltv1"
                     /gene_synonym="RGD1311264"
                     /inference="alignment:Splign:2.1.0"
     exon            413..551
                     /gene="Ltv1"
                     /gene_synonym="RGD1311264"
                     /inference="alignment:Splign:2.1.0"
     exon            552..798
                     /gene="Ltv1"
                     /gene_synonym="RGD1311264"
                     /inference="alignment:Splign:2.1.0"
     exon            799..926
                     /gene="Ltv1"
                     /gene_synonym="RGD1311264"
                     /inference="alignment:Splign:2.1.0"
     exon            927..1066
                     /gene="Ltv1"
                     /gene_synonym="RGD1311264"
                     /inference="alignment:Splign:2.1.0"
     exon            1067..1119
                     /gene="Ltv1"
                     /gene_synonym="RGD1311264"
                     /inference="alignment:Splign:2.1.0"
     exon            1120..1320
                     /gene="Ltv1"
                     /gene_synonym="RGD1311264"
                     /inference="alignment:Splign:2.1.0"
     exon            1321..1716
                     /gene="Ltv1"
                     /gene_synonym="RGD1311264"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggagtccct gcctcatcat gcctcacaga aagaaaaagc cctttataga gaagaagaaa
       61 gctgtgtctt ttcacctggt ccaccggagc cagagagacc ccttggcagc agatgaaacc
      121 gcaccgcaga gagttctggt gcctacacaa aaggtaaatg atgaggaaag gcgagcagag
      181 cagaggaagt acggcgtgtt cttcgatgat gactacgact acttgcaaca cctgagggag
      241 ccatccggcc ccgcagagct tattcccagc tccaccccca gcacctactc cagccgtggg
      301 gaagaagaca cctcggtgtt cccgagcacg gggattaagt tgccttcatc agtgtttgcg
      361 tcagagtttg aagaagatgt tggactgtta aacaaagcag ctccagtttc aggacctcga
      421 ctagatttcg atccagacat tgttgcagct cttgatgatg attttgactt tgatgaccca
      481 gaaaacctcc ttgaagatga ctttattctt caagccagca agccgacagg aggagagggg
      541 atggacatgc tggagtctga cggagacgat ggcaatgagt gggaagacat ggacgagggc
      601 gggagcgatg gctgtggctc tacaggccct ctgtcagatg gaggtgacat atctgccccc
      661 ggctcccctc gggaagccat gaaaaagcac ctgttttggg aagaggaaac caaaagccgt
      721 ttcacagagt actccatgac ctcctcagtc atgaggagaa atgaacagct tactctacat
      781 gatgagaggt ttgagaagtt ttatgaacag tatgatgacg ttgaaattgg agctctggat
      841 aatgcggagt tggaaggcac cattcaagtg gacagcagtc ggctgcagga ggttctgaac
      901 gactactaca aggagaaggc agagaactgt gtaaagttga atactcttga gccttttgag
      961 gatcaagatc tggcagcaaa tgagctcgat gagtctgaga aggaagagac cgttactgtg
     1021 gttctcgagg aagccagaga gaagtgggac tgtgaatcca tctgcagtac atactccaat
     1081 ttatacaacc accctcagct catcaagtat gaaccaaaac ccaaacagat ccacctgtcc
     1141 tctaagacgg gaatacctct ccatgtccta cctaagaaag gcctcacagc aaagcaggtc
     1201 gaacggatgc agatgatcaa cagcagtgat ctgcccaagg tgtccaccca gccccgtctc
     1261 aaaactgaga gcaaagagga taaaaaagcc agaaagcagg ccataaagga ggagcggaag
     1321 gaacgaagag ttgaaaagaa agctaacaag ctagcattca aactggagaa aagaaggcaa
     1381 gaaaaggagc tgctgaactt gaagaaaaac gttgaaggtc taaaactgta gatgtgggac
     1441 attcataagt tttatttcca tgtcagcagt cttcgttatg ctccagaatt aacaggatct
     1501 aaagaggggt gagcttctcc ctgctgtttt tatatgcaaa tagctgagat aaatagagta
     1561 tttgtatttt catacaggca aggttctctt gtcagctatc atcttgtaaa tactataatg
     1621 ttgtaagttt aatattatac gcttatattt cttctgaaat aaatgacttc atgaaagtca
     1681 aatgtttgga taaattaaag gaaaatgtct tcataaaaaa aaaaaaaaaa aaaaaaaaaa
     1741 aaa
//
