LOCUS       XM_017589434            1458 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus lymphocyte-specific protein 1 (Lsp1),
            transcript variant X9, mRNA.
ACCESSION   XM_017589434
VERSION     XM_017589434.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_017589434.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1458
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1458
                     /gene="Lsp1"
                     /note="lymphocyte-specific protein 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 19
                     ESTs, 7 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 20 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:361680"
                     /db_xref="RGD:1306133"
     CDS             91..1077
                     /gene="Lsp1"
                     /codon_start=1
                     /product="lymphocyte-specific protein 1 isoform X7"
                     /protein_id="XP_017444923.1"
                     /db_xref="GeneID:361680"
                     /db_xref="RGD:1306133"
                     /translation="MGSRMWELWSKCIRGRGRKRLTTQWREEDEEEAAREQRQRERER
                     QLQDQDKDEEDEGGHFLEQPGQQALVSLKSSELDEDEGFGDWSQKQEPPRQQSWENEG
                     TAEGSEPSPSESAEEKQTEDSSHQAKVHLEESNLSHSDPNIEDDVGGSGETEEHLISH
                     QARTPSPLALEDTAELSSPPLSPTVKLADRTESLNRSIQKSNSVKKSQPTLPISTIDE
                     RLQQYTQATESAGRTPKLSRQPSIELPSMAVASTKTLWETGEVQTQSASKTPSCQDIV
                     AGDMSKKSLWEQKGGSKISSTIKSTPSGKRYKFVATGHGKYEKVLVDEGSAP"
ORIGIN      
        1 aggccactgg ggcctgctct gtcctgtccc aggaacaggt ctcagaagag agtgtcaggt
       61 cttggggaca ggtcaaaggc tagcagcctc atggggagca ggatgtggga gctgtggtcc
      121 aagtgtataa gaggaagggg aagaaagagg ctcacaactc agtggagaga agaagatgaa
      181 gaagaggccg cccgtgagca gcgccaacgg gagcgagaga ggcagctgca ggaccaggac
      241 aaagatgaag aagatgaagg tggccatttc ctggaacagc cagggcagca ggcactcgtt
      301 agcctgaagt cctctgaact ggatgaagat gagggttttg gtgactggtc tcaaaagcag
      361 gagccaccaa ggcagcaatc ctgggagaat gaggggactg cagaggggtc ggaaccctct
      421 ccaagtgaga gtgcagagga gaaacaaaca gaggacagtt ctcaccaagc taaagtccac
      481 ttggaggagt caaacctgag ccacagtgac cccaatatag aggatgatgt cgggggttct
      541 ggggagacag aagagcatct gataagtcat caggccagga cccccagccc tttggccttg
      601 gaagacactg ctgagctgag ctcacctccc ctgagcccta ccgtcaaact ggctgatagg
      661 acagaatccc tgaaccgctc cattcaaaag agcaacagtg tgaagaagtc tcaaccaacc
      721 ttgcccattt ccaccatcga tgagcgcctg cagcagtaca cccaggccac tgagtctgct
      781 ggccgaactc ccaagctgtc ccgccagccc tccatagagc tgcccagcat ggctgtagcc
      841 agtaccaaga ctctttggga gacaggagag gtgcagactc agtctgcttc caagacaccc
      901 tcctgccagg atatagtagc tggagacatg agcaagaaaa gtctgtggga acagaaagga
      961 ggctccaaga tctcatccac catcaagagc accccatctg gaaagaggta caagtttgtg
     1021 gccactggac acgggaagta cgagaaagtg ctcgtggatg agggctcagc accatagacc
     1081 acgtatgcat cctggataga ctccaaccag atgccactcc cagccctgac caagaaattg
     1141 cttcctgttg ccagtctggc ccgctctcct gcctccagca acccagctgc cacttgcctc
     1201 tcctcttgct actggaccct ccatcttcta tgccctctca tcctctgacc aaccctccaa
     1261 ctctgcttct catcatcagc taaagggacc agcccataga ggagccgaga gctcccaagg
     1321 aaggatggag gagagaaggc aagcatccca accagatcca aggggtaact gtccccatgc
     1381 tgaatgctca ggactccaag tcctgccctg tttatggatc cttcgttttg tgtaataaag
     1441 tgcattgagt gtccccta
//
